26S proteasome non-ATPase regulatory subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PAR1 | PF06521 | 28 - 172 | 1.8e-70 | PAR1 protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 115 |
| AciI | CCGC | 3 cut(s) | 122, 196, 277 |
| AclI | AACGTT | 1 cut(s) | 369 |
| AclWI | GGATC | 1 cut(s) | 463 |
| AcsI | RAATTY | 1 cut(s) | 547 |
| AfaI | GTAC | 1 cut(s) | 492 |
| AflIII | ACRYGT | 1 cut(s) | 86 |
| AgsI | TTSAA | 5 cut(s) | 9, 22, 212, 229, 388 |
| AjnI | CCWGG | 1 cut(s) | 493 |
| AluBI | AGCT | 6 cut(s) | 41, 250, 334, 398, 477, 557 |
| AluI | AGCT | 6 cut(s) | 41, 250, 334, 398, 477, 557 |
| AlwI | GGATC | 1 cut(s) | 463 |
| Ama87I | CYCGRG | 1 cut(s) | 72 |
| AoxI | GGCC | 1 cut(s) | 268 |
| ApeKI | GCWGC | 1 cut(s) | 395 |
| ApoI | RAATTY | 1 cut(s) | 547 |
| AspLEI | GCGC | 2 cut(s) | 116, 436 |
| AspS9I | GGNCC | 4 cut(s) | 100, 440, 497, 530 |
| AsuHPI | GGTGA | 1 cut(s) | 413 |
| AvaI | CYCGRG | 1 cut(s) | 72 |
| AvaII | GGWCC | 4 cut(s) | 100, 440, 497, 530 |
| BbvI | GCAGC | 1 cut(s) | 407 |
| BceAI | ACGGC | 1 cut(s) | 38 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 53, 87 |
| BciT130I | CCWGG | 1 cut(s) | 495 |
| BfaI | CTAG | 2 cut(s) | 38, 311 |
| BisI | GCNGC | 2 cut(s) | 196, 396 |
| BlsI | GCNGC | 2 cut(s) | 197, 397 |
| Bme1390I | CCNGG | 1 cut(s) | 495 |
| Bme18I | GGWCC | 4 cut(s) | 100, 440, 497, 530 |
| BmeT110I | CYCGRG | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 4 cut(s) | 100, 440, 497, 530 |
| BmiI | GGNNCC | 1 cut(s) | 442 |
| BmrFI | CCNGG | 1 cut(s) | 495 |
| BmsI | GCATC | 2 cut(s) | 101, 264 |
| BpuEI | CTTGAG | 1 cut(s) | 173 |
| Bse1I | ACTGG | 2 cut(s) | 500, 533 |
| BseBI | CCWGG | 1 cut(s) | 495 |
| BseGI | GGATG | 1 cut(s) | 296 |
| BseMII | CTCAG | 3 cut(s) | 231, 359, 456 |
| BseNI | ACTGG | 2 cut(s) | 500, 533 |
| BseRI | GAGGAG | 5 cut(s) | 90, 93, 181, 184, 333 |
| BseXI | GCAGC | 1 cut(s) | 407 |
| BseYI | CCCAGC | 1 cut(s) | 508 |
| BshFI | GGCC | 1 cut(s) | 270 |
| BsiHKCI | CYCGRG | 1 cut(s) | 72 |
| BsnI | GGCC | 1 cut(s) | 270 |
| BsoBI | CYCGRG | 1 cut(s) | 72 |
| Bsp143I | GATC | 1 cut(s) | 468 |
| BspACI | CCGC | 3 cut(s) | 122, 196, 277 |
| BspANI | GGCC | 1 cut(s) | 270 |
| BspCNI | CTCAG | 3 cut(s) | 232, 358, 457 |
| BspLI | GGNNCC | 1 cut(s) | 442 |
| BspPI | GGATC | 1 cut(s) | 463 |
| BsrI | ACTGG | 2 cut(s) | 500, 533 |
| BssMI | GATC | 1 cut(s) | 468 |
| Bst2UI | CCWGG | 1 cut(s) | 495 |
| Bst4CI | ACNGT | 1 cut(s) | 359 |
| BstC8I | GCNNGC | 2 cut(s) | 62, 248 |
| BstDEI | CTNAG | 3 cut(s) | 240, 345, 465 |
| BstF5I | GGATG | 1 cut(s) | 296 |
| BstHHI | GCGC | 2 cut(s) | 116, 436 |
| BstKTI | GATC | 1 cut(s) | 471 |
