Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 906 |
| AciI | CCGC | 2 cut(s) | 123, 750 |
| AclWI | GGATC | 1 cut(s) | 781 |
| AcoI | YGGCCR | 2 cut(s) | 473, 987 |
| AcsI | RAATTY | 2 cut(s) | 368, 1018 |
| AfaI | GTAC | 2 cut(s) | 416, 639 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 92, 606, 943 |
| AgeI | ACCGGT | 1 cut(s) | 936 |
| AgsI | TTSAA | 4 cut(s) | 303, 564, 736, 877 |
| AhlI | ACTAGT | 1 cut(s) | 43 |
| AjiI | CACGTC | 1 cut(s) | 1011 |
| AjnI | CCWGG | 4 cut(s) | 344, 475, 496, 989 |
| AluBI | AGCT | 3 cut(s) | 228, 963, 1041 |
| AluI | AGCT | 3 cut(s) | 228, 963, 1041 |
| Alw26I | GTCTC | 2 cut(s) | 506, 915 |
| AlwI | GGATC | 1 cut(s) | 781 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 799 |
| AoxI | GGCC | 5 cut(s) | 342, 473, 597, 857, 987 |
| ApoI | RAATTY | 2 cut(s) | 368, 1018 |
| AseI | ATTAAT | 1 cut(s) | 997 |
| AsiGI | ACCGGT | 1 cut(s) | 936 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 757 |
| AspA2I | CCTAGG | 1 cut(s) | 604 |
| AspS9I | GGNCC | 1 cut(s) | 598 |
| AsuC2I | CCSGG | 1 cut(s) | 832 |
| AsuHPI | GGTGA | 1 cut(s) | 786 |
| AvrII | CCTAGG | 1 cut(s) | 604 |
| BalI | TGGCCA | 1 cut(s) | 989 |
| BanII | GRGCYC | 2 cut(s) | 612, 933 |
| BccI | CCATC | 1 cut(s) | 740 |
| BceAI | ACGGC | 1 cut(s) | 488 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 572, 606 |
| BciT130I | CCWGG | 4 cut(s) | 346, 477, 498, 991 |
| BclI | TGATCA | 1 cut(s) | 801 |
| BcnI | CCSGG | 1 cut(s) | 832 |
| BcoDI | GTCTC | 2 cut(s) | 506, 915 |
| BcuI | ACTAGT | 1 cut(s) | 43 |
| BfaI | CTAG | 5 cut(s) | 44, 92, 517, 605, 721 |
| BfmI | CTRYAG | 1 cut(s) | 165 |
| BglII | AGATCT | 1 cut(s) | 2 |
| BisI | GCNGC | 1 cut(s) | 123 |
| BlnI | CCTAGG | 1 cut(s) | 604 |
| BlsI | GCNGC | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 5 cut(s) | 346, 477, 498, 832, 991 |
| BmgBI | CACGTC | 1 cut(s) | 1011 |
| BmgT120I | GGNCC | 1 cut(s) | 598 |
| BmiI | GGNNCC | 1 cut(s) | 760 |
| BmrFI | CCNGG | 5 cut(s) | 346, 477, 498, 832, 991 |
| BmrI | ACTGGG | 1 cut(s) | 936 |
| BmsI | GCATC | 1 cut(s) | 957 |
| BmuI | ACTGGG | 1 cut(s) | 936 |
| BpuEI | CTTGAG | 1 cut(s) | 596 |
| BpuMI | CCSGG | 1 cut(s) | 832 |
| Bsa29I | ATCGAT | 1 cut(s) | 662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 488, 800 |
| BsaI | GGTCTC | 1 cut(s) | 506 |
| BsaJI | CCNNGG | 3 cut(s) | 294, 541, 604 |
