Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 357, 363 |
| AcoI | YGGCCR | 1 cut(s) | 377 |
| AfaI | GTAC | 1 cut(s) | 240 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 332 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| AlwI | GGATC | 2 cut(s) | 357, 363 |
| AoxI | GGCC | 1 cut(s) | 377 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| AspLEI | GCGC | 3 cut(s) | 88, 303, 342 |
| AxyI | CCTNAGG | 1 cut(s) | 144 |
| BalI | TGGCCA | 1 cut(s) | 379 |
| BbvI | GCAGC | 1 cut(s) | 144 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BfoI | RGCGCY | 2 cut(s) | 304, 343 |
| BisI | GCNGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 1 cut(s) | 159 |
| BmsI | GCATC | 1 cut(s) | 256 |
| BoxI | GACNNNNGTC | 1 cut(s) | 387 |
| BsaJI | CCNNGG | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 332 |
| Bse21I | CCTNAGG | 1 cut(s) | 144 |
| Bse3DI | GCAATG | 2 cut(s) | 112, 302 |
| BseDI | CCNNGG | 1 cut(s) | 25 |
| BseGI | GGATG | 4 cut(s) | 6, 69, 223, 322 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BseMI | GCAATG | 2 cut(s) | 112, 302 |
| BseXI | GCAGC | 1 cut(s) | 144 |
| BshFI | GGCC | 1 cut(s) | 379 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BsnI | GGCC | 1 cut(s) | 379 |
| Bsp143I | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| BspANI | GGCC | 1 cut(s) | 379 |
| BspPI | GGATC | 2 cut(s) | 357, 363 |
| BspQI | GCTCTTC | 1 cut(s) | 213 |
| BsrDI | GCAATG | 2 cut(s) | 112, 302 |
| BssECI | CCNNGG | 1 cut(s) | 25 |
| BssMI | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| BssT1I | CCWWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 1 cut(s) | 247 |
| Bst6I | CTCTTC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 2 cut(s) | 101, 144 |
| BstF5I | GGATG | 4 cut(s) | 6, 69, 223, 322 |
| BstH2I | RGCGCY | 2 cut(s) | 304, 343 |
| BstHHI | GCGC | 3 cut(s) | 88, 303, 342 |
| BstKTI | GATC | 5 cut(s) | 15, 181, 194, 358, 365 |
| BstMBI | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 85, 309 |
| BstNSI | RCATGY | 1 cut(s) | 92 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 387 |
| BstV1I | GCAGC | 1 cut(s) | 144 |
| BstX2I | RGATCY | 1 cut(s) | 355 |
| BstYI | RGATCY | 1 cut(s) | 355 |
| Bsu36I | CCTNAGG | 1 cut(s) | 144 |
| BsuRI | GGCC | 1 cut(s) | 379 |
| BtsCI | GGATG | 4 cut(s) | 6, 69, 223, 322 |
| CfoI | GCGC | 3 cut(s) | 88, 303, 342 |
| Csp6I | GTAC | 1 cut(s) | 239 |
| CviAII | CATG | 3 cut(s) | 53, 89, 274 |
| CviJI | RGCY | 6 cut(s) | 149, 157, 206, 283, 312, 379 |
| CviKI_1 | RGCY | 6 cut(s) | 149, 157, 206, 283, 312, 379 |
| CviQI | GTAC | 1 cut(s) | 239 |
| DdeI | CTNAG | 2 cut(s) | 101, 144 |
| DpnI | GATC | 5 cut(s) | 14, 180, 193, 357, 364 |
| DpnII | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| EaeI | YGGCCR | 1 cut(s) | 377 |
| Eam1104I | CTCTTC | 1 cut(s) | 213 |
| EarI | CTCTTC | 1 cut(s) | 213 |
| Eco130I | CCWWGG | 1 cut(s) | 25 |
| Eco81I | CCTNAGG | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 1 cut(s) | 25 |
| ErhI | CCWWGG | 1 cut(s) | 25 |
| FaeI | CATG | 3 cut(s) | 56, 92, 277 |
| FaiI | YATR | 5 cut(s) | 32, 54, 90, 214, 275 |
