Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 67 |
| AccII | CGCG | 1 cut(s) | 10 |
| AcoI | YGGCCR | 1 cut(s) | 120 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 64 |
| AjnI | CCWGG | 1 cut(s) | 70 |
| AluBI | AGCT | 1 cut(s) | 41 |
| AluI | AGCT | 1 cut(s) | 41 |
| AoxI | GGCC | 2 cut(s) | 74, 120 |
| ApeKI | GCWGC | 2 cut(s) | 12, 38 |
| AspLEI | GCGC | 1 cut(s) | 12 |
| AspS9I | GGNCC | 1 cut(s) | 74 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| BalI | TGGCCA | 1 cut(s) | 122 |
| BanI | GGYRCC | 1 cut(s) | 67 |
| BbvI | GCAGC | 2 cut(s) | 24, 50 |
| BccI | CCATC | 2 cut(s) | 67, 140 |
| BciT130I | CCWGG | 1 cut(s) | 72 |
| BclI | TGATCA | 1 cut(s) | 19 |
| BisI | GCNGC | 2 cut(s) | 13, 39 |
| BlsI | GCNGC | 2 cut(s) | 14, 40 |
| Bme1390I | CCNGG | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 1 cut(s) | 74 |
| BmiI | GGNNCC | 1 cut(s) | 69 |
| BmrFI | CCNGG | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 1 cut(s) | 71 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 17, 47 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseBI | CCWGG | 1 cut(s) | 72 |
| BseDI | CCNNGG | 1 cut(s) | 71 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BseXI | GCAGC | 2 cut(s) | 24, 50 |
| Bsh1236I | CGCG | 1 cut(s) | 10 |
| BshFI | GGCC | 2 cut(s) | 76, 122 |
| BshNI | GGYRCC | 1 cut(s) | 67 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 64 |
| BsnI | GGCC | 2 cut(s) | 76, 122 |
| Bsp143I | GATC | 1 cut(s) | 19 |
| BspANI | GGCC | 2 cut(s) | 76, 122 |
| BspFNI | CGCG | 1 cut(s) | 10 |
| BspLI | GGNNCC | 1 cut(s) | 69 |
| BspT107I | GGYRCC | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 71 |
| BssMI | GATC | 1 cut(s) | 19 |
| Bst2UI | CCWGG | 1 cut(s) | 72 |
| BstFNI | CGCG | 1 cut(s) | 10 |
| BstHHI | GCGC | 1 cut(s) | 12 |
| BstKTI | GATC | 1 cut(s) | 22 |
| BstMBI | GATC | 1 cut(s) | 19 |
| BstNI | CCWGG | 1 cut(s) | 72 |
| BstNSI | RCATGY | 1 cut(s) | 55 |
| BstSCI | CCNGG | 1 cut(s) | 70 |
| BstUI | CGCG | 1 cut(s) | 10 |
| BstV1I | GCAGC | 2 cut(s) | 24, 50 |
| BsuRI | GGCC | 2 cut(s) | 76, 122 |
| BtsI | GCAGTG | 1 cut(s) | 215 |
| BtsIMutI | CAGTG | 1 cut(s) | 215 |
| CfoI | GCGC | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 1 cut(s) | 74 |
| CseI | GACGC | 1 cut(s) | 16 |
| CviAII | CATG | 1 cut(s) | 52 |
| CviJI | RGCY | 3 cut(s) | 41, 76, 122 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 76, 122 |
| DpnI | GATC | 1 cut(s) | 21 |
| DpnII | GATC | 1 cut(s) | 19 |
| EaeI | YGGCCR | 1 cut(s) | 120 |
| EcoRII | CCWGG | 1 cut(s) | 70 |
| FaeI | CATG | 1 cut(s) | 55 |
| FaiI | YATR | 4 cut(s) | 53, 142, 231, 243 |
| FatI | CATG | 1 cut(s) | 51 |
| FbaI | TGATCA | 1 cut(s) | 19 |
| Fnu4HI | GCNGC | 2 cut(s) | 13, 39 |
| Fsp4HI | GCNGC | 2 cut(s) | 13, 39 |
| GlaI | GCGC | 1 cut(s) | 11 |
| GluI | GCNGC | 2 cut(s) | 13, 39 |
| HaeIII | GGCC | 2 cut(s) | 76, 122 |
| HgaI | GACGC | 1 cut(s) | 16 |
| HhaI | GCGC | 1 cut(s) | 12 |
| Hin1II | CATG | 1 cut(s) | 55 |
| Hin6I | GCGC | 1 cut(s) | 10 |
| HinP1I | GCGC | 1 cut(s) | 10 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 250 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 3 cut(s) | 38, 55, 241 |
| Hsp92II | CATG | 1 cut(s) | 55 |
| HspAI | GCGC | 1 cut(s) | 10 |
| Ksp22I | TGATCA | 1 cut(s) | 19 |
| Kzo9I | GATC | 1 cut(s) | 19 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 5 cut(s) | 8, 57, 84, 97, 106 |
| Lsp1109I | GCAGC | 2 cut(s) | 24, 50 |
| MalI | GATC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 19 |
| MboII | GAAGA | 1 cut(s) | 58 |
| MlsI | TGGCCA | 1 cut(s) | 122 |
| MluCI | AATT | 2 cut(s) | 124, 168 |
| MluNI | TGGCCA | 1 cut(s) | 122 |
| MnlI | CCTC | 3 cut(s) | 19, 22, 183 |
| Mox20I | TGGCCA | 1 cut(s) | 122 |
| MscI | TGGCCA | 1 cut(s) | 122 |
| Msp20I | TGGCCA | 1 cut(s) | 122 |
| MspA1I | CMGCKG | 1 cut(s) | 41 |
| MspR9I | CCNGG | 1 cut(s) | 72 |
| MvaI | CCWGG | 1 cut(s) | 72 |
| MvnI | CGCG | 1 cut(s) | 10 |
| NdeII | GATC | 1 cut(s) | 19 |
| NlaIII | CATG | 1 cut(s) | 55 |
| NlaIV | GGNNCC | 1 cut(s) | 69 |
| NspI | RCATGY | 1 cut(s) | 55 |
| PkrI | GCNGC | 2 cut(s) | 14, 40 |
| Psp6I | CCWGG | 1 cut(s) | 70 |
| PspGI | CCWGG | 1 cut(s) | 70 |
| PspN4I | GGNNCC | 1 cut(s) | 69 |
| PspPI | GGNCC | 1 cut(s) | 74 |
| PvuII | CAGCTG | 1 cut(s) | 41 |
| SatI | GCNGC | 2 cut(s) | 13, 39 |
| Sau3AI | GATC | 1 cut(s) | 19 |
| Sau96I | GGNCC | 1 cut(s) | 74 |
| ScrFI | CCNGG | 1 cut(s) | 72 |
| SetI | ASST | 3 cut(s) | 33, 43, 73 |
| SgeI | CNNG | 8 cut(s) | 21, 35, 64, 83, 84, 105, 124, 148 |
| SmlI | CTYRAG | 1 cut(s) | 250 |
| SmoI | CTYRAG | 1 cut(s) | 250 |
| Sse9I | AATT | 2 cut(s) | 124, 168 |
| StyD4I | CCNGG | 1 cut(s) | 70 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TasI | AATT | 2 cut(s) | 124, 168 |
| TscAI | CASTG | 1 cut(s) | 222 |
| TseI | GCWGC | 2 cut(s) | 12, 38 |
| TspRI | CASTG | 1 cut(s) | 222 |
| XceI | RCATGY | 1 cut(s) | 55 |