ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 380 |
| AfaI | GTAC | 1 cut(s) | 36 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AgsI | TTSAA | 2 cut(s) | 136, 202 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 236, 268 |
| AluBI | AGCT | 2 cut(s) | 53, 391 |
| AluI | AGCT | 2 cut(s) | 53, 391 |
| Alw21I | GWGCWC | 1 cut(s) | 224 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| Alw44I | GTGCAC | 1 cut(s) | 220 |
| ApaLI | GTGCAC | 1 cut(s) | 220 |
| ApoI | RAATTY | 1 cut(s) | 380 |
| AspLEI | GCGC | 1 cut(s) | 161 |
| BaeGI | GKGCMC | 1 cut(s) | 224 |
| BauI | CACGAG | 2 cut(s) | 105, 139 |
| Bbv12I | GWGCWC | 1 cut(s) | 224 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BfaI | CTAG | 1 cut(s) | 54 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BsaAI | YACGTR | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 2 cut(s) | 22, 207 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| Bse3DI | GCAATG | 1 cut(s) | 154 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 2 cut(s) | 22, 207 |
| BseGI | GGATG | 2 cut(s) | 183, 381 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseMI | GCAATG | 1 cut(s) | 154 |
| BseRI | GAGGAG | 2 cut(s) | 8, 187 |
| BseSI | GKGCMC | 1 cut(s) | 224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 224 |
| BsiWI | CGTACG | 1 cut(s) | 34 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| Bsp1286I | GDGCHC | 1 cut(s) | 224 |
| Bsp143I | GATC | 3 cut(s) | 64, 101, 186 |
| BspHI | TCATGA | 1 cut(s) | 76 |
| BsrDI | GCAATG | 1 cut(s) | 154 |
| BssECI | CCNNGG | 2 cut(s) | 22, 207 |
| BssMI | GATC | 3 cut(s) | 64, 101, 186 |
| BssSI | CACGAG | 2 cut(s) | 105, 139 |
| Bst2BI | CACGAG | 2 cut(s) | 105, 139 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| BstBAI | YACGTR | 1 cut(s) | 38 |
| BstC8I | GCNNGC | 1 cut(s) | 163 |
| BstF5I | GGATG | 2 cut(s) | 183, 381 |
| BstHHI | GCGC | 1 cut(s) | 161 |
| BstKTI | GATC | 3 cut(s) | 67, 104, 189 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 3 cut(s) | 64, 101, 186 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstSLI | GKGCMC | 1 cut(s) | 224 |
| BstSNI | TACGTA | 1 cut(s) | 38 |
| BtsCI | GGATG | 2 cut(s) | 183, 381 |
| Cac8I | GCNNGC | 1 cut(s) | 163 |
| CciI | TCATGA | 1 cut(s) | 76 |
| CfoI | GCGC | 1 cut(s) | 161 |
| Csp6I | GTAC | 1 cut(s) | 35 |
| CviAII | CATG | 1 cut(s) | 77 |
| CviJI | RGCY | 4 cut(s) | 53, 58, 196, 391 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 58, 196, 391 |
| CviQI | GTAC | 1 cut(s) | 35 |
| DpnI | GATC | 3 cut(s) | 66, 103, 188 |
| DpnII | GATC | 3 cut(s) | 64, 101, 186 |
| Eco105I | TACGTA | 1 cut(s) | 38 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 80 |
| FaiI | YATR | 5 cut(s) | 41, 78, 113, 299, 305 |
