ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 154 |
| AclWI | GGATC | 1 cut(s) | 304 |
| AfaI | GTAC | 1 cut(s) | 177 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjnI | CCWGG | 1 cut(s) | 66 |
| AluBI | AGCT | 1 cut(s) | 9 |
| AluI | AGCT | 1 cut(s) | 9 |
| Alw26I | GTCTC | 3 cut(s) | 44, 47, 251 |
| AlwI | GGATC | 1 cut(s) | 304 |
| AsuHPI | GGTGA | 2 cut(s) | 177, 310 |
| BauI | CACGAG | 1 cut(s) | 189 |
| BbsI | GAAGAC | 1 cut(s) | 201 |
| BccI | CCATC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 68 |
| BcoDI | GTCTC | 3 cut(s) | 44, 47, 251 |
| BfaI | CTAG | 3 cut(s) | 20, 96, 122 |
| Bme1390I | CCNGG | 1 cut(s) | 68 |
| BmrFI | CCNGG | 1 cut(s) | 68 |
| BmsI | GCATC | 2 cut(s) | 52, 265 |
| BoxI | GACNNNNGTC | 1 cut(s) | 150 |
| BpiI | GAAGAC | 1 cut(s) | 201 |
| BpuEI | CTTGAG | 1 cut(s) | 42 |
| BsaI | GGTCTC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 2 cut(s) | 66, 205 |
| BseBI | CCWGG | 1 cut(s) | 68 |
| BseDI | CCNNGG | 2 cut(s) | 66, 205 |
| BseMII | CTCAG | 1 cut(s) | 262 |
| BsmAI | GTCTC | 3 cut(s) | 44, 47, 251 |
| Bso31I | GGTCTC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 296 |
| BspCNI | CTCAG | 1 cut(s) | 261 |
| BspPI | GGATC | 1 cut(s) | 304 |
| BspTNI | GGTCTC | 1 cut(s) | 44 |
| BssECI | CCNNGG | 2 cut(s) | 66, 205 |
| BssMI | GATC | 1 cut(s) | 296 |
| BssSI | CACGAG | 1 cut(s) | 189 |
| Bst2BI | CACGAG | 1 cut(s) | 189 |
| Bst2UI | CCWGG | 1 cut(s) | 68 |
| BstDEI | CTNAG | 1 cut(s) | 248 |
| BstKTI | GATC | 1 cut(s) | 299 |
| BstMAI | GTCTC | 3 cut(s) | 44, 47, 251 |
| BstMBI | GATC | 1 cut(s) | 296 |
| BstNI | CCWGG | 1 cut(s) | 68 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 150 |
| BstSCI | CCNGG | 1 cut(s) | 66 |
| BstV2I | GAAGAC | 1 cut(s) | 201 |
| BstX2I | RGATCY | 1 cut(s) | 296 |
| BstYI | RGATCY | 1 cut(s) | 296 |
| Csp6I | GTAC | 1 cut(s) | 176 |
| CviJI | RGCY | 1 cut(s) | 9 |
| CviKI_1 | RGCY | 1 cut(s) | 9 |
| CviQI | GTAC | 1 cut(s) | 176 |
| DdeI | CTNAG | 1 cut(s) | 248 |
| DpnI | GATC | 1 cut(s) | 298 |
| DpnII | GATC | 1 cut(s) | 296 |
| Eco31I | GGTCTC | 1 cut(s) | 44 |
| EcoRII | CCWGG | 1 cut(s) | 66 |
| FaiI | YATR | 4 cut(s) | 161, 261, 270, 328 |
| FblI | GTMKAC | 1 cut(s) | 154 |
| FspBI | CTAG | 3 cut(s) | 20, 96, 122 |
| HincII | GTYRAC | 2 cut(s) | 73, 155 |
| HindII | GTYRAC | 2 cut(s) | 73, 155 |
| HinfI | GANTC | 2 cut(s) | 55, 288 |
| HphI | GGTGA | 2 cut(s) | 177, 310 |
| Hpy166II | GTNNAC | 4 cut(s) | 73, 155, 176, 185 |
| Hpy188I | TCNGA | 4 cut(s) | 87, 115, 133, 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 59, 250 |
| Hpy8I | GTNNAC | 4 cut(s) | 73, 155, 176, 185 |
| Hpy99I | CGWCG | 2 cut(s) | 156, 159 |
| HpyAV | CCTTC | 1 cut(s) | 223 |
| HpyCH4IV | ACGT | 3 cut(s) | 128, 147, 157 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 278 |
| HpyF3I | CTNAG | 1 cut(s) | 248 |
| HpySE526I | ACGT | 3 cut(s) | 128, 147, 157 |
| Kzo9I | GATC | 1 cut(s) | 296 |
| LpnPI | CCDG | 4 cut(s) | 53, 80, 235, 252 |
| LweI | GCATC | 2 cut(s) | 52, 265 |
| MaeI | CTAG | 3 cut(s) | 20, 96, 122 |
| MaeII | ACGT | 3 cut(s) | 128, 147, 157 |
| MalI | GATC | 1 cut(s) | 298 |
| MboI | GATC | 1 cut(s) | 296 |
| MboII | GAAGA | 1 cut(s) | 206 |
| MflI | RGATCY | 1 cut(s) | 296 |
| MluCI | AATT | 1 cut(s) | 28 |
| MlyI | GAGTC | 2 cut(s) | 49, 297 |
| MmeI | TCCRAC | 1 cut(s) | 156 |
| MnlI | CCTC | 2 cut(s) | 200, 219 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| MspR9I | CCNGG | 1 cut(s) | 68 |
| MvaI | CCWGG | 1 cut(s) | 68 |
| NdeII | GATC | 1 cut(s) | 296 |
| NmeAIII | GCCGAG | 1 cut(s) | 230 |
| PleI | GAGTC | 2 cut(s) | 49, 296 |
| PpsI | GAGTC | 2 cut(s) | 49, 296 |
| PshAI | GACNNNNGTC | 1 cut(s) | 150 |
| Psp6I | CCWGG | 1 cut(s) | 66 |
| PspGI | CCWGG | 1 cut(s) | 66 |
| PsuI | RGATCY | 1 cut(s) | 296 |
| RsaI | GTAC | 1 cut(s) | 177 |
| RsaNI | GTAC | 1 cut(s) | 176 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SalI | GTCGAC | 1 cut(s) | 153 |
| Sau3AI | GATC | 1 cut(s) | 296 |
| SchI | GAGTC | 2 cut(s) | 49, 297 |
| ScrFI | CCNGG | 1 cut(s) | 68 |
| SetI | ASST | 7 cut(s) | 11, 131, 138, 150, 160, 166, 211 |
| SfaNI | GCATC | 2 cut(s) | 52, 265 |
| SgrDI | CGTCGACG | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| SmlI | CTYRAG | 1 cut(s) | 57 |
| SmoI | CTYRAG | 1 cut(s) | 57 |
| Sse9I | AATT | 1 cut(s) | 28 |
| SspI | AATATT | 1 cut(s) | 49 |
| SspMI | CTAG | 3 cut(s) | 20, 96, 122 |
| StyD4I | CCNGG | 1 cut(s) | 66 |
| TaiI | ACGT | 3 cut(s) | 131, 150, 160 |
| TaqI | TCGA | 2 cut(s) | 154, 168 |
| TasI | AATT | 1 cut(s) | 28 |
| TatI | WGTACW | 1 cut(s) | 175 |
| XmiI | GTMKAC | 1 cut(s) | 154 |
| XspI | CTAG | 3 cut(s) | 20, 96, 122 |