| BsaWI | WCCGGW | 1 cut(s) | 936 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 471, 501 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 92, 606, 943 |
| Bse118I | RCCGGY | 1 cut(s) | 936 |
| Bse1I | ACTGG | 5 cut(s) | 28, 86, 459, 931, 990 |
| Bse3DI | GCAATG | 1 cut(s) | 954 |
| Bse8I | GATNNNNATC | 2 cut(s) | 488, 800 |
| BseBI | CCWGG | 4 cut(s) | 346, 477, 498, 991 |
| BseCI | ATCGAT | 1 cut(s) | 662 |
| BseDI | CCNNGG | 3 cut(s) | 294, 541, 604 |
| BseJI | GATNNNNATC | 2 cut(s) | 488, 800 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 92, 606, 943 |
| BseMI | GCAATG | 1 cut(s) | 954 |
| BseMII | CTCAG | 3 cut(s) | 323, 806, 911 |
| BseNI | ACTGG | 5 cut(s) | 28, 86, 459, 931, 990 |
| BseRI | GAGGAG | 1 cut(s) | 696 |
| BseYI | CCCAGC | 2 cut(s) | 191, 553 |
| BsgI | GTGCAG | 2 cut(s) | 235, 598 |
| Bsh1285I | CGRYCG | 1 cut(s) | 108 |
| BshFI | GGCC | 5 cut(s) | 344, 475, 599, 859, 989 |
| BshTI | ACCGGT | 1 cut(s) | 936 |
| BshVI | ATCGAT | 1 cut(s) | 662 |
| BsiEI | CGRYCG | 1 cut(s) | 108 |
| BsiSI | CCGG | 2 cut(s) | 832, 937 |
| BslFI | GGGAC | 1 cut(s) | 794 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 92, 606, 943 |
| BsmAI | GTCTC | 2 cut(s) | 506, 915 |
| BsmFI | GGGAC | 1 cut(s) | 794 |
| BsnI | GGCC | 5 cut(s) | 344, 475, 599, 859, 989 |
| Bso31I | GGTCTC | 1 cut(s) | 506 |
| Bsp1286I | GDGCHC | 2 cut(s) | 612, 933 |
| Bsp143I | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| Bsp19I | CCATGG | 1 cut(s) | 541 |
| BspACI | CCGC | 2 cut(s) | 123, 750 |
| BspANI | GGCC | 5 cut(s) | 344, 475, 599, 859, 989 |
| BspCNI | CTCAG | 3 cut(s) | 324, 805, 910 |
| BspDI | ATCGAT | 1 cut(s) | 662 |
| BspLI | GGNNCC | 1 cut(s) | 760 |
| BspPI | GGATC | 1 cut(s) | 781 |
| BspTNI | GGTCTC | 1 cut(s) | 506 |
| BsrDI | GCAATG | 1 cut(s) | 954 |
| BsrFI | RCCGGY | 1 cut(s) | 936 |
| BsrI | ACTGG | 5 cut(s) | 28, 86, 459, 931, 990 |
| BssAI | RCCGGY | 1 cut(s) | 936 |
| BssECI | CCNNGG | 3 cut(s) | 294, 541, 604 |
| BssMI | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| BssT1I | CCWWGG | 3 cut(s) | 294, 541, 604 |
| Bst2UI | CCWGG | 4 cut(s) | 346, 477, 498, 991 |
| Bst4CI | ACNGT | 3 cut(s) | 166, 629, 741 |
| Bst6I | CTCTTC | 1 cut(s) | 872 |
| BstC8I | GCNNGC | 6 cut(s) | 197, 218, 222, 226, 261, 581 |
| BstDEI | CTNAG | 4 cut(s) | 332, 792, 897, 971 |
| BstDSI | CCRYGG | 1 cut(s) | 541 |
| BstKTI | GATC | 8 cut(s) | 5, 108, 152, 486, 666, 789, 804, 977 |
| BstMAI | GTCTC | 2 cut(s) | 506, 915 |
