ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 344, 533 |
| AclWI | GGATC | 1 cut(s) | 171 |
| AfaI | GTAC | 2 cut(s) | 69, 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 309 |
| AgsI | TTSAA | 2 cut(s) | 353, 453 |
| AjnI | CCWGG | 2 cut(s) | 52, 460 |
| AluBI | AGCT | 2 cut(s) | 280, 335 |
| AluI | AGCT | 2 cut(s) | 280, 335 |
| Alw21I | GWGCWC | 1 cut(s) | 282 |
| AlwI | GGATC | 1 cut(s) | 171 |
| AoxI | GGCC | 3 cut(s) | 75, 463, 554 |
| AspS9I | GGNCC | 3 cut(s) | 76, 346, 464 |
| AsuC2I | CCSGG | 1 cut(s) | 329 |
| AsuHPI | GGTGA | 1 cut(s) | 393 |
| AsuII | TTCGAA | 1 cut(s) | 63 |
| AvaII | GGWCC | 1 cut(s) | 346 |
| BanII | GRGCYC | 1 cut(s) | 282 |
| BbsI | GAAGAC | 1 cut(s) | 396 |
| Bbv12I | GWGCWC | 1 cut(s) | 282 |
| BccI | CCATC | 2 cut(s) | 152, 464 |
| BceAI | ACGGC | 1 cut(s) | 189 |
| BciT130I | CCWGG | 2 cut(s) | 54, 462 |
| BcnI | CCSGG | 1 cut(s) | 329 |
| BfmI | CTRYAG | 2 cut(s) | 336, 550 |
| BmcAI | AGTACT | 1 cut(s) | 293 |
| Bme1390I | CCNGG | 3 cut(s) | 54, 329, 462 |
| Bme18I | GGWCC | 1 cut(s) | 346 |
| BmgT120I | GGNCC | 3 cut(s) | 76, 346, 464 |
| BmrFI | CCNGG | 3 cut(s) | 54, 329, 462 |
| BmsI | GCATC | 3 cut(s) | 370, 432, 454 |
| BpiI | GAAGAC | 1 cut(s) | 396 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 531, 563 |
| Bpu14I | TTCGAA | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BpuMI | CCSGG | 1 cut(s) | 329 |
| BsaBI | GATNNNNATC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 2 cut(s) | 366, 460 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 309 |
| Bse3DI | GCAATG | 2 cut(s) | 152, 387 |
| Bse8I | GATNNNNATC | 1 cut(s) | 162 |
| BseBI | CCWGG | 2 cut(s) | 54, 462 |
| BseDI | CCNNGG | 2 cut(s) | 366, 460 |
| BseGI | GGATG | 6 cut(s) | 31, 163, 361, 445, 480, 526 |
| BseJI | GATNNNNATC | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 309 |
| BseMI | GCAATG | 2 cut(s) | 152, 387 |
| BseMII | CTCAG | 1 cut(s) | 579 |
| BshFI | GGCC | 3 cut(s) | 77, 465, 556 |
| BsiHKAI | GWGCWC | 1 cut(s) | 282 |
| BsiSI | CCGG | 1 cut(s) | 329 |
| BslFI | GGGAC | 1 cut(s) | 442 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 309 |
| BsmFI | GGGAC | 1 cut(s) | 442 |
| BsmI | GAATGC | 1 cut(s) | 359 |
| BsnI | GGCC | 3 cut(s) | 77, 465, 556 |
| Bsp119I | TTCGAA | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 1 cut(s) | 282 |
| Bsp143I | GATC | 2 cut(s) | 134, 163 |
| BspACI | CCGC | 2 cut(s) | 344, 533 |
| BspANI | GGCC | 3 cut(s) | 77, 465, 556 |
| BspCNI | CTCAG | 1 cut(s) | 578 |
| BspPI | GGATC | 1 cut(s) | 171 |
| BspT104I | TTCGAA | 1 cut(s) | 63 |
