ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 347 |
| AciI | CCGC | 2 cut(s) | 118, 347 |
| AcsI | RAATTY | 1 cut(s) | 444 |
| AfaI | GTAC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 376 |
| AgsI | TTSAA | 2 cut(s) | 77, 625 |
| AjnI | CCWGG | 1 cut(s) | 479 |
| AluBI | AGCT | 8 cut(s) | 17, 61, 247, 317, 541, 553, 576, 640 |
| AluI | AGCT | 8 cut(s) | 17, 61, 247, 317, 541, 553, 576, 640 |
| Alw26I | GTCTC | 1 cut(s) | 481 |
| AoxI | GGCC | 3 cut(s) | 170, 285, 563 |
| ApeKI | GCWGC | 3 cut(s) | 14, 115, 487 |
| ApoI | RAATTY | 1 cut(s) | 444 |
| AseI | ATTAAT | 1 cut(s) | 228 |
| AspLEI | GCGC | 2 cut(s) | 109, 487 |
| AspS9I | GGNCC | 3 cut(s) | 170, 285, 292 |
| AsuHPI | GGTGA | 3 cut(s) | 59, 104, 427 |
| AvaII | GGWCC | 1 cut(s) | 292 |
| BbvCI | CCTCAGC | 1 cut(s) | 318 |
| BbvI | GCAGC | 3 cut(s) | 26, 127, 474 |
| BciT130I | CCWGG | 1 cut(s) | 481 |
| BcoDI | GTCTC | 1 cut(s) | 481 |
| BfaI | CTAG | 3 cut(s) | 342, 357, 449 |
| BfmI | CTRYAG | 1 cut(s) | 149 |
| BfoI | RGCGCY | 1 cut(s) | 488 |
| BglII | AGATCT | 1 cut(s) | 338 |
| BisI | GCNGC | 3 cut(s) | 15, 116, 488 |
| BlsI | GCNGC | 3 cut(s) | 16, 117, 489 |
| Bme1390I | CCNGG | 1 cut(s) | 481 |
| Bme18I | GGWCC | 1 cut(s) | 292 |
| BmgT120I | GGNCC | 3 cut(s) | 170, 285, 292 |
| BmiI | GGNNCC | 2 cut(s) | 286, 368 |
| BmrFI | CCNGG | 1 cut(s) | 481 |
| BmsI | GCATC | 2 cut(s) | 209, 226 |
| BpmI | CTGGAG | 2 cut(s) | 463, 656 |
| Bpu10I | CCTNAGC | 1 cut(s) | 318 |
| BsaJI | CCNNGG | 2 cut(s) | 288, 480 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 146, 176, 413, 443 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 376 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| BseBI | CCWGG | 1 cut(s) | 481 |
| BseDI | CCNNGG | 2 cut(s) | 288, 480 |
| BseGI | GGATG | 3 cut(s) | 241, 283, 519 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BseMII | CTCAG | 2 cut(s) | 234, 309 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BseRI | GAGGAG | 1 cut(s) | 563 |
| BseXI | GCAGC | 3 cut(s) | 26, 127, 474 |
| BshFI | GGCC | 3 cut(s) | 172, 287, 565 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BsmAI | GTCTC | 1 cut(s) | 481 |
| BsmI | GAATGC | 1 cut(s) | 505 |
| BsnI | GGCC | 3 cut(s) | 172, 287, 565 |
| Bsp143I | GATC | 1 cut(s) | 338 |
| BspACI | CCGC | 2 cut(s) | 118, 347 |
| BspANI | GGCC | 3 cut(s) | 172, 287, 565 |
| BspCNI | CTCAG | 2 cut(s) | 235, 310 |
| BspHI | TCATGA | 1 cut(s) | 262 |
| BspLI | GGNNCC | 2 cut(s) | 286, 368 |
| BspMAI | CTGCAG | 1 cut(s) | 153 |
| BsrBI | CCGCTC | 1 cut(s) | 347 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssECI | CCNNGG | 2 cut(s) | 288, 480 |
| BssMI | GATC | 1 cut(s) | 338 |
| Bst2UI | CCWGG | 1 cut(s) | 481 |