| BstMBI | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| BstMCI | CGRYCG | 1 cut(s) | 108 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstNI | CCWGG | 4 cut(s) | 346, 477, 498, 991 |
| BstSCI | CCNGG | 5 cut(s) | 344, 475, 496, 830, 989 |
| BstSFI | CTRYAG | 1 cut(s) | 165 |
| BstX2I | RGATCY | 1 cut(s) | 2 |
| BstYI | RGATCY | 1 cut(s) | 2 |
| Bsu15I | ATCGAT | 1 cut(s) | 662 |
| BsuRI | GGCC | 5 cut(s) | 344, 475, 599, 859, 989 |
| BsuTUI | ATCGAT | 1 cut(s) | 662 |
| BtgI | CCRYGG | 1 cut(s) | 541 |
| BtrI | CACGTC | 1 cut(s) | 1011 |
| BtsIMutI | CAGTG | 3 cut(s) | 35, 93, 924 |
| Cac8I | GCNNGC | 6 cut(s) | 197, 218, 222, 226, 261, 581 |
| CaiI | CAGNNNCTG | 1 cut(s) | 799 |
| Cfr10I | RCCGGY | 1 cut(s) | 936 |
| Cfr13I | GGNCC | 1 cut(s) | 598 |
| ClaI | ATCGAT | 1 cut(s) | 662 |
| CseI | GACGC | 3 cut(s) | 706, 854, 917 |
| CsiI | ACCWGGT | 1 cut(s) | 496 |
| Csp6I | GTAC | 2 cut(s) | 415, 638 |
| CspAI | ACCGGT | 1 cut(s) | 936 |
| CviAII | CATG | 4 cut(s) | 373, 542, 692, 889 |
| CviQI | GTAC | 2 cut(s) | 415, 638 |
| DdeI | CTNAG | 4 cut(s) | 332, 792, 897, 971 |
| DpnI | GATC | 8 cut(s) | 4, 107, 151, 485, 665, 788, 803, 976 |
| DpnII | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| EaeI | YGGCCR | 2 cut(s) | 473, 987 |
| Eam1104I | CTCTTC | 1 cut(s) | 872 |
| EarI | CTCTTC | 1 cut(s) | 872 |
| EciI | GGCGGA | 1 cut(s) | 765 |
| Eco130I | CCWWGG | 3 cut(s) | 294, 541, 604 |
| Eco147I | AGGCCT | 1 cut(s) | 344 |
| Eco24I | GRGCYC | 2 cut(s) | 612, 933 |
| Eco31I | GGTCTC | 1 cut(s) | 506 |
| EcoO109I | RGGNCCY | 1 cut(s) | 598 |
| EcoRII | CCWGG | 4 cut(s) | 344, 475, 496, 989 |
| EcoT14I | CCWWGG | 3 cut(s) | 294, 541, 604 |
| EcoT38I | GRGCYC | 2 cut(s) | 612, 933 |
| ErhI | CCWWGG | 3 cut(s) | 294, 541, 604 |
| FaeI | CATG | 4 cut(s) | 376, 545, 695, 892 |
| FaqI | GGGAC | 1 cut(s) | 794 |
| FatI | CATG | 4 cut(s) | 372, 541, 691, 888 |
| FauNDI | CATATG | 1 cut(s) | 313 |
| FbaI | TGATCA | 1 cut(s) | 801 |
| FblI | GTMKAC | 1 cut(s) | 906 |
| Fnu4HI | GCNGC | 1 cut(s) | 123 |
| FriOI | GRGCYC | 2 cut(s) | 612, 933 |
| Fsp4HI | GCNGC | 1 cut(s) | 123 |
| FspBI | CTAG | 5 cut(s) | 44, 92, 517, 605, 721 |
| GluI | GCNGC | 1 cut(s) | 123 |
| GsaI | CCCAGC | 2 cut(s) | 195, 557 |
| HaeIII | GGCC | 5 cut(s) | 344, 475, 599, 859, 989 |
| HapII | CCGG | 2 cut(s) | 832, 937 |
| HgaI | GACGC | 3 cut(s) | 706, 854, 917 |
| Hin1II | CATG | 4 cut(s) | 376, 545, 695, 892 |