| BstMBI | GATC | 1 cut(s) | 468 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 38, 66, 252, 276 |
| BstNI | CCWGG | 1 cut(s) | 495 |
| BstNSI | RCATGY | 3 cut(s) | 90, 164, 195 |
| BstSCI | CCNGG | 1 cut(s) | 493 |
| BstV1I | GCAGC | 1 cut(s) | 407 |
| BstX2I | RGATCY | 1 cut(s) | 468 |
| BstYI | RGATCY | 1 cut(s) | 468 |
| BsuRI | GGCC | 1 cut(s) | 270 |
| BtsCI | GGATG | 1 cut(s) | 296 |
| BtsIMutI | CAGTG | 1 cut(s) | 353 |
| Cac8I | GCNNGC | 2 cut(s) | 62, 248 |
| CfoI | GCGC | 2 cut(s) | 116, 436 |
| Cfr13I | GGNCC | 4 cut(s) | 100, 440, 497, 530 |
| Csp6I | GTAC | 1 cut(s) | 491 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 247, 282 |
| CviAII | CATG | 4 cut(s) | 87, 161, 192, 544 |
| CviQI | GTAC | 1 cut(s) | 491 |
| DdeI | CTNAG | 3 cut(s) | 240, 345, 465 |
| DpnI | GATC | 1 cut(s) | 470 |
| DpnII | GATC | 1 cut(s) | 468 |
| Eco47I | GGWCC | 4 cut(s) | 100, 440, 497, 530 |
| Eco88I | CYCGRG | 1 cut(s) | 72 |
| EcoO109I | RGGNCCY | 1 cut(s) | 440 |
| EcoRII | CCWGG | 1 cut(s) | 493 |
| FaeI | CATG | 4 cut(s) | 90, 164, 195, 547 |
| FatI | CATG | 4 cut(s) | 86, 160, 191, 543 |
| Fnu4HI | GCNGC | 2 cut(s) | 196, 396 |
| FokI | GGATG | 1 cut(s) | 283 |
| Fsp4HI | GCNGC | 2 cut(s) | 196, 396 |
| FspAI | RTGCGCAY | 1 cut(s) | 115 |
| FspBI | CTAG | 2 cut(s) | 38, 311 |
| FspI | TGCGCA | 1 cut(s) | 115 |
| GlaI | GCGC | 2 cut(s) | 115, 435 |
| GluI | GCNGC | 2 cut(s) | 196, 396 |
| GsaI | CCCAGC | 1 cut(s) | 512 |
| HaeIII | GGCC | 1 cut(s) | 270 |
| HhaI | GCGC | 2 cut(s) | 116, 436 |
| Hin1II | CATG | 4 cut(s) | 90, 164, 195, 547 |
| Hin6I | GCGC | 2 cut(s) | 114, 434 |
| HinP1I | GCGC | 2 cut(s) | 114, 434 |
| HincII | GTYRAC | 1 cut(s) | 376 |
| HindII | GTYRAC | 1 cut(s) | 376 |
| HindIII | AAGCTT | 1 cut(s) | 332 |
| HinfI | GANTC | 3 cut(s) | 291, 302, 314 |
| HphI | GGTGA | 1 cut(s) | 413 |
| Hpy166II | GTNNAC | 3 cut(s) | 376, 505, 538 |
| Hpy188I | TCNGA | 3 cut(s) | 205, 301, 466 |
| Hpy188III | TCNNGA | 2 cut(s) | 98, 152 |
| Hpy8I | GTNNAC | 3 cut(s) | 376, 505, 538 |
| HpyAV | CCTTC | 2 cut(s) | 398, 521 |
| HpyCH4III | ACNGT | 1 cut(s) | 359 |
| HpyCH4IV | ACGT | 1 cut(s) | 369 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 64, 255 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 38, 66, 252, 276 |
| HpyF3I | CTNAG | 3 cut(s) | 240, 345, 465 |
| HpySE526I | ACGT | 1 cut(s) | 369 |
| Hsp92II | CATG | 4 cut(s) | 90, 164, 195, 547 |
| HspAI | GCGC | 2 cut(s) | 114, 434 |
| Kzo9I | GATC | 1 cut(s) | 468 |
| Lsp1109I | GCAGC | 1 cut(s) | 407 |
| LweI | GCATC | 2 cut(s) | 101, 264 |
| MaeI | CTAG | 2 cut(s) | 38, 311 |
| MaeII | ACGT | 1 cut(s) | 369 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 470 |
