ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 243 |
| AciI | CCGC | 1 cut(s) | 27 |
| AclWI | GGATC | 1 cut(s) | 77 |
| AcyI | GRCGYC | 1 cut(s) | 240 |
| AgsI | TTSAA | 2 cut(s) | 52, 80 |
| AhlI | ACTAGT | 1 cut(s) | 205 |
| AluBI | AGCT | 1 cut(s) | 369 |
| AluI | AGCT | 1 cut(s) | 369 |
| Alw26I | GTCTC | 2 cut(s) | 11, 101 |
| AlwI | GGATC | 1 cut(s) | 77 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 195, 227 |
| BbsI | GAAGAC | 1 cut(s) | 88 |
| BbvI | GCAGC | 1 cut(s) | 137 |
| BcoDI | GTCTC | 2 cut(s) | 11, 101 |
| BcuI | ACTAGT | 1 cut(s) | 205 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| BmiI | GGNNCC | 1 cut(s) | 38 |
| BmsI | GCATC | 1 cut(s) | 238 |
| BpiI | GAAGAC | 1 cut(s) | 88 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BsaHI | GRCGYC | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseRI | GAGGAG | 1 cut(s) | 213 |
| BseXI | GCAGC | 1 cut(s) | 137 |
| BsmAI | GTCTC | 2 cut(s) | 11, 101 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspHI | TCATGA | 1 cut(s) | 425 |
| BspLI | GGNNCC | 1 cut(s) | 38 |
| BspPI | GGATC | 1 cut(s) | 77 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 82 |
| BssNI | GRCGYC | 1 cut(s) | 240 |
| BstACI | GRCGYC | 1 cut(s) | 240 |
| BstC8I | GCNNGC | 2 cut(s) | 29, 367 |
| BstDEI | CTNAG | 1 cut(s) | 11 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMAI | GTCTC | 2 cut(s) | 11, 101 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstV1I | GCAGC | 1 cut(s) | 137 |
| BstV2I | GAAGAC | 1 cut(s) | 88 |
| BstX2I | RGATCY | 1 cut(s) | 82 |
| BstYI | RGATCY | 1 cut(s) | 82 |
| Cac8I | GCNNGC | 2 cut(s) | 29, 367 |
| CciI | TCATGA | 1 cut(s) | 425 |
| CviAII | CATG | 3 cut(s) | 274, 388, 426 |
| CviJI | RGCY | 3 cut(s) | 31, 147, 369 |
| CviKI_1 | RGCY | 3 cut(s) | 31, 147, 369 |
| DdeI | CTNAG | 1 cut(s) | 11 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| FaeI | CATG | 3 cut(s) | 277, 391, 429 |
| FaiI | YATR | 8 cut(s) | 47, 104, 142, 159, 275, 318, 389, 427 |
| FatI | CATG | 3 cut(s) | 273, 387, 425 |
| FauI | CCCGC | 1 cut(s) | 20 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspBI | CTAG | 1 cut(s) | 206 |
| GluI | GCNGC | 1 cut(s) | 126 |
| Hin1I | GRCGYC | 1 cut(s) | 240 |
| Hin1II | CATG | 3 cut(s) | 277, 391, 429 |
| HincII | GTYRAC | 1 cut(s) | 238 |
| HindII | GTYRAC | 1 cut(s) | 238 |
| HinfI | GANTC | 2 cut(s) | 4, 398 |
| Hpy166II | GTNNAC | 1 cut(s) | 238 |
| Hpy188I | TCNGA | 1 cut(s) | 327 |
| Hpy188III | TCNNGA | 4 cut(s) | 61, 80, 86, 426 |
| Hpy8I | GTNNAC | 1 cut(s) | 238 |
| HpyAV | CCTTC | 2 cut(s) | 115, 214 |
| HpyCH4IV | ACGT | 1 cut(s) | 240 |
| HpyF3I | CTNAG | 1 cut(s) | 11 |
| HpySE526I | ACGT | 1 cut(s) | 240 |
| Hsp92I | GRCGYC | 1 cut(s) | 240 |
| Hsp92II | CATG | 3 cut(s) | 277, 391, 429 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LpnPI | CCDG | 6 cut(s) | 179, 202, 281, 294, 318, 379 |
| Lsp1109I | GCAGC | 1 cut(s) | 137 |
| LweI | GCATC | 1 cut(s) | 238 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MaeII | ACGT | 1 cut(s) | 240 |
| MaeIII | GTNAC | 1 cut(s) | 359 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MboII | GAAGA | 3 cut(s) | 88, 127, 130 |
| MflI | RGATCY | 1 cut(s) | 82 |
| MluCI | AATT | 4 cut(s) | 137, 163, 226, 253 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 6 cut(s) | 66, 68, 191, 194, 280, 348 |
| MseI | TTAA | 1 cut(s) | 416 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 3 cut(s) | 277, 391, 429 |
| NlaIV | GGNNCC | 1 cut(s) | 38 |
| PagI | TCATGA | 1 cut(s) | 425 |
| PfeI | GAWTC | 1 cut(s) | 398 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PspN4I | GGNNCC | 1 cut(s) | 38 |
| PsuI | RGATCY | 1 cut(s) | 82 |
| SaqAI | TTAA | 1 cut(s) | 416 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 6 cut(s) | 174, 243, 300, 313, 359, 371 |
| SfaNI | GCATC | 1 cut(s) | 238 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| SpeI | ACTAGT | 1 cut(s) | 205 |
| Sse9I | AATT | 4 cut(s) | 137, 163, 226, 253 |
| SsiI | CCGC | 1 cut(s) | 27 |
| SspMI | CTAG | 1 cut(s) | 206 |
| TaiI | ACGT | 1 cut(s) | 243 |
| TasI | AATT | 4 cut(s) | 137, 163, 226, 253 |
| TfiI | GAWTC | 1 cut(s) | 398 |
| Tru1I | TTAA | 1 cut(s) | 416 |
| Tru9I | TTAA | 1 cut(s) | 416 |
| TseI | GCWGC | 1 cut(s) | 125 |
| TspDTI | ATGAA | 1 cut(s) | 253 |
| XspI | CTAG | 1 cut(s) | 206 |
| ZraI | GACGTC | 1 cut(s) | 241 |