| HincII | GTYRAC | 3 cut(s) | 33, 180, 907 |
| HindII | GTYRAC | 3 cut(s) | 33, 180, 907 |
| HinfI | GANTC | 4 cut(s) | 334, 399, 796, 880 |
| HpaII | CCGG | 2 cut(s) | 832, 937 |
| HphI | GGTGA | 1 cut(s) | 786 |
| Hpy166II | GTNNAC | 8 cut(s) | 33, 61, 180, 452, 632, 707, 828, 907 |
| Hpy188I | TCNGA | 7 cut(s) | 145, 249, 795, 801, 900, 920, 1015 |
| Hpy188III | TCNNGA | 4 cut(s) | 159, 593, 613, 721 |
| Hpy8I | GTNNAC | 8 cut(s) | 33, 61, 180, 452, 632, 707, 828, 907 |
| Hpy99I | CGWCG | 3 cut(s) | 75, 848, 911 |
| HpyAV | CCTTC | 2 cut(s) | 25, 823 |
| HpyCH4III | ACNGT | 3 cut(s) | 166, 629, 741 |
| HpyCH4IV | ACGT | 1 cut(s) | 1010 |
| HpyCH4V | TGCA | 4 cut(s) | 216, 376, 579, 957 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpyF3I | CTNAG | 4 cut(s) | 332, 792, 897, 971 |
| HpySE526I | ACGT | 1 cut(s) | 1010 |
| Hsp92II | CATG | 4 cut(s) | 376, 545, 695, 892 |
| Ksp22I | TGATCA | 1 cut(s) | 801 |
| Kzo9I | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| LmnI | GCTCC | 2 cut(s) | 714, 1038 |
| LweI | GCATC | 1 cut(s) | 957 |
| MabI | ACCWGGT | 1 cut(s) | 496 |
| MaeI | CTAG | 5 cut(s) | 44, 92, 517, 605, 721 |
| MaeII | ACGT | 1 cut(s) | 1010 |
| MalI | GATC | 8 cut(s) | 4, 107, 151, 485, 665, 788, 803, 976 |
| MboI | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| MboII | GAAGA | 2 cut(s) | 87, 889 |
| MflI | RGATCY | 1 cut(s) | 2 |
| MhlI | GDGCHC | 2 cut(s) | 612, 933 |
| MlsI | TGGCCA | 1 cut(s) | 989 |
| MluCI | AATT | 8 cut(s) | 115, 236, 368, 534, 569, 753, 994, 1018 |
| MluNI | TGGCCA | 1 cut(s) | 989 |
| MlyI | GAGTC | 2 cut(s) | 343, 889 |
| MnlI | CCTC | 7 cut(s) | 163, 440, 589, 611, 674, 721, 801 |
| Mox20I | TGGCCA | 1 cut(s) | 989 |
| MroXI | GAANNNNTTC | 1 cut(s) | 757 |
| MscI | TGGCCA | 1 cut(s) | 989 |
| MseI | TTAA | 2 cut(s) | 202, 997 |
| MslI | CAYNNNNRTG | 2 cut(s) | 354, 407 |
| Msp20I | TGGCCA | 1 cut(s) | 989 |
| MspI | CCGG | 2 cut(s) | 832, 937 |
| MspR9I | CCNGG | 5 cut(s) | 346, 477, 498, 832, 991 |
| MvaI | CCWGG | 4 cut(s) | 346, 477, 498, 991 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NciI | CCSGG | 1 cut(s) | 832 |
| NcoI | CCATGG | 1 cut(s) | 541 |
| NdeI | CATATG | 1 cut(s) | 313 |
| NdeII | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| NlaIII | CATG | 4 cut(s) | 376, 545, 695, 892 |
| NlaIV | GGNNCC | 1 cut(s) | 760 |
| PceI | AGGCCT | 1 cut(s) | 344 |
| PdmI | GAANNNNTTC | 1 cut(s) | 757 |
