Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 93 |
| AccI | GTMKAC | 1 cut(s) | 67 |
| AclWI | GGATC | 3 cut(s) | 221, 287, 444 |
| AcoI | YGGCCR | 1 cut(s) | 591 |
| AcuI | CTGAAG | 1 cut(s) | 590 |
| AcyI | GRCGYC | 1 cut(s) | 94 |
| AfaI | GTAC | 1 cut(s) | 496 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 589 |
| AgsI | TTSAA | 1 cut(s) | 407 |
| AhlI | ACTAGT | 1 cut(s) | 518 |
| AjnI | CCWGG | 1 cut(s) | 427 |
| AluBI | AGCT | 2 cut(s) | 161, 449 |
| AluI | AGCT | 2 cut(s) | 161, 449 |
| AlwI | GGATC | 3 cut(s) | 221, 287, 444 |
| AoxI | GGCC | 2 cut(s) | 431, 591 |
| ApeKI | GCWGC | 1 cut(s) | 7 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 260 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AspS9I | GGNCC | 1 cut(s) | 431 |
| AsuHPI | GGTGA | 1 cut(s) | 355 |
| AsuNHI | GCTAGC | 1 cut(s) | 161 |
| BalI | TGGCCA | 1 cut(s) | 593 |
| BanI | GGYRCC | 1 cut(s) | 93 |
| BanII | GRGCYC | 1 cut(s) | 304 |
| BarI | GAAGNNNNNNTAC | 5 cut(s) | 28, 166, 198, 499, 531 |
| BbsI | GAAGAC | 2 cut(s) | 239, 265 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BccI | CCATC | 2 cut(s) | 119, 424 |
| BciT130I | CCWGG | 1 cut(s) | 429 |
| BcuI | ACTAGT | 1 cut(s) | 518 |
| BfaI | CTAG | 3 cut(s) | 105, 162, 519 |
| BfoI | RGCGCY | 1 cut(s) | 97 |
| BisI | GCNGC | 1 cut(s) | 8 |
| BlsI | GCNGC | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 1 cut(s) | 429 |
| BmgT120I | GGNCC | 1 cut(s) | 431 |
| BmiI | GGNNCC | 1 cut(s) | 95 |
| BmrFI | CCNGG | 1 cut(s) | 429 |
| BmtI | GCTAGC | 1 cut(s) | 165 |
| BpiI | GAAGAC | 2 cut(s) | 239, 265 |
| Bpu10I | CCTNAGC | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 1 cut(s) | 104 |
| BsaAI | YACGTR | 1 cut(s) | 191 |
| BsaHI | GRCGYC | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 1 cut(s) | 428 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 30, 60 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 589 |
| Bse1I | ACTGG | 1 cut(s) | 329 |
| BseBI | CCWGG | 1 cut(s) | 429 |
| BseDI | CCNNGG | 1 cut(s) | 428 |
| BseGI | GGATG | 3 cut(s) | 130, 208, 541 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 589 |
| BseMII | CTCAG | 1 cut(s) | 12 |
| BseNI | ACTGG | 1 cut(s) | 329 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| BshFI | GGCC | 2 cut(s) | 433, 593 |
| BshNI | GGYRCC | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 434 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 589 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| BsmI | GAATGC | 1 cut(s) | 325 |
| BsnI | GGCC | 2 cut(s) | 433, 593 |
| Bsp1286I | GDGCHC | 1 cut(s) | 304 |
| Bsp143I | GATC | 3 cut(s) | 226, 292, 436 |
| BspANI | GGCC | 2 cut(s) | 433, 593 |
| BspCNI | CTCAG | 1 cut(s) | 13 |
| BspHI | TCATGA | 1 cut(s) | 252 |
| BspLI | GGNNCC | 1 cut(s) | 95 |
| BspOI | GCTAGC | 1 cut(s) | 165 |
| BspPI | GGATC | 3 cut(s) | 221, 287, 444 |
| BspT107I | GGYRCC | 1 cut(s) | 93 |
| BsrI | ACTGG | 1 cut(s) | 329 |
| BssECI | CCNNGG | 1 cut(s) | 428 |
| BssMI | GATC | 3 cut(s) | 226, 292, 436 |