| FatI | CATG | 1 cut(s) | 76 |
| FokI | GGATG | 2 cut(s) | 190, 388 |
| FspBI | CTAG | 1 cut(s) | 54 |
| GlaI | GCGC | 1 cut(s) | 160 |
| HhaI | GCGC | 1 cut(s) | 161 |
| Hin1II | CATG | 1 cut(s) | 80 |
| Hin6I | GCGC | 1 cut(s) | 159 |
| HinP1I | GCGC | 1 cut(s) | 159 |
| HincII | GTYRAC | 1 cut(s) | 120 |
| HindII | GTYRAC | 1 cut(s) | 120 |
| HinfI | GANTC | 3 cut(s) | 4, 144, 230 |
| Hpy166II | GTNNAC | 3 cut(s) | 120, 222, 309 |
| Hpy188I | TCNGA | 1 cut(s) | 235 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 105 |
| Hpy8I | GTNNAC | 3 cut(s) | 120, 222, 309 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 37 |
| HpyCH4V | TGCA | 1 cut(s) | 222 |
| HpySE526I | ACGT | 2 cut(s) | 33, 37 |
| Hsp92II | CATG | 1 cut(s) | 80 |
| HspAI | GCGC | 1 cut(s) | 159 |
| Kzo9I | GATC | 3 cut(s) | 64, 101, 186 |
| LmnI | GCTCC | 1 cut(s) | 21 |
| LpnPI | CCDG | 4 cut(s) | 8, 35, 175, 311 |
| MaeI | CTAG | 1 cut(s) | 54 |
| MaeII | ACGT | 2 cut(s) | 33, 37 |
| MalI | GATC | 3 cut(s) | 66, 103, 188 |
| MboI | GATC | 3 cut(s) | 64, 101, 186 |
| MboII | GAAGA | 1 cut(s) | 256 |
| MhlI | GDGCHC | 1 cut(s) | 224 |
| MluCI | AATT | 4 cut(s) | 44, 85, 268, 380 |
| MlyI | GAGTC | 2 cut(s) | 13, 224 |
| MmeI | TCCRAC | 1 cut(s) | 234 |
| MnlI | CCTC | 7 cut(s) | 21, 29, 165, 168, 202, 220, 366 |
| MseI | TTAA | 1 cut(s) | 394 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| NdeII | GATC | 3 cut(s) | 64, 101, 186 |
| NlaIII | CATG | 1 cut(s) | 80 |
| NmeAIII | GCCGAG | 1 cut(s) | 232 |
| PagI | TCATGA | 1 cut(s) | 76 |
| PfeI | GAWTC | 1 cut(s) | 144 |
| Pfl23II | CGTACG | 1 cut(s) | 34 |
| PleI | GAGTC | 2 cut(s) | 12, 224 |
| PpsI | GAGTC | 2 cut(s) | 12, 224 |
| Ppu21I | YACGTR | 1 cut(s) | 38 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| PspLI | CGTACG | 1 cut(s) | 34 |
| RsaI | GTAC | 1 cut(s) | 36 |
| RsaNI | GTAC | 1 cut(s) | 35 |
| SaqAI | TTAA | 1 cut(s) | 394 |
| Sau3AI | GATC | 3 cut(s) | 64, 101, 186 |
| SchI | GAGTC | 2 cut(s) | 13, 224 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SduI | GDGCHC | 1 cut(s) | 224 |
| SetI | ASST | 6 cut(s) | 36, 40, 55, 318, 330, 393 |
| SnaBI | TACGTA | 1 cut(s) | 38 |
| Sse9I | AATT | 4 cut(s) | 44, 85, 268, 380 |
| SspMI | CTAG | 1 cut(s) | 54 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaiI | ACGT | 2 cut(s) | 36, 40 |
| TaqI | TCGA | 1 cut(s) | 335 |
| TasI | AATT | 4 cut(s) | 44, 85, 268, 380 |
| TfiI | GAWTC | 1 cut(s) | 144 |
| Tru1I | TTAA | 1 cut(s) | 394 |
| Tru9I | TTAA | 1 cut(s) | 394 |
| TspDTI | ATGAA | 7 cut(s) | 65, 93, 140, 194, 354, 359, 392 |
| TspGWI | ACGGA | 2 cut(s) | 141, 239 |
| VneI | GTGCAC | 1 cut(s) | 220 |
| XapI | RAATTY | 1 cut(s) | 380 |
| XspI | CTAG | 1 cut(s) | 54 |