| MboI | GATC | 1 cut(s) | 468 |
| MflI | RGATCY | 1 cut(s) | 468 |
| MluCI | AATT | 2 cut(s) | 207, 547 |
| MlyI | GAGTC | 1 cut(s) | 323 |
| MnlI | CCTC | 6 cut(s) | 68, 71, 159, 162, 167, 354 |
| MslI | CAYNNNNRTG | 1 cut(s) | 190 |
| MspA1I | CMGCKG | 1 cut(s) | 398 |
| MspR9I | CCNGG | 1 cut(s) | 495 |
| MvaI | CCWGG | 1 cut(s) | 495 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 38, 66, 252, 276 |
| NdeII | GATC | 1 cut(s) | 468 |
| NlaIII | CATG | 4 cut(s) | 90, 164, 195, 547 |
| NlaIV | GGNNCC | 1 cut(s) | 442 |
| NsbI | TGCGCA | 1 cut(s) | 115 |
| NspI | RCATGY | 3 cut(s) | 90, 164, 195 |
| PaeR7I | CTCGAG | 1 cut(s) | 72 |
| PciI | ACATGT | 1 cut(s) | 86 |
| PfeI | GAWTC | 2 cut(s) | 291, 302 |
| PkrI | GCNGC | 2 cut(s) | 197, 397 |
| PleI | GAGTC | 1 cut(s) | 322 |
| PpsI | GAGTC | 1 cut(s) | 322 |
| PpuMI | RGGWCCY | 1 cut(s) | 440 |
| PscI | ACATGT | 1 cut(s) | 86 |
| Psp1406I | AACGTT | 1 cut(s) | 369 |
| Psp5II | RGGWCCY | 1 cut(s) | 440 |
| Psp6I | CCWGG | 1 cut(s) | 493 |
| PspFI | CCCAGC | 1 cut(s) | 508 |
| PspGI | CCWGG | 1 cut(s) | 493 |
| PspN4I | GGNNCC | 1 cut(s) | 442 |
| PspPI | GGNCC | 4 cut(s) | 100, 440, 497, 530 |
| PspPPI | RGGWCCY | 1 cut(s) | 440 |
| PspXI | VCTCGAGB | 1 cut(s) | 72 |
| PsuI | RGATCY | 1 cut(s) | 468 |
| PvuII | CAGCTG | 1 cut(s) | 398 |
| RsaI | GTAC | 1 cut(s) | 492 |
| RsaNI | GTAC | 1 cut(s) | 491 |
| RseI | CAYNNNNRTG | 1 cut(s) | 190 |
| SatI | GCNGC | 2 cut(s) | 196, 396 |
| Sau3AI | GATC | 1 cut(s) | 468 |
| Sau96I | GGNCC | 4 cut(s) | 100, 440, 497, 530 |
| SchI | GAGTC | 1 cut(s) | 323 |
| ScrFI | CCNGG | 1 cut(s) | 495 |
| SfaNI | GCATC | 2 cut(s) | 101, 264 |
| Sfr274I | CTCGAG | 1 cut(s) | 72 |
| SinI | GGWCC | 4 cut(s) | 100, 440, 497, 530 |
| SlaI | CTCGAG | 1 cut(s) | 72 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 190 |
| SmlI | CTYRAG | 2 cut(s) | 72, 152 |
| SmoI | CTYRAG | 2 cut(s) | 72, 152 |
| Sse9I | AATT | 2 cut(s) | 207, 547 |
| SsiI | CCGC | 3 cut(s) | 122, 196, 277 |
| SspMI | CTAG | 2 cut(s) | 38, 311 |
| StyD4I | CCNGG | 1 cut(s) | 493 |
| TaaI | ACNGT | 1 cut(s) | 359 |
| TaiI | ACGT | 1 cut(s) | 372 |
| TaqI | TCGA | 1 cut(s) | 73 |
| TasI | AATT | 2 cut(s) | 207, 547 |
| TauI | GCSGC | 1 cut(s) | 198 |
| TfiI | GAWTC | 2 cut(s) | 291, 302 |
| TscAI | CASTG | 1 cut(s) | 353 |
| TseI | GCWGC | 1 cut(s) | 395 |
| TspDTI | ATGAA | 2 cut(s) | 117, 560 |
| TspGWI | ACGGA | 2 cut(s) | 303, 461 |
| TspRI | CASTG | 1 cut(s) | 353 |
| VpaK11BI | GGWCC | 4 cut(s) | 100, 440, 497, 530 |
| XapI | RAATTY | 1 cut(s) | 547 |
| XceI | RCATGY | 3 cut(s) | 90, 164, 195 |
| XhoI | CTCGAG | 1 cut(s) | 72 |
| XspI | CTAG | 2 cut(s) | 38, 311 |