| BssNAI | GTATAC | 1 cut(s) | 68 |
| BssNI | GRCGYC | 1 cut(s) | 94 |
| Bst1107I | GTATAC | 1 cut(s) | 68 |
| Bst2UI | CCWGG | 1 cut(s) | 429 |
| BstACI | GRCGYC | 1 cut(s) | 94 |
| BstBAI | YACGTR | 1 cut(s) | 191 |
| BstC8I | GCNNGC | 1 cut(s) | 163 |
| BstDEI | CTNAG | 2 cut(s) | 21, 420 |
| BstF5I | GGATG | 3 cut(s) | 130, 208, 541 |
| BstH2I | RGCGCY | 1 cut(s) | 97 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstKTI | GATC | 3 cut(s) | 229, 295, 439 |
| BstMBI | GATC | 3 cut(s) | 226, 292, 436 |
| BstNI | CCWGG | 1 cut(s) | 429 |
| BstSCI | CCNGG | 1 cut(s) | 427 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BstV2I | GAAGAC | 2 cut(s) | 239, 265 |
| BstZ17I | GTATAC | 1 cut(s) | 68 |
| BsuRI | GGCC | 2 cut(s) | 433, 593 |
| BtsCI | GGATG | 3 cut(s) | 130, 208, 541 |
| BtsIMutI | CAGTG | 2 cut(s) | 288, 375 |
| Cac8I | GCNNGC | 1 cut(s) | 163 |
| CciI | TCATGA | 1 cut(s) | 252 |
| CfoI | GCGC | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 1 cut(s) | 431 |
| Csp6I | GTAC | 1 cut(s) | 495 |
| CviAII | CATG | 5 cut(s) | 50, 209, 253, 442, 595 |
| CviJI | RGCY | 7 cut(s) | 10, 118, 161, 302, 433, 449, 593 |
| CviKI_1 | RGCY | 7 cut(s) | 10, 118, 161, 302, 433, 449, 593 |
| CviQI | GTAC | 1 cut(s) | 495 |
| DdeI | CTNAG | 2 cut(s) | 21, 420 |
| DinI | GGCGCC | 1 cut(s) | 95 |
| DpnI | GATC | 3 cut(s) | 228, 294, 438 |
| DpnII | GATC | 3 cut(s) | 226, 292, 436 |
| EaeI | YGGCCR | 1 cut(s) | 591 |
| Eco24I | GRGCYC | 1 cut(s) | 304 |
| Eco57I | CTGAAG | 1 cut(s) | 590 |
| EcoRII | CCWGG | 1 cut(s) | 427 |
| EcoT38I | GRGCYC | 1 cut(s) | 304 |
| EgeI | GGCGCC | 1 cut(s) | 95 |
| EheI | GGCGCC | 1 cut(s) | 95 |
| FaeI | CATG | 5 cut(s) | 53, 212, 256, 445, 598 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FatI | CATG | 5 cut(s) | 49, 208, 252, 441, 594 |
| FblI | GTMKAC | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 1 cut(s) | 8 |
| FokI | GGATG | 3 cut(s) | 137, 215, 548 |
| FriOI | GRGCYC | 1 cut(s) | 304 |
| Fsp4HI | GCNGC | 1 cut(s) | 8 |
| FspBI | CTAG | 3 cut(s) | 105, 162, 519 |
| GlaI | GCGC | 1 cut(s) | 95 |
| GluI | GCNGC | 1 cut(s) | 8 |
| HaeII | RGCGCY | 1 cut(s) | 97 |
| HaeIII | GGCC | 2 cut(s) | 433, 593 |
| HapII | CCGG | 1 cut(s) | 434 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1I | GRCGYC | 1 cut(s) | 94 |
| Hin1II | CATG | 5 cut(s) | 53, 212, 256, 445, 598 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HinfI | GANTC | 3 cut(s) | 424, 539, 565 |
| HpaII | CCGG | 1 cut(s) | 434 |
| HphI | GGTGA | 1 cut(s) | 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 68 |
| Hpy188I | TCNGA | 4 cut(s) | 235, 462, 506, 570 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 253 |
| Hpy8I | GTNNAC | 1 cut(s) | 68 |
| HpyAV | CCTTC | 2 cut(s) | 240, 278 |
| HpyCH4IV | ACGT | 2 cut(s) | 190, 244 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 412, 598 |
| HpyF3I | CTNAG | 2 cut(s) | 21, 420 |
| HpySE526I | ACGT | 2 cut(s) | 190, 244 |
| Hsp92I | GRCGYC | 1 cut(s) | 94 |
| Hsp92II | CATG | 5 cut(s) | 53, 212, 256, 445, 598 |