| Bst4CI | ACNGT | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 555 |
| BstDEI | CTNAG | 3 cut(s) | 65, 243, 318 |
| BstF5I | GGATG | 3 cut(s) | 241, 283, 519 |
| BstH2I | RGCGCY | 1 cut(s) | 488 |
| BstHHI | GCGC | 2 cut(s) | 109, 487 |
| BstKTI | GATC | 1 cut(s) | 341 |
| BstMAI | GTCTC | 1 cut(s) | 481 |
| BstMBI | GATC | 1 cut(s) | 338 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 106, 115 |
| BstNI | CCWGG | 1 cut(s) | 481 |
| BstNSI | RCATGY | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 479 |
| BstSFI | CTRYAG | 1 cut(s) | 149 |
| BstV1I | GCAGC | 3 cut(s) | 26, 127, 474 |
| BstX2I | RGATCY | 1 cut(s) | 338 |
| BstYI | RGATCY | 1 cut(s) | 338 |
| BsuRI | GGCC | 3 cut(s) | 172, 287, 565 |
| BtsCI | GGATG | 3 cut(s) | 241, 283, 519 |
| Cac8I | GCNNGC | 1 cut(s) | 555 |
| CciI | TCATGA | 1 cut(s) | 262 |
| CfoI | GCGC | 2 cut(s) | 109, 487 |
| Cfr13I | GGNCC | 3 cut(s) | 170, 285, 292 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CviAII | CATG | 4 cut(s) | 26, 101, 263, 272 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DdeI | CTNAG | 3 cut(s) | 65, 243, 318 |
| DpnI | GATC | 1 cut(s) | 340 |
| DpnII | GATC | 1 cut(s) | 338 |
| Eco47I | GGWCC | 1 cut(s) | 292 |
| EcoO109I | RGGNCCY | 2 cut(s) | 170, 285 |
| EcoRII | CCWGG | 1 cut(s) | 479 |
| FaeI | CATG | 4 cut(s) | 29, 104, 266, 275 |
| FaiI | YATR | 7 cut(s) | 27, 102, 198, 264, 273, 297, 496 |
| FatI | CATG | 4 cut(s) | 25, 100, 262, 271 |
| Fnu4HI | GCNGC | 3 cut(s) | 15, 116, 488 |
| FokI | GGATG | 3 cut(s) | 248, 290, 506 |
| Fsp4HI | GCNGC | 3 cut(s) | 15, 116, 488 |
| FspBI | CTAG | 3 cut(s) | 342, 357, 449 |
| GlaI | GCGC | 2 cut(s) | 108, 486 |
| GluI | GCNGC | 3 cut(s) | 15, 116, 488 |
| GsuI | CTGGAG | 2 cut(s) | 463, 656 |
| HaeII | RGCGCY | 1 cut(s) | 488 |
| HaeIII | GGCC | 3 cut(s) | 172, 287, 565 |
| HhaI | GCGC | 2 cut(s) | 109, 487 |
| Hin1II | CATG | 4 cut(s) | 29, 104, 266, 275 |
| Hin6I | GCGC | 2 cut(s) | 107, 485 |
| HinP1I | GCGC | 2 cut(s) | 107, 485 |
| HinfI | GANTC | 1 cut(s) | 647 |
| HphI | GGTGA | 3 cut(s) | 59, 104, 427 |
| Hpy166II | GTNNAC | 1 cut(s) | 180 |
| Hpy188I | TCNGA | 3 cut(s) | 9, 244, 292 |
| Hpy188III | TCNNGA | 8 cut(s) | 125, 205, 233, 263, 342, 385, 449, 635 |
| Hpy8I | GTNNAC | 1 cut(s) | 180 |
| HpyAV | CCTTC | 4 cut(s) | 357, 412, 578, 598 |
| HpyCH4III | ACNGT | 1 cut(s) | 404 |
| HpyCH4IV | ACGT | 1 cut(s) | 411 |
| HpyCH4V | TGCA | 6 cut(s) | 14, 115, 151, 328, 490, 592 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 106, 115 |
| HpyF3I | CTNAG | 3 cut(s) | 65, 243, 318 |
| HpySE526I | ACGT | 1 cut(s) | 411 |
| Hsp92II | CATG | 4 cut(s) | 29, 104, 266, 275 |
| HspAI | GCGC | 2 cut(s) | 107, 485 |
| Kzo9I | GATC | 1 cut(s) | 338 |
| LmnI | GCTCC | 2 cut(s) | 550, 637 |
