ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1076 |
| AccII | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| AclWI | GGATC | 3 cut(s) | 399, 839, 1916 |
| AcoI | YGGCCR | 1 cut(s) | 1659 |
| AcsI | RAATTY | 3 cut(s) | 185, 535, 1477 |
| AcuI | CTGAAG | 2 cut(s) | 401, 497 |
| AfaI | GTAC | 4 cut(s) | 904, 1130, 1225, 1825 |
| AfeI | AGCGCT | 1 cut(s) | 1201 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 62, 729, 1313, 1774 |
| AgsI | TTSAA | 9 cut(s) | 757, 934, 1106, 1247, 1342, 1394, 1463, 1669, 1761 |
| AjiI | CACGTC | 1 cut(s) | 1232 |
| AjnI | CCWGG | 2 cut(s) | 298, 530 |
| AluBI | AGCT | 5 cut(s) | 326, 415, 446, 983, 1366 |
| AluI | AGCT | 5 cut(s) | 326, 415, 446, 983, 1366 |
| Alw21I | GWGCWC | 3 cut(s) | 486, 889, 1114 |
| Alw26I | GTCTC | 5 cut(s) | 149, 554, 592, 1346, 1568 |
| Alw44I | GTGCAC | 1 cut(s) | 482 |
| AlwI | GGATC | 3 cut(s) | 399, 839, 1916 |
| Aor51HI | AGCGCT | 1 cut(s) | 1201 |
| AoxI | GGCC | 6 cut(s) | 67, 89, 296, 720, 1020, 1659 |
| ApaLI | GTGCAC | 1 cut(s) | 482 |
| ApeKI | GCWGC | 8 cut(s) | 412, 461, 498, 980, 983, 1363, 1447, 1450 |
| ApoI | RAATTY | 3 cut(s) | 185, 535, 1477 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 879 |
| AspLEI | GCGC | 5 cut(s) | 112, 290, 474, 476, 1202 |
| AspS9I | GGNCC | 2 cut(s) | 67, 1772 |
| AsuC2I | CCSGG | 3 cut(s) | 1024, 1627, 1770 |
| AsuHPI | GGTGA | 8 cut(s) | 388, 520, 907, 938, 1159, 1690, 1779, 1855 |
| AvaII | GGWCC | 1 cut(s) | 1772 |
| AxyI | CCTNAGG | 1 cut(s) | 810 |
| BaeGI | GKGCMC | 2 cut(s) | 486, 1261 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1120, 1153, 1815, 1848 |
| BbsI | GAAGAC | 1 cut(s) | 764 |
| Bbv12I | GWGCWC | 3 cut(s) | 486, 889, 1114 |
| BbvI | GCAGC | 8 cut(s) | 424, 448, 510, 970, 992, 1375, 1459, 1462 |
| BccI | CCATC | 6 cut(s) | 211, 347, 727, 913, 1460, 1772 |
| BceAI | ACGGC | 1 cut(s) | 474 |
| BciT130I | CCWGG | 2 cut(s) | 300, 532 |
| BciVI | GTATCC | 1 cut(s) | 1807 |
| BclI | TGATCA | 3 cut(s) | 130, 525, 1171 |
| BcnI | CCSGG | 3 cut(s) | 1024, 1627, 1770 |
| BcoDI | GTCTC | 5 cut(s) | 149, 554, 592, 1346, 1568 |
| BfaI | CTAG | 5 cut(s) | 629, 800, 828, 890, 1140 |
| BfmI | CTRYAG | 2 cut(s) | 835, 1538 |
| BfoI | RGCGCY | 2 cut(s) | 291, 1203 |
| BfuI | GTATCC | 1 cut(s) | 1807 |
| BisI | GCNGC | 9 cut(s) | 264, 413, 462, 499, 981, 984, 1364, 1448, 1451 |
| BlpI | GCTNAGC | 1 cut(s) | 1203 |
| BlsI | GCNGC | 9 cut(s) | 265, 414, 463, 500, 982, 985, 1365, 1449, 1452 |
