Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 71 |
| AciI | CCGC | 3 cut(s) | 71, 141, 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 166 |
| AgsI | TTSAA | 2 cut(s) | 12, 272 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 73, 105 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 40 |
| AspS9I | GGNCC | 1 cut(s) | 169 |
| AvaII | GGWCC | 1 cut(s) | 169 |
| BfaI | CTAG | 2 cut(s) | 102, 186 |
| BisI | GCNGC | 1 cut(s) | 72 |
| BlsI | GCNGC | 1 cut(s) | 73 |
| Bme18I | GGWCC | 1 cut(s) | 169 |
| BmgT120I | GGNCC | 1 cut(s) | 169 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 166 |
| Bse1I | ACTGG | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BseMII | CTCAG | 1 cut(s) | 317 |
| BseNI | ACTGG | 1 cut(s) | 219 |
| BseYI | CCCAGC | 1 cut(s) | 246 |
| BslFI | GGGAC | 1 cut(s) | 314 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 166 |
| BsmFI | GGGAC | 1 cut(s) | 314 |
| BsmI | GAATGC | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 196 |
| BspACI | CCGC | 3 cut(s) | 71, 141, 308 |
| BspCNI | CTCAG | 1 cut(s) | 316 |
| BsrBI | CCGCTC | 1 cut(s) | 71 |
| BsrI | ACTGG | 1 cut(s) | 219 |
| BssMI | GATC | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 1 cut(s) | 257 |
| BstDEI | CTNAG | 1 cut(s) | 303 |
| BstKTI | GATC | 1 cut(s) | 199 |
| BstMBI | GATC | 1 cut(s) | 196 |
| CaiI | CAGNNNCTG | 1 cut(s) | 40 |
| Cfr13I | GGNCC | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 290 |
| CviJI | RGCY | 3 cut(s) | 38, 236, 326 |
| CviKI_1 | RGCY | 3 cut(s) | 38, 236, 326 |
| DdeI | CTNAG | 1 cut(s) | 303 |
| DpnI | GATC | 1 cut(s) | 198 |
| DpnII | GATC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 1 cut(s) | 169 |
| FaeI | CATG | 1 cut(s) | 293 |
| FaiI | YATR | 4 cut(s) | 65, 201, 291, 334 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 73, 105 |
| FaqI | GGGAC | 1 cut(s) | 314 |
| FatI | CATG | 1 cut(s) | 289 |
| FauI | CCCGC | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 1 cut(s) | 72 |
| Fsp4HI | GCNGC | 1 cut(s) | 72 |
| FspBI | CTAG | 2 cut(s) | 102, 186 |
| GluI | GCNGC | 1 cut(s) | 72 |
| GsaI | CCCAGC | 1 cut(s) | 250 |
| Hin1II | CATG | 1 cut(s) | 293 |
| HinfI | GANTC | 3 cut(s) | 98, 241, 293 |
| Hpy166II | GTNNAC | 3 cut(s) | 87, 223, 287 |
| Hpy188I | TCNGA | 2 cut(s) | 154, 196 |
| Hpy8I | GTNNAC | 3 cut(s) | 87, 223, 287 |
| HpyAV | CCTTC | 2 cut(s) | 75, 307 |
| HpyCH4III | ACNGT | 1 cut(s) | 257 |
| HpyCH4V | TGCA | 2 cut(s) | 51, 59 |
| HpyF3I | CTNAG | 1 cut(s) | 303 |
| Hsp92II | CATG | 1 cut(s) | 293 |
| Kzo9I | GATC | 1 cut(s) | 196 |
| LmnI | GCTCC | 2 cut(s) | 68, 93 |
| LpnPI | CCDG | 8 cut(s) | 20, 29, 29, 60, 200, 218, 232, 290 |
| MaeI | CTAG | 2 cut(s) | 102, 186 |
| MaeIII | GTNAC | 1 cut(s) | 251 |
| MalI | GATC | 1 cut(s) | 198 |
| MbiI | CCGCTC | 1 cut(s) | 71 |
| MboI | GATC | 1 cut(s) | 196 |
| MboII | GAAGA | 2 cut(s) | 284, 326 |
| MluCI | AATT | 1 cut(s) | 260 |
| MnlI | CCTC | 2 cut(s) | 71, 192 |
| MseI | TTAA | 2 cut(s) | 174, 264 |
| Mva1269I | GAATGC | 1 cut(s) | 28 |
| NdeII | GATC | 1 cut(s) | 196 |
| NlaIII | CATG | 1 cut(s) | 293 |
| NmuCI | GTSAC | 1 cut(s) | 251 |
| PctI | GAATGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 3 cut(s) | 98, 241, 293 |
| PkrI | GCNGC | 1 cut(s) | 73 |
| PspFI | CCCAGC | 1 cut(s) | 246 |
| PspPI | GGNCC | 1 cut(s) | 169 |
| PstNI | CAGNNNCTG | 1 cut(s) | 40 |
| SaqAI | TTAA | 2 cut(s) | 174, 264 |
| SatI | GCNGC | 1 cut(s) | 72 |
| Sau3AI | GATC | 1 cut(s) | 196 |
| Sau96I | GGNCC | 1 cut(s) | 169 |
| SetI | ASST | 3 cut(s) | 57, 86, 194 |
| SinI | GGWCC | 1 cut(s) | 169 |
| Sse9I | AATT | 1 cut(s) | 260 |
| SsiI | CCGC | 3 cut(s) | 71, 141, 308 |
| SspMI | CTAG | 2 cut(s) | 102, 186 |
| TaaI | ACNGT | 1 cut(s) | 257 |
| TasI | AATT | 1 cut(s) | 260 |
| TauI | GCSGC | 1 cut(s) | 74 |
| TfiI | GAWTC | 3 cut(s) | 98, 241, 293 |
| Tru1I | TTAA | 2 cut(s) | 174, 264 |
| Tru9I | TTAA | 2 cut(s) | 174, 264 |
| TseFI | GTSAC | 1 cut(s) | 251 |
| Tsp45I | GTSAC | 1 cut(s) | 251 |
| TspDTI | ATGAA | 2 cut(s) | 35, 306 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| VpaK11BI | GGWCC | 1 cut(s) | 169 |
| XspI | CTAG | 2 cut(s) | 102, 186 |