| BsrDI | GCAATG | 2 cut(s) | 152, 387 |
| BssECI | CCNNGG | 2 cut(s) | 366, 460 |
| BssMI | GATC | 2 cut(s) | 134, 163 |
| BssT1I | CCWWGG | 1 cut(s) | 366 |
| Bst2UI | CCWGG | 2 cut(s) | 54, 462 |
| BstBI | TTCGAA | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 2 cut(s) | 192, 359 |
| BstDEI | CTNAG | 1 cut(s) | 565 |
| BstF5I | GGATG | 6 cut(s) | 31, 163, 361, 445, 480, 526 |
| BstKTI | GATC | 2 cut(s) | 137, 166 |
| BstMBI | GATC | 2 cut(s) | 134, 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 341 |
| BstNI | CCWGG | 2 cut(s) | 54, 462 |
| BstSCI | CCNGG | 3 cut(s) | 52, 327, 460 |
| BstSFI | CTRYAG | 2 cut(s) | 336, 550 |
| BstV2I | GAAGAC | 1 cut(s) | 396 |
| BsuRI | GGCC | 3 cut(s) | 77, 465, 556 |
| BtsCI | GGATG | 6 cut(s) | 31, 163, 361, 445, 480, 526 |
| Cac8I | GCNNGC | 2 cut(s) | 192, 359 |
| Cfr13I | GGNCC | 3 cut(s) | 76, 346, 464 |
| Csp6I | GTAC | 2 cut(s) | 68, 292 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviQI | GTAC | 2 cut(s) | 68, 292 |
| DdeI | CTNAG | 1 cut(s) | 565 |
| DpnI | GATC | 2 cut(s) | 136, 165 |
| DpnII | GATC | 2 cut(s) | 134, 163 |
| Ecl136II | GAGCTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 1 cut(s) | 366 |
| Eco24I | GRGCYC | 1 cut(s) | 282 |
| Eco47I | GGWCC | 1 cut(s) | 346 |
| Eco53kI | GAGCTC | 1 cut(s) | 280 |
| EcoICRI | GAGCTC | 1 cut(s) | 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 76 |
| EcoRII | CCWGG | 2 cut(s) | 52, 460 |
| EcoT14I | CCWWGG | 1 cut(s) | 366 |
| EcoT22I | ATGCAT | 1 cut(s) | 447 |
| EcoT38I | GRGCYC | 1 cut(s) | 282 |
| ErhI | CCWWGG | 1 cut(s) | 366 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 5 cut(s) | 15, 186, 297, 530, 552 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 333, 365, 415, 447 |
| FaqI | GGGAC | 1 cut(s) | 442 |
| FatI | CATG | 1 cut(s) | 13 |
| FokI | GGATG | 6 cut(s) | 38, 170, 348, 432, 487, 533 |
| FriOI | GRGCYC | 1 cut(s) | 282 |
| HaeIII | GGCC | 3 cut(s) | 77, 465, 556 |
| HapII | CCGG | 1 cut(s) | 329 |
| Hin1II | CATG | 1 cut(s) | 17 |
| HinfI | GANTC | 4 cut(s) | 10, 542, 570, 596 |
| HpaII | CCGG | 1 cut(s) | 329 |
| HphI | GGTGA | 1 cut(s) | 393 |
| Hpy166II | GTNNAC | 1 cut(s) | 252 |
| Hpy188I | TCNGA | 3 cut(s) | 325, 441, 601 |
| Hpy188III | TCNNGA | 3 cut(s) | 138, 493, 567 |
| Hpy8I | GTNNAC | 1 cut(s) | 252 |
| HpyAV | CCTTC | 3 cut(s) | 198, 236, 459 |
| HpyCH4V | TGCA | 4 cut(s) | 145, 361, 380, 445 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 341 |
| HpyF3I | CTNAG | 1 cut(s) | 565 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| Kzo9I | GATC | 2 cut(s) | 134, 163 |