| Bme1390I | CCNGG | 5 cut(s) | 300, 532, 1024, 1627, 1770 |
| Bme18I | GGWCC | 1 cut(s) | 1772 |
| BmgBI | CACGTC | 1 cut(s) | 1232 |
| BmgT120I | GGNCC | 2 cut(s) | 67, 1772 |
| BmiI | GGNNCC | 2 cut(s) | 68, 1319 |
| BmrFI | CCNGG | 5 cut(s) | 300, 532, 1024, 1627, 1770 |
| BmrI | ACTGGG | 1 cut(s) | 1365 |
| BmsI | GCATC | 7 cut(s) | 238, 250, 498, 772, 1511, 1536, 1740 |
| BmuI | ACTGGG | 1 cut(s) | 1365 |
| BpiI | GAAGAC | 1 cut(s) | 764 |
| BpmI | CTGGAG | 2 cut(s) | 421, 984 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1203 |
| BpuEI | CTTGAG | 2 cut(s) | 59, 1616 |
| BpuMI | CCSGG | 3 cut(s) | 1024, 1627, 1770 |
| BsaBI | GATNNNNATC | 1 cut(s) | 307 |
| BsaI | GGTCTC | 2 cut(s) | 149, 592 |
| BsaJI | CCNNGG | 4 cut(s) | 911, 1080, 1626, 1768 |
| BsaWI | WCCGGW | 3 cut(s) | 745, 1570, 1774 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 961, 991, 1141, 1171 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 62, 729, 1313, 1774 |
| Bse118I | RCCGGY | 2 cut(s) | 390, 1661 |
| Bse1I | ACTGG | 1 cut(s) | 1360 |
| Bse21I | CCTNAGG | 1 cut(s) | 810 |
| Bse3DI | GCAATG | 2 cut(s) | 283, 684 |
| Bse8I | GATNNNNATC | 1 cut(s) | 307 |
| BseBI | CCWGG | 2 cut(s) | 300, 532 |
| BseDI | CCNNGG | 4 cut(s) | 911, 1080, 1626, 1768 |
| BseGI | GGATG | 7 cut(s) | 253, 391, 738, 958, 1441, 1639, 1783 |
| BseJI | GATNNNNATC | 1 cut(s) | 307 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 62, 729, 1313, 1774 |
| BseMI | GCAATG | 2 cut(s) | 283, 684 |
| BseMII | CTCAG | 2 cut(s) | 801, 1194 |
| BseNI | ACTGG | 1 cut(s) | 1360 |
| BsePI | GCGCGC | 1 cut(s) | 472 |
| BseRI | GAGGAG | 4 cut(s) | 110, 1622, 1652, 1739 |
| BseSI | GKGCMC | 2 cut(s) | 486, 1261 |
| BseXI | GCAGC | 8 cut(s) | 424, 448, 510, 970, 992, 1375, 1459, 1462 |
| BseYI | CCCAGC | 1 cut(s) | 326 |
| BsgI | GTGCAG | 2 cut(s) | 969, 999 |
| Bsh1236I | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| BshFI | GGCC | 6 cut(s) | 69, 91, 298, 722, 1022, 1661 |
| BsiHKAI | GWGCWC | 3 cut(s) | 486, 889, 1114 |
| BsiSI | CCGG | 8 cut(s) | 391, 746, 1023, 1571, 1626, 1662, 1770, 1775 |
| BslFI | GGGAC | 1 cut(s) | 1548 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 62, 729, 1313, 1774 |
| BsmAI | GTCTC | 5 cut(s) | 149, 554, 592, 1346, 1568 |
| BsmFI | GGGAC | 1 cut(s) | 1548 |
| BsnI | GGCC | 6 cut(s) | 69, 91, 298, 722, 1022, 1661 |
| Bso31I | GGTCTC | 2 cut(s) | 149, 592 |
| Bsp1286I | GDGCHC | 4 cut(s) | 486, 889, 1114, 1261 |
| Bsp143I | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1203 |