| HspAI | GCGC | 1 cut(s) | 94 |
| KasI | GGCGCC | 1 cut(s) | 93 |
| Kzo9I | GATC | 3 cut(s) | 226, 292, 436 |
| LpnPI | CCDG | 7 cut(s) | 33, 110, 118, 342, 414, 441, 447 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| MaeI | CTAG | 3 cut(s) | 105, 162, 519 |
| MaeII | ACGT | 2 cut(s) | 190, 244 |
| MaeIII | GTNAC | 1 cut(s) | 337 |
| MalI | GATC | 3 cut(s) | 228, 294, 438 |
| MboI | GATC | 3 cut(s) | 226, 292, 436 |
| MboII | GAAGA | 5 cut(s) | 183, 239, 265, 445, 583 |
| MhlI | GDGCHC | 1 cut(s) | 304 |
| MlsI | TGGCCA | 1 cut(s) | 593 |
| MluCI | AATT | 3 cut(s) | 111, 221, 544 |
| MluNI | TGGCCA | 1 cut(s) | 593 |
| Mly113I | GGCGCC | 1 cut(s) | 94 |
| MlyI | GAGTC | 1 cut(s) | 433 |
| MmeI | TCCRAC | 1 cut(s) | 265 |
| MnlI | CCTC | 3 cut(s) | 25, 93, 193 |
| Mox20I | TGGCCA | 1 cut(s) | 593 |
| MroXI | GAANNNNTTC | 1 cut(s) | 260 |
| MscI | TGGCCA | 1 cut(s) | 593 |
| MslI | CAYNNNNRTG | 1 cut(s) | 556 |
| Msp20I | TGGCCA | 1 cut(s) | 593 |
| MspI | CCGG | 1 cut(s) | 434 |
| MspR9I | CCNGG | 1 cut(s) | 429 |
| Mva1269I | GAATGC | 1 cut(s) | 325 |
| MvaI | CCWGG | 1 cut(s) | 429 |
| NarI | GGCGCC | 1 cut(s) | 94 |
| NdeII | GATC | 3 cut(s) | 226, 292, 436 |
| NheI | GCTAGC | 1 cut(s) | 161 |
| NlaIII | CATG | 5 cut(s) | 53, 212, 256, 445, 598 |
| NlaIV | GGNNCC | 1 cut(s) | 95 |
| PagI | TCATGA | 1 cut(s) | 252 |
| PctI | GAATGC | 1 cut(s) | 325 |
| PdmI | GAANNNNTTC | 1 cut(s) | 260 |
| PfeI | GAWTC | 2 cut(s) | 539, 565 |
| PkrI | GCNGC | 1 cut(s) | 9 |
| PleI | GAGTC | 1 cut(s) | 432 |
| PluTI | GGCGCC | 1 cut(s) | 97 |
| PpsI | GAGTC | 1 cut(s) | 432 |
| Ppu21I | YACGTR | 1 cut(s) | 191 |
| Psp6I | CCWGG | 1 cut(s) | 427 |
| PspGI | CCWGG | 1 cut(s) | 427 |
| PspN4I | GGNNCC | 1 cut(s) | 95 |
| PspPI | GGNCC | 1 cut(s) | 431 |
| RsaI | GTAC | 1 cut(s) | 496 |
| RsaNI | GTAC | 1 cut(s) | 495 |
| RseI | CAYNNNNRTG | 1 cut(s) | 556 |
| SatI | GCNGC | 1 cut(s) | 8 |
| Sau3AI | GATC | 3 cut(s) | 226, 292, 436 |
| Sau96I | GGNCC | 1 cut(s) | 431 |
| SchI | GAGTC | 1 cut(s) | 433 |
| ScrFI | CCNGG | 1 cut(s) | 429 |
| SduI | GDGCHC | 1 cut(s) | 304 |
| SetI | ASST | 6 cut(s) | 104, 163, 193, 247, 339, 451 |
| SfoI | GGCGCC | 1 cut(s) | 95 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 556 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| SpeI | ACTAGT | 1 cut(s) | 518 |
| Sse9I | AATT | 3 cut(s) | 111, 221, 544 |
| SspDI | GGCGCC | 1 cut(s) | 93 |
| SspMI | CTAG | 3 cut(s) | 105, 162, 519 |
| StyD4I | CCNGG | 1 cut(s) | 427 |
| TaiI | ACGT | 2 cut(s) | 193, 247 |
| TasI | AATT | 3 cut(s) | 111, 221, 544 |
| TatI | WGTACW | 1 cut(s) | 494 |
| TfiI | GAWTC | 2 cut(s) | 539, 565 |
| TscAI | CASTG | 2 cut(s) | 295, 382 |
| TseI | GCWGC | 1 cut(s) | 7 |
| TspDTI | ATGAA | 8 cut(s) | 17, 140, 269, 332, 365, 369, 399, 552 |
| TspRI | CASTG | 2 cut(s) | 295, 382 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 193 |
| XmiI | GTMKAC | 1 cut(s) | 67 |
| XmnI | GAANNNNTTC | 1 cut(s) | 260 |
| XspI | CTAG | 3 cut(s) | 105, 162, 519 |