| FatI | CATG | 3 cut(s) | 52, 88, 273 |
| Fnu4HI | GCNGC | 1 cut(s) | 158 |
| FokI | GGATG | 3 cut(s) | 56, 230, 309 |
| Fsp4HI | GCNGC | 1 cut(s) | 158 |
| FspBI | CTAG | 1 cut(s) | 203 |
| GlaI | GCGC | 3 cut(s) | 87, 302, 341 |
| GluI | GCNGC | 1 cut(s) | 158 |
| HaeII | RGCGCY | 2 cut(s) | 304, 343 |
| HaeIII | GGCC | 1 cut(s) | 379 |
| HhaI | GCGC | 3 cut(s) | 88, 303, 342 |
| Hin1II | CATG | 3 cut(s) | 56, 92, 277 |
| Hin6I | GCGC | 3 cut(s) | 86, 301, 340 |
| HinP1I | GCGC | 3 cut(s) | 86, 301, 340 |
| HinfI | GANTC | 2 cut(s) | 37, 221 |
| Hpy166II | GTNNAC | 2 cut(s) | 200, 250 |
| Hpy188I | TCNGA | 3 cut(s) | 289, 362, 393 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 16, 73, 326 |
| Hpy8I | GTNNAC | 2 cut(s) | 200, 250 |
| Hpy99I | CGWCG | 1 cut(s) | 393 |
| HpyAV | CCTTC | 2 cut(s) | 271, 376 |
| HpyCH4III | ACNGT | 1 cut(s) | 247 |
| HpyCH4IV | ACGT | 1 cut(s) | 384 |
| HpyCH4V | TGCA | 2 cut(s) | 117, 295 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 85, 309 |
| HpyF3I | CTNAG | 2 cut(s) | 101, 144 |
| HpySE526I | ACGT | 1 cut(s) | 384 |
| Hsp92II | CATG | 3 cut(s) | 56, 92, 277 |
| HspAI | GCGC | 3 cut(s) | 86, 301, 340 |
| Kzo9I | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| LguI | GCTCTTC | 1 cut(s) | 213 |
| LpnPI | CCDG | 7 cut(s) | 23, 86, 180, 294, 318, 339, 393 |
| Lsp1109I | GCAGC | 1 cut(s) | 144 |
| LweI | GCATC | 1 cut(s) | 256 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MaeII | ACGT | 1 cut(s) | 384 |
| MalI | GATC | 5 cut(s) | 14, 180, 193, 357, 364 |
| MboI | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| MboII | GAAGA | 2 cut(s) | 54, 200 |
| MflI | RGATCY | 1 cut(s) | 355 |
| MlsI | TGGCCA | 1 cut(s) | 379 |
| MluCI | AATT | 1 cut(s) | 19 |
| MluNI | TGGCCA | 1 cut(s) | 379 |
| MmeI | TCCRAC | 1 cut(s) | 371 |
| Mox20I | TGGCCA | 1 cut(s) | 379 |
| MscI | TGGCCA | 1 cut(s) | 379 |
| Msp20I | TGGCCA | 1 cut(s) | 379 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 85, 309 |
| NdeII | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| NlaIII | CATG | 3 cut(s) | 56, 92, 277 |
| NspI | RCATGY | 1 cut(s) | 92 |
| PciSI | GCTCTTC | 1 cut(s) | 213 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 187 |
| PfeI | GAWTC | 2 cut(s) | 37, 221 |
| PkrI | GCNGC | 1 cut(s) | 159 |
| PshAI | GACNNNNGTC | 1 cut(s) | 387 |
| PsuI | RGATCY | 1 cut(s) | 355 |
| RsaI | GTAC | 1 cut(s) | 240 |
| RsaNI | GTAC | 1 cut(s) | 239 |
| SapI | GCTCTTC | 1 cut(s) | 213 |
| SatI | GCNGC | 1 cut(s) | 158 |
| Sau3AI | GATC | 5 cut(s) | 12, 178, 191, 355, 362 |
| SetI | ASST | 4 cut(s) | 31, 208, 337, 387 |
| SfaNI | GCATC | 1 cut(s) | 256 |
| Sse9I | AATT | 1 cut(s) | 19 |
| SspI | AATATT | 1 cut(s) | 166 |
| SspMI | CTAG | 1 cut(s) | 203 |
| StyI | CCWWGG | 1 cut(s) | 25 |
| TaaI | ACNGT | 1 cut(s) | 247 |
| TaiI | ACGT | 1 cut(s) | 387 |
| TaqI | TCGA | 1 cut(s) | 40 |
| TasI | AATT | 1 cut(s) | 19 |
| TfiI | GAWTC | 2 cut(s) | 37, 221 |
| TseI | GCWGC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 3 cut(s) | 17, 250, 290 |
| TspGWI | ACGGA | 1 cut(s) | 333 |
| XceI | RCATGY | 1 cut(s) | 92 |
| XspI | CTAG | 1 cut(s) | 203 |