| Lsp1109I | GCAGC | 3 cut(s) | 26, 127, 474 |
| LweI | GCATC | 2 cut(s) | 209, 226 |
| MaeI | CTAG | 3 cut(s) | 342, 357, 449 |
| MaeII | ACGT | 1 cut(s) | 411 |
| MaeIII | GTNAC | 2 cut(s) | 47, 468 |
| MalI | GATC | 1 cut(s) | 340 |
| MbiI | CCGCTC | 1 cut(s) | 347 |
| MboI | GATC | 1 cut(s) | 338 |
| MboII | GAAGA | 4 cut(s) | 348, 372, 541, 656 |
| MfeI | CAATTG | 1 cut(s) | 510 |
| MflI | RGATCY | 1 cut(s) | 338 |
| MluCI | AATT | 4 cut(s) | 424, 444, 510, 620 |
| MseI | TTAA | 5 cut(s) | 54, 228, 456, 534, 597 |
| MslI | CAYNNNNRTG | 1 cut(s) | 276 |
| MspA1I | CMGCKG | 1 cut(s) | 118 |
| MspR9I | CCNGG | 1 cut(s) | 481 |
| MunI | CAATTG | 1 cut(s) | 510 |
| Mva1269I | GAATGC | 1 cut(s) | 505 |
| MvaI | CCWGG | 1 cut(s) | 481 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 106, 115 |
| NdeII | GATC | 1 cut(s) | 338 |
| NlaIII | CATG | 4 cut(s) | 29, 104, 266, 275 |
| NlaIV | GGNNCC | 2 cut(s) | 286, 368 |
| NmuCI | GTSAC | 2 cut(s) | 47, 468 |
| NspI | RCATGY | 1 cut(s) | 104 |
| PagI | TCATGA | 1 cut(s) | 262 |
| PctI | GAATGC | 1 cut(s) | 505 |
| PfeI | GAWTC | 1 cut(s) | 647 |
| PkrI | GCNGC | 3 cut(s) | 16, 117, 489 |
| PshBI | ATTAAT | 1 cut(s) | 228 |
| Psp6I | CCWGG | 1 cut(s) | 479 |
| PspGI | CCWGG | 1 cut(s) | 479 |
| PspN4I | GGNNCC | 2 cut(s) | 286, 368 |
| PspPI | GGNCC | 3 cut(s) | 170, 285, 292 |
| PstI | CTGCAG | 1 cut(s) | 153 |
| PsuI | RGATCY | 1 cut(s) | 338 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 276 |
| SaqAI | TTAA | 5 cut(s) | 54, 228, 456, 534, 597 |
| SatI | GCNGC | 3 cut(s) | 15, 116, 488 |
| Sau3AI | GATC | 1 cut(s) | 338 |
| Sau96I | GGNCC | 3 cut(s) | 170, 285, 292 |
| ScrFI | CCNGG | 1 cut(s) | 481 |
| SfaNI | GCATC | 2 cut(s) | 209, 226 |
| SfcI | CTRYAG | 1 cut(s) | 149 |
| SinI | GGWCC | 1 cut(s) | 292 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 276 |
| Sse9I | AATT | 4 cut(s) | 424, 444, 510, 620 |
| SsiI | CCGC | 2 cut(s) | 118, 347 |
| SspI | AATATT | 1 cut(s) | 73 |
| SspMI | CTAG | 3 cut(s) | 342, 357, 449 |
| StyD4I | CCNGG | 1 cut(s) | 479 |
| TaaI | ACNGT | 1 cut(s) | 404 |
| TaiI | ACGT | 1 cut(s) | 414 |
| TaqI | TCGA | 2 cut(s) | 204, 375 |
| TasI | AATT | 4 cut(s) | 424, 444, 510, 620 |
| TfiI | GAWTC | 1 cut(s) | 647 |
| Tru1I | TTAA | 5 cut(s) | 54, 228, 456, 534, 597 |
| Tru9I | TTAA | 5 cut(s) | 54, 228, 456, 534, 597 |
| TseFI | GTSAC | 2 cut(s) | 47, 468 |
| TseI | GCWGC | 3 cut(s) | 14, 115, 487 |
| Tsp45I | GTSAC | 2 cut(s) | 47, 468 |
| TspDTI | ATGAA | 4 cut(s) | 214, 251, 260, 597 |
| VpaK11BI | GGWCC | 1 cut(s) | 292 |
| VspI | ATTAAT | 1 cut(s) | 228 |
| XapI | RAATTY | 1 cut(s) | 444 |
| XbaI | TCTAGA | 2 cut(s) | 341, 448 |
| XceI | RCATGY | 1 cut(s) | 104 |
| XspI | CTAG | 3 cut(s) | 342, 357, 449 |