Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 238 |
| AfaI | GTAC | 1 cut(s) | 69 |
| AgsI | TTSAA | 4 cut(s) | 80, 242, 308, 406 |
| AjnI | CCWGG | 1 cut(s) | 426 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 27, 59 |
| AoxI | GGCC | 1 cut(s) | 430 |
| ApeKI | GCWGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 1 cut(s) | 430 |
| AsuHPI | GGTGA | 1 cut(s) | 331 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 28 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BccI | CCATC | 2 cut(s) | 119, 430 |
| BciT130I | CCWGG | 1 cut(s) | 428 |
| BfaI | CTAG | 2 cut(s) | 105, 162 |
| BfmI | CTRYAG | 1 cut(s) | 297 |
| BfuAI | ACCTGC | 1 cut(s) | 238 |
| BisI | GCNGC | 1 cut(s) | 8 |
| BlsI | GCNGC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 1 cut(s) | 428 |
| BmgT120I | GGNCC | 1 cut(s) | 430 |
| BmrFI | CCNGG | 1 cut(s) | 428 |
| BmsI | GCATC | 1 cut(s) | 310 |
| BsaJI | CCNNGG | 1 cut(s) | 427 |
| Bse1I | ACTGG | 1 cut(s) | 329 |
| Bse3DI | GCAATG | 1 cut(s) | 70 |
| BseBI | CCWGG | 1 cut(s) | 428 |
| BseDI | CCNNGG | 1 cut(s) | 427 |
| BseGI | GGATG | 2 cut(s) | 208, 325 |
| BseMI | GCAATG | 1 cut(s) | 70 |
| BseMII | CTCAG | 2 cut(s) | 281, 282 |
| BseNI | ACTGG | 1 cut(s) | 329 |
| BseRI | GAGGAG | 1 cut(s) | 398 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 432 |
| BsnI | GGCC | 1 cut(s) | 432 |
| BspANI | GGCC | 1 cut(s) | 432 |
| BspCNI | CTCAG | 2 cut(s) | 280, 283 |
| BspHI | TCATGA | 2 cut(s) | 19, 252 |
| BspMI | ACCTGC | 1 cut(s) | 238 |
| BsrDI | GCAATG | 1 cut(s) | 70 |
| BsrI | ACTGG | 1 cut(s) | 329 |
| BssECI | CCNNGG | 1 cut(s) | 427 |
| Bst2UI | CCWGG | 1 cut(s) | 428 |
| BstDEI | CTNAG | 2 cut(s) | 267, 291 |
| BstF5I | GGATG | 2 cut(s) | 208, 325 |
| BstNI | CCWGG | 1 cut(s) | 428 |
| BstSCI | CCNGG | 1 cut(s) | 426 |
| BstSFI | CTRYAG | 1 cut(s) | 297 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BsuRI | GGCC | 1 cut(s) | 432 |
| BtsCI | GGATG | 2 cut(s) | 208, 325 |
| BtsIMutI | CAGTG | 1 cut(s) | 222 |
| BveI | ACCTGC | 1 cut(s) | 238 |
| CciI | TCATGA | 2 cut(s) | 19, 252 |
| Cfr13I | GGNCC | 1 cut(s) | 430 |
| Csp6I | GTAC | 1 cut(s) | 68 |
| CviAII | CATG | 3 cut(s) | 20, 253, 441 |
| CviJI | RGCY | 7 cut(s) | 10, 118, 161, 288, 295, 302, 432 |
| CviKI_1 | RGCY | 7 cut(s) | 10, 118, 161, 288, 295, 302, 432 |
| CviQI | GTAC | 1 cut(s) | 68 |
| DdeI | CTNAG | 2 cut(s) | 267, 291 |
| EcoRII | CCWGG | 1 cut(s) | 426 |
| FaeI | CATG | 3 cut(s) | 23, 256, 444 |
| FaiI | YATR | 8 cut(s) | 21, 30, 254, 299, 317, 348, 350, 442 |
