ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 256 |
| Acc36I | ACCTGC | 1 cut(s) | 256 |
| AciI | CCGC | 3 cut(s) | 68, 139, 572 |
| AcsI | RAATTY | 2 cut(s) | 87, 364 |
| AfaI | GTAC | 1 cut(s) | 164 |
| AflIII | ACRYGT | 1 cut(s) | 277 |
| AgsI | TTSAA | 3 cut(s) | 179, 427, 461 |
| AluBI | AGCT | 5 cut(s) | 151, 196, 338, 389, 530 |
| AluI | AGCT | 5 cut(s) | 151, 196, 338, 389, 530 |
| Alw26I | GTCTC | 1 cut(s) | 316 |
| ApeKI | GCWGC | 3 cut(s) | 101, 148, 527 |
| ApoI | RAATTY | 2 cut(s) | 87, 364 |
| AsuC2I | CCSGG | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 4 cut(s) | 62, 237, 322, 496 |
| BaeGI | GKGCMC | 1 cut(s) | 518 |
| BbvI | GCAGC | 3 cut(s) | 113, 160, 539 |
| BccI | CCATC | 1 cut(s) | 347 |
| BcnI | CCSGG | 1 cut(s) | 57 |
| BcoDI | GTCTC | 1 cut(s) | 316 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BfmI | CTRYAG | 1 cut(s) | 168 |
| BfuAI | ACCTGC | 1 cut(s) | 256 |
| BglII | AGATCT | 1 cut(s) | 540 |
| BisI | GCNGC | 3 cut(s) | 102, 149, 528 |
| BlsI | GCNGC | 3 cut(s) | 103, 150, 529 |
| Bme1390I | CCNGG | 1 cut(s) | 57 |
| BmrFI | CCNGG | 1 cut(s) | 57 |
| BmsI | GCATC | 2 cut(s) | 126, 514 |
| BpuEI | CTTGAG | 1 cut(s) | 340 |
| BpuMI | CCSGG | 1 cut(s) | 57 |
| Bse3DI | GCAATG | 1 cut(s) | 272 |
| BseGI | GGATG | 1 cut(s) | 20 |
| BseMI | GCAATG | 1 cut(s) | 272 |
| BseMII | CTCAG | 1 cut(s) | 501 |
| BseSI | GKGCMC | 1 cut(s) | 518 |
| BseXI | GCAGC | 3 cut(s) | 113, 160, 539 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BsiSI | CCGG | 1 cut(s) | 56 |
| BsmAI | GTCTC | 1 cut(s) | 316 |
| Bsp1286I | GDGCHC | 1 cut(s) | 518 |
| Bsp143I | GATC | 4 cut(s) | 10, 112, 329, 540 |
| BspACI | CCGC | 3 cut(s) | 68, 139, 572 |
| BspCNI | CTCAG | 1 cut(s) | 502 |
| BspMI | ACCTGC | 1 cut(s) | 256 |
| BspQI | GCTCTTC | 1 cut(s) | 255 |
| BsrDI | GCAATG | 1 cut(s) | 272 |
| BssMI | GATC | 4 cut(s) | 10, 112, 329, 540 |
| Bst4CI | ACNGT | 1 cut(s) | 373 |
| Bst6I | CTCTTC | 1 cut(s) | 255 |
| BstC8I | GCNNGC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 1 cut(s) | 510 |
| BstF5I | GGATG | 1 cut(s) | 20 |
| BstKTI | GATC | 4 cut(s) | 13, 115, 332, 543 |
| BstMAI | GTCTC | 1 cut(s) | 316 |
| BstMBI | GATC | 4 cut(s) | 10, 112, 329, 540 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 145 |
| BstNSI | RCATGY | 1 cut(s) | 281 |
| BstSCI | CCNGG | 1 cut(s) | 55 |
| BstSFI | CTRYAG | 1 cut(s) | 168 |
| BstSLI | GKGCMC | 1 cut(s) | 518 |
| BstV1I | GCAGC | 3 cut(s) | 113, 160, 539 |
| BstX2I | RGATCY | 1 cut(s) | 540 |
| BstYI | RGATCY | 1 cut(s) | 540 |
| BtsCI | GGATG | 1 cut(s) | 20 |
| BtsIMutI | CAGTG | 2 cut(s) | 507, 516 |
| BveI | ACCTGC | 1 cut(s) | 256 |
| Cac8I | GCNNGC | 1 cut(s) | 210 |
| Csp6I | GTAC | 1 cut(s) | 163 |
| CviAII | CATG | 4 cut(s) | 126, 159, 278, 361 |
| CviJI | RGCY | 6 cut(s) | 151, 196, 212, 338, 389, 530 |
| CviKI_1 | RGCY | 6 cut(s) | 151, 196, 212, 338, 389, 530 |
| CviQI | GTAC | 1 cut(s) | 163 |
| DdeI | CTNAG | 1 cut(s) | 510 |
| DpnI | GATC | 4 cut(s) | 12, 114, 331, 542 |
| DpnII | GATC | 4 cut(s) | 10, 112, 329, 540 |
| Eam1104I | CTCTTC | 1 cut(s) | 255 |
| EarI | CTCTTC | 1 cut(s) | 255 |
| EcoRI | GAATTC | 1 cut(s) | 364 |
| FaeI | CATG | 4 cut(s) | 129, 162, 281, 364 |
| FatI | CATG | 4 cut(s) | 125, 158, 277, 360 |
| FauI | CCCGC | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 3 cut(s) | 102, 149, 528 |