| LweI | GCATC | 3 cut(s) | 370, 432, 454 |
| MaeIII | GTNAC | 2 cut(s) | 89, 167 |
| MalI | GATC | 2 cut(s) | 136, 165 |
| MboI | GATC | 2 cut(s) | 134, 163 |
| MboII | GAAGA | 3 cut(s) | 401, 481, 614 |
| MfeI | CAATTG | 1 cut(s) | 507 |
| MhlI | GDGCHC | 1 cut(s) | 282 |
| MluCI | AATT | 4 cut(s) | 20, 83, 98, 507 |
| MlyI | GAGTC | 1 cut(s) | 579 |
| MmeI | TCCRAC | 2 cut(s) | 517, 598 |
| MnlI | CCTC | 2 cut(s) | 120, 205 |
| Mph1103I | ATGCAT | 1 cut(s) | 447 |
| MseI | TTAA | 2 cut(s) | 222, 273 |
| MspI | CCGG | 1 cut(s) | 329 |
| MspR9I | CCNGG | 3 cut(s) | 54, 329, 462 |
| MunI | CAATTG | 1 cut(s) | 507 |
| Mva1269I | GAATGC | 1 cut(s) | 359 |
| MvaI | CCWGG | 2 cut(s) | 54, 462 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 341 |
| NciI | CCSGG | 1 cut(s) | 329 |
| NdeII | GATC | 2 cut(s) | 134, 163 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NsiI | ATGCAT | 1 cut(s) | 447 |
| NspV | TTCGAA | 1 cut(s) | 63 |
| PctI | GAATGC | 1 cut(s) | 359 |
| PfeI | GAWTC | 3 cut(s) | 10, 542, 596 |
| PleI | GAGTC | 1 cut(s) | 578 |
| PpsI | GAGTC | 1 cut(s) | 578 |
| Psp124BI | GAGCTC | 1 cut(s) | 282 |
| Psp6I | CCWGG | 2 cut(s) | 52, 460 |
| PspGI | CCWGG | 2 cut(s) | 52, 460 |
| PspPI | GGNCC | 3 cut(s) | 76, 346, 464 |
| RsaI | GTAC | 2 cut(s) | 69, 293 |
| RsaNI | GTAC | 2 cut(s) | 68, 292 |
| SacI | GAGCTC | 1 cut(s) | 282 |
| SaqAI | TTAA | 2 cut(s) | 222, 273 |
| Sau3AI | GATC | 2 cut(s) | 134, 163 |
| Sau96I | GGNCC | 3 cut(s) | 76, 346, 464 |
| ScaI | AGTACT | 1 cut(s) | 293 |
| SchI | GAGTC | 1 cut(s) | 579 |
| ScrFI | CCNGG | 3 cut(s) | 54, 329, 462 |
| SduI | GDGCHC | 1 cut(s) | 282 |
| SetI | ASST | 8 cut(s) | 58, 209, 229, 282, 337, 372, 396, 617 |
| SfaNI | GCATC | 3 cut(s) | 370, 432, 454 |
| SfcI | CTRYAG | 2 cut(s) | 336, 550 |
| SfuI | TTCGAA | 1 cut(s) | 63 |
| SinI | GGWCC | 1 cut(s) | 346 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| Sse9I | AATT | 4 cut(s) | 20, 83, 98, 507 |
| SsiI | CCGC | 2 cut(s) | 344, 533 |
| SstI | GAGCTC | 1 cut(s) | 282 |
| StyD4I | CCNGG | 3 cut(s) | 52, 327, 460 |
| StyI | CCWWGG | 1 cut(s) | 366 |
| TaqI | TCGA | 3 cut(s) | 63, 211, 513 |
| TasI | AATT | 4 cut(s) | 20, 83, 98, 507 |
| TatI | WGTACW | 2 cut(s) | 67, 291 |
| TfiI | GAWTC | 3 cut(s) | 10, 542, 596 |
| Tru1I | TTAA | 2 cut(s) | 222, 273 |
| Tru9I | TTAA | 2 cut(s) | 222, 273 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 9 cut(s) | 17, 50, 111, 129, 173, 255, 312, 398, 402 |
| VpaK11BI | GGWCC | 1 cut(s) | 346 |
| ZrmI | AGTACT | 1 cut(s) | 293 |
| Zsp2I | ATGCAT | 1 cut(s) | 447 |