| FatI | CATG | 3 cut(s) | 19, 252, 440 |
| FauNDI | CATATG | 1 cut(s) | 348 |
| Fnu4HI | GCNGC | 1 cut(s) | 8 |
| FokI | GGATG | 2 cut(s) | 215, 332 |
| Fsp4HI | GCNGC | 1 cut(s) | 8 |
| FspBI | CTAG | 2 cut(s) | 105, 162 |
| GluI | GCNGC | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 432 |
| Hin1II | CATG | 3 cut(s) | 23, 256, 444 |
| HinfI | GANTC | 2 cut(s) | 42, 336 |
| HphI | GGTGA | 1 cut(s) | 331 |
| Hpy188I | TCNGA | 4 cut(s) | 99, 171, 292, 335 |
| Hpy188III | TCNNGA | 4 cut(s) | 20, 80, 253, 308 |
| HpyAV | CCTTC | 4 cut(s) | 257, 278, 314, 425 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 411 |
| HpyF3I | CTNAG | 2 cut(s) | 267, 291 |
| Hsp92II | CATG | 3 cut(s) | 23, 256, 444 |
| LpnPI | CCDG | 7 cut(s) | 100, 176, 243, 254, 342, 413, 440 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| LweI | GCATC | 1 cut(s) | 310 |
| MaeI | CTAG | 2 cut(s) | 105, 162 |
| MaeIII | GTNAC | 2 cut(s) | 176, 337 |
| MlyI | GAGTC | 2 cut(s) | 51, 345 |
| MnlI | CCTC | 5 cut(s) | 25, 56, 93, 193, 376 |
| MseI | TTAA | 1 cut(s) | 120 |
| MslI | CAYNNNNRTG | 1 cut(s) | 351 |
| MspR9I | CCNGG | 1 cut(s) | 428 |
| MvaI | CCWGG | 1 cut(s) | 428 |
| NdeI | CATATG | 1 cut(s) | 348 |
| NlaIII | CATG | 3 cut(s) | 23, 256, 444 |
| NmuCI | GTSAC | 2 cut(s) | 176, 337 |
| PagI | TCATGA | 2 cut(s) | 19, 252 |
| PkrI | GCNGC | 1 cut(s) | 9 |
| PleI | GAGTC | 2 cut(s) | 50, 344 |
| PpsI | GAGTC | 2 cut(s) | 50, 344 |
| Psp6I | CCWGG | 1 cut(s) | 426 |
| PspGI | CCWGG | 1 cut(s) | 426 |
| PspPI | GGNCC | 1 cut(s) | 430 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 60, 92 |
| RsaI | GTAC | 1 cut(s) | 69 |
| RsaNI | GTAC | 1 cut(s) | 68 |
| RseI | CAYNNNNRTG | 1 cut(s) | 351 |
| SaqAI | TTAA | 1 cut(s) | 120 |
| SatI | GCNGC | 1 cut(s) | 8 |
| Sau96I | GGNCC | 1 cut(s) | 430 |
| SchI | GAGTC | 2 cut(s) | 51, 345 |
| ScrFI | CCNGG | 1 cut(s) | 428 |
| SetI | ASST | 4 cut(s) | 104, 214, 232, 273 |
| SfaNI | GCATC | 1 cut(s) | 310 |
| SfcI | CTRYAG | 1 cut(s) | 297 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 351 |
| SspI | AATATT | 1 cut(s) | 89 |
| SspMI | CTAG | 2 cut(s) | 105, 162 |
| StyD4I | CCNGG | 1 cut(s) | 426 |
| TatI | WGTACW | 1 cut(s) | 67 |
| Tru1I | TTAA | 1 cut(s) | 120 |
| Tru9I | TTAA | 1 cut(s) | 120 |
| TscAI | CASTG | 1 cut(s) | 229 |
| TseFI | GTSAC | 2 cut(s) | 176, 337 |
| TseI | GCWGC | 1 cut(s) | 7 |
| Tsp45I | GTSAC | 2 cut(s) | 176, 337 |
| TspDTI | ATGAA | 5 cut(s) | 17, 36, 269, 365, 372 |
| TspRI | CASTG | 1 cut(s) | 229 |
| XspI | CTAG | 2 cut(s) | 105, 162 |