| FokI | GGATG | 1 cut(s) | 7 |
| Fsp4HI | GCNGC | 3 cut(s) | 102, 149, 528 |
| FspBI | CTAG | 1 cut(s) | 120 |
| GluI | GCNGC | 3 cut(s) | 102, 149, 528 |
| HapII | CCGG | 1 cut(s) | 56 |
| Hin1II | CATG | 4 cut(s) | 129, 162, 281, 364 |
| HindIII | AAGCTT | 1 cut(s) | 387 |
| HinfI | GANTC | 1 cut(s) | 130 |
| HpaII | CCGG | 1 cut(s) | 56 |
| HphI | GGTGA | 4 cut(s) | 62, 237, 322, 496 |
| Hpy166II | GTNNAC | 2 cut(s) | 53, 165 |
| Hpy188I | TCNGA | 4 cut(s) | 117, 135, 538, 586 |
| Hpy188III | TCNNGA | 1 cut(s) | 333 |
| Hpy8I | GTNNAC | 2 cut(s) | 53, 165 |
| HpyAV | CCTTC | 1 cut(s) | 412 |
| HpyCH4III | ACNGT | 1 cut(s) | 373 |
| HpyCH4V | TGCA | 7 cut(s) | 101, 148, 208, 251, 283, 302, 527 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 145 |
| HpyF3I | CTNAG | 1 cut(s) | 510 |
| Hsp92II | CATG | 4 cut(s) | 129, 162, 281, 364 |
| Kzo9I | GATC | 4 cut(s) | 10, 112, 329, 540 |
| LguI | GCTCTTC | 1 cut(s) | 255 |
| LpnPI | CCDG | 3 cut(s) | 69, 261, 293 |
| Lsp1109I | GCAGC | 3 cut(s) | 113, 160, 539 |
| LweI | GCATC | 2 cut(s) | 126, 514 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MaeIII | GTNAC | 1 cut(s) | 565 |
| MalI | GATC | 4 cut(s) | 12, 114, 331, 542 |
| MboI | GATC | 4 cut(s) | 10, 112, 329, 540 |
| MboII | GAAGA | 3 cut(s) | 272, 439, 473 |
| MflI | RGATCY | 1 cut(s) | 540 |
| MhlI | GDGCHC | 1 cut(s) | 518 |
| MluCI | AATT | 3 cut(s) | 87, 202, 364 |
| MnlI | CCTC | 3 cut(s) | 75, 281, 505 |
| MseI | TTAA | 1 cut(s) | 347 |
| MslI | CAYNNNNRTG | 2 cut(s) | 36, 557 |
| MspI | CCGG | 1 cut(s) | 56 |
| MspR9I | CCNGG | 1 cut(s) | 57 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 145 |
| NciI | CCSGG | 1 cut(s) | 57 |
| NdeII | GATC | 4 cut(s) | 10, 112, 329, 540 |
| NlaIII | CATG | 4 cut(s) | 129, 162, 281, 364 |
| NspI | RCATGY | 1 cut(s) | 281 |
| PaqCI | CACCTGC | 1 cut(s) | 256 |
| PciI | ACATGT | 1 cut(s) | 277 |
| PciSI | GCTCTTC | 1 cut(s) | 255 |
| PfeI | GAWTC | 1 cut(s) | 130 |
| PkrI | GCNGC | 3 cut(s) | 103, 150, 529 |
| PscI | ACATGT | 1 cut(s) | 277 |
| PsuI | RGATCY | 1 cut(s) | 540 |
| RsaI | GTAC | 1 cut(s) | 164 |
| RsaNI | GTAC | 1 cut(s) | 163 |
| RseI | CAYNNNNRTG | 2 cut(s) | 36, 557 |
| SapI | GCTCTTC | 1 cut(s) | 255 |
| SaqAI | TTAA | 1 cut(s) | 347 |
| SatI | GCNGC | 3 cut(s) | 102, 149, 528 |
| Sau3AI | GATC | 4 cut(s) | 10, 112, 329, 540 |
| ScrFI | CCNGG | 1 cut(s) | 57 |
| SduI | GDGCHC | 1 cut(s) | 518 |
| SetI | ASST | 8 cut(s) | 153, 198, 250, 312, 340, 391, 459, 532 |
| SfaNI | GCATC | 2 cut(s) | 126, 514 |
| SfcI | CTRYAG | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 36, 557 |
| SmlI | CTYRAG | 1 cut(s) | 319 |
| SmoI | CTYRAG | 1 cut(s) | 319 |
| Sse9I | AATT | 3 cut(s) | 87, 202, 364 |
| SsiI | CCGC | 3 cut(s) | 68, 139, 572 |
| SspMI | CTAG | 1 cut(s) | 120 |
| StyD4I | CCNGG | 1 cut(s) | 55 |
| TaaI | ACNGT | 1 cut(s) | 373 |
| TasI | AATT | 3 cut(s) | 87, 202, 364 |
| TfiI | GAWTC | 1 cut(s) | 130 |
| Tru1I | TTAA | 1 cut(s) | 347 |
| Tru9I | TTAA | 1 cut(s) | 347 |
| TscAI | CASTG | 2 cut(s) | 514, 523 |
| TseI | GCWGC | 3 cut(s) | 101, 148, 527 |
| TspDTI | ATGAA | 8 cut(s) | 233, 245, 273, 368, 377, 431, 575, 593 |
| TspRI | CASTG | 2 cut(s) | 514, 523 |
| XapI | RAATTY | 2 cut(s) | 87, 364 |
| XceI | RCATGY | 1 cut(s) | 281 |
| XspI | CTAG | 1 cut(s) | 120 |