Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 157 |
| Alw26I | GTCTC | 1 cut(s) | 96 |
| Ama87I | CYCGRG | 1 cut(s) | 95 |
| AoxI | GGCC | 1 cut(s) | 20 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 58 |
| AsuC2I | CCSGG | 2 cut(s) | 96, 97 |
| AvaI | CYCGRG | 1 cut(s) | 95 |
| AxyI | CCTNAGG | 1 cut(s) | 179 |
| BbsI | GAAGAC | 1 cut(s) | 40 |
| BccI | CCATC | 1 cut(s) | 77 |
| BcnI | CCSGG | 2 cut(s) | 96, 97 |
| BcoDI | GTCTC | 1 cut(s) | 96 |
| Bme1390I | CCNGG | 2 cut(s) | 96, 97 |
| BmeT110I | CYCGRG | 1 cut(s) | 95 |
| BmrFI | CCNGG | 2 cut(s) | 96, 97 |
| BmrI | ACTGGG | 1 cut(s) | 124 |
| BmuI | ACTGGG | 1 cut(s) | 124 |
| BpiI | GAAGAC | 1 cut(s) | 40 |
| BpuMI | CCSGG | 2 cut(s) | 96, 97 |
| BsaJI | CCNNGG | 2 cut(s) | 13, 95 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 157 |
| Bse1I | ACTGG | 1 cut(s) | 119 |
| Bse21I | CCTNAGG | 1 cut(s) | 179 |
| BseDI | CCNNGG | 2 cut(s) | 13, 95 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 157 |
| BseNI | ACTGG | 1 cut(s) | 119 |
| BsgI | GTGCAG | 1 cut(s) | 63 |
| BshFI | GGCC | 1 cut(s) | 22 |
| BsiHKCI | CYCGRG | 1 cut(s) | 95 |
| BsiSI | CCGG | 1 cut(s) | 96 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 157 |
| BsmAI | GTCTC | 1 cut(s) | 96 |
| BsmI | GAATGC | 2 cut(s) | 58, 60 |
| BsnI | GGCC | 1 cut(s) | 22 |
| BsoBI | CYCGRG | 1 cut(s) | 95 |
| BspANI | GGCC | 1 cut(s) | 22 |
| BsrI | ACTGG | 1 cut(s) | 119 |
| BssECI | CCNNGG | 2 cut(s) | 13, 95 |
| BssT1I | CCWWGG | 1 cut(s) | 13 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstMAI | GTCTC | 1 cut(s) | 96 |
| BstSCI | CCNGG | 2 cut(s) | 94, 95 |
| BstV2I | GAAGAC | 1 cut(s) | 40 |
| Bsu36I | CCTNAGG | 1 cut(s) | 179 |
| BsuRI | GGCC | 1 cut(s) | 22 |
| BtsIMutI | CAGTG | 1 cut(s) | 112 |
| Cfr9I | CCCGGG | 1 cut(s) | 95 |
| CviJI | RGCY | 1 cut(s) | 22 |
| CviKI_1 | RGCY | 1 cut(s) | 22 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| Eco130I | CCWWGG | 1 cut(s) | 13 |
| Eco147I | AGGCCT | 1 cut(s) | 22 |
| Eco81I | CCTNAGG | 1 cut(s) | 179 |
| Eco88I | CYCGRG | 1 cut(s) | 95 |
| EcoT14I | CCWWGG | 1 cut(s) | 13 |
| EcoT22I | ATGCAT | 1 cut(s) | 60 |
| ErhI | CCWWGG | 1 cut(s) | 13 |
| FaiI | YATR | 3 cut(s) | 89, 158, 193 |
| HaeIII | GGCC | 1 cut(s) | 22 |
| HapII | CCGG | 1 cut(s) | 96 |
| HincII | GTYRAC | 1 cut(s) | 189 |
| HindII | GTYRAC | 1 cut(s) | 189 |
| HinfI | GANTC | 1 cut(s) | 147 |
| HpaII | CCGG | 1 cut(s) | 96 |
| Hpy166II | GTNNAC | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 1 cut(s) | 53 |
| Hpy188III | TCNNGA | 1 cut(s) | 131 |
| Hpy8I | GTNNAC | 1 cut(s) | 189 |
| HpyCH4V | TGCA | 2 cut(s) | 44, 58 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| LpnPI | CCDG | 4 cut(s) | 87, 100, 109, 153 |
| MboII | GAAGA | 1 cut(s) | 40 |
| MnlI | CCTC | 1 cut(s) | 12 |
| Mph1103I | ATGCAT | 1 cut(s) | 60 |
| MroXI | GAANNNNTTC | 1 cut(s) | 58 |
| MspI | CCGG | 1 cut(s) | 96 |
| MspR9I | CCNGG | 2 cut(s) | 96, 97 |
| Mva1269I | GAATGC | 2 cut(s) | 58, 60 |
| NciI | CCSGG | 2 cut(s) | 96, 97 |
| NsiI | ATGCAT | 1 cut(s) | 60 |
| PceI | AGGCCT | 1 cut(s) | 22 |
| PctI | GAATGC | 2 cut(s) | 58, 60 |
| PdmI | GAANNNNTTC | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 147 |
| ScrFI | CCNGG | 2 cut(s) | 96, 97 |
| SetI | ASST | 3 cut(s) | 15, 76, 130 |
| SmaI | CCCGGG | 1 cut(s) | 97 |
| SseBI | AGGCCT | 1 cut(s) | 22 |
| StuI | AGGCCT | 1 cut(s) | 22 |
| StyD4I | CCNGG | 2 cut(s) | 94, 95 |
| StyI | CCWWGG | 1 cut(s) | 13 |
| TfiI | GAWTC | 1 cut(s) | 147 |
| TscAI | CASTG | 1 cut(s) | 119 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 44, 140 |
| TspMI | CCCGGG | 1 cut(s) | 95 |
| TspRI | CASTG | 1 cut(s) | 119 |
| XmaI | CCCGGG | 1 cut(s) | 95 |
| XmnI | GAANNNNTTC | 1 cut(s) | 58 |
| Zsp2I | ATGCAT | 1 cut(s) | 60 |