| PfeI | GAWTC | 2 cut(s) | 399, 796 |
| PinAI | ACCGGT | 1 cut(s) | 936 |
| PkrI | GCNGC | 1 cut(s) | 124 |
| Ple19I | CGATCG | 1 cut(s) | 108 |
| PleI | GAGTC | 2 cut(s) | 342, 888 |
| PpsI | GAGTC | 2 cut(s) | 342, 888 |
| PshBI | ATTAAT | 1 cut(s) | 997 |
| Psp6I | CCWGG | 4 cut(s) | 344, 475, 496, 989 |
| PspFI | CCCAGC | 2 cut(s) | 191, 553 |
| PspGI | CCWGG | 4 cut(s) | 344, 475, 496, 989 |
| PspN4I | GGNNCC | 1 cut(s) | 760 |
| PspPI | GGNCC | 1 cut(s) | 598 |
| PstNI | CAGNNNCTG | 1 cut(s) | 799 |
| PsuI | RGATCY | 1 cut(s) | 2 |
| PvuI | CGATCG | 1 cut(s) | 108 |
| RsaI | GTAC | 2 cut(s) | 416, 639 |
| RsaNI | GTAC | 2 cut(s) | 415, 638 |
| RseI | CAYNNNNRTG | 2 cut(s) | 354, 407 |
| SalI | GTCGAC | 1 cut(s) | 905 |
| SaqAI | TTAA | 2 cut(s) | 202, 997 |
| SatI | GCNGC | 1 cut(s) | 123 |
| Sau3AI | GATC | 8 cut(s) | 2, 105, 149, 483, 663, 786, 801, 974 |
| Sau96I | GGNCC | 1 cut(s) | 598 |
| SchI | GAGTC | 2 cut(s) | 343, 889 |
| ScrFI | CCNGG | 5 cut(s) | 346, 477, 498, 832, 991 |
| SduI | GDGCHC | 2 cut(s) | 612, 933 |
| SexAI | ACCWGGT | 1 cut(s) | 496 |
| SfaNI | GCATC | 1 cut(s) | 957 |
| SfcI | CTRYAG | 1 cut(s) | 165 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 354, 407 |
| SmlI | CTYRAG | 1 cut(s) | 611 |
| SmoI | CTYRAG | 1 cut(s) | 611 |
| SpeI | ACTAGT | 1 cut(s) | 43 |
| Sse9I | AATT | 8 cut(s) | 115, 236, 368, 534, 569, 753, 994, 1018 |
| SseBI | AGGCCT | 1 cut(s) | 344 |
| SsiI | CCGC | 2 cut(s) | 123, 750 |
| SspMI | CTAG | 5 cut(s) | 44, 92, 517, 605, 721 |
| StuI | AGGCCT | 1 cut(s) | 344 |
| StyD4I | CCNGG | 5 cut(s) | 344, 475, 496, 830, 989 |
| StyI | CCWWGG | 3 cut(s) | 294, 541, 604 |
| TaaI | ACNGT | 3 cut(s) | 166, 629, 741 |
| TaiI | ACGT | 1 cut(s) | 1013 |
| TaqI | TCGA | 5 cut(s) | 108, 492, 662, 744, 906 |
| TasI | AATT | 8 cut(s) | 115, 236, 368, 534, 569, 753, 994, 1018 |
| TatI | WGTACW | 1 cut(s) | 414 |
| TauI | GCSGC | 1 cut(s) | 125 |
| TfiI | GAWTC | 2 cut(s) | 399, 796 |
| Tru1I | TTAA | 2 cut(s) | 202, 997 |
| Tru9I | TTAA | 2 cut(s) | 202, 997 |
| TscAI | CASTG | 3 cut(s) | 42, 93, 931 |
| TspDTI | ATGAA | 4 cut(s) | 361, 380, 539, 581 |
| TspRI | CASTG | 3 cut(s) | 42, 93, 931 |
| VspI | ATTAAT | 1 cut(s) | 997 |
| XapI | RAATTY | 2 cut(s) | 368, 1018 |
| XbaI | TCTAGA | 1 cut(s) | 720 |
| XmaJI | CCTAGG | 1 cut(s) | 604 |
| XmiI | GTMKAC | 1 cut(s) | 906 |
| XmnI | GAANNNNTTC | 1 cut(s) | 757 |
| XspI | CTAG | 5 cut(s) | 44, 92, 517, 605, 721 |