| BspANI | GGCC | 6 cut(s) | 69, 91, 298, 722, 1022, 1661 |
| BspCNI | CTCAG | 2 cut(s) | 802, 1195 |
| BspFNI | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| BspHI | TCATGA | 1 cut(s) | 133 |
| BspLI | GGNNCC | 2 cut(s) | 68, 1319 |
| BspMAI | CTGCAG | 1 cut(s) | 1542 |
| BspPI | GGATC | 3 cut(s) | 399, 839, 1916 |
| BspTNI | GGTCTC | 2 cut(s) | 149, 592 |
| BsrDI | GCAATG | 2 cut(s) | 283, 684 |
| BsrFI | RCCGGY | 2 cut(s) | 390, 1661 |
| BsrI | ACTGG | 1 cut(s) | 1360 |
| BssAI | RCCGGY | 2 cut(s) | 390, 1661 |
| BssECI | CCNNGG | 4 cut(s) | 911, 1080, 1626, 1768 |
| BssHII | GCGCGC | 1 cut(s) | 472 |
| BssMI | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| BssNAI | GTATAC | 1 cut(s) | 1077 |
| BssT1I | CCWWGG | 2 cut(s) | 911, 1080 |
| Bst1107I | GTATAC | 1 cut(s) | 1077 |
| Bst2UI | CCWGG | 2 cut(s) | 300, 532 |
| Bst4CI | ACNGT | 6 cut(s) | 227, 382, 481, 839, 902, 1819 |
| Bst6I | CTCTTC | 1 cut(s) | 1242 |
| BstC8I | GCNNGC | 3 cut(s) | 93, 474, 978 |
| BstDEI | CTNAG | 4 cut(s) | 810, 1203, 1302, 1926 |
| BstEII | GGTNACC | 1 cut(s) | 1678 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1311 |
| BstF5I | GGATG | 7 cut(s) | 253, 391, 738, 958, 1441, 1639, 1783 |
| BstFNI | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| BstH2I | RGCGCY | 2 cut(s) | 291, 1203 |
| BstHHI | GCGC | 5 cut(s) | 112, 290, 474, 476, 1202 |
| BstKTI | GATC | 9 cut(s) | 133, 407, 519, 528, 583, 834, 1174, 1731, 1924 |
| BstMAI | GTCTC | 5 cut(s) | 149, 554, 592, 1346, 1568 |
| BstMBI | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 52, 107, 263, 418, 495 |
| BstNI | CCWGG | 2 cut(s) | 300, 532 |
| BstNSI | RCATGY | 2 cut(s) | 1400, 1786 |
| BstPI | GGTNACC | 1 cut(s) | 1678 |
| BstSCI | CCNGG | 5 cut(s) | 298, 530, 1022, 1625, 1768 |
| BstSFI | CTRYAG | 2 cut(s) | 835, 1538 |
| BstSLI | GKGCMC | 2 cut(s) | 486, 1261 |
| BstUI | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| BstV1I | GCAGC | 8 cut(s) | 424, 448, 510, 970, 992, 1375, 1459, 1462 |
| BstV2I | GAAGAC | 1 cut(s) | 764 |
| BstX2I | RGATCY | 3 cut(s) | 404, 831, 1921 |
| BstYI | RGATCY | 3 cut(s) | 404, 831, 1921 |
| BstZ17I | GTATAC | 1 cut(s) | 1077 |
| Bsu36I | CCTNAGG | 1 cut(s) | 810 |
| BsuI | GTATCC | 1 cut(s) | 1807 |
| BsuRI | GGCC | 6 cut(s) | 69, 91, 298, 722, 1022, 1661 |
| BtrI | CACGTC | 1 cut(s) | 1232 |
| BtsCI | GGATG | 7 cut(s) | 253, 391, 738, 958, 1441, 1639, 1783 |
| BtsIMutI | CAGTG | 2 cut(s) | 147, 477 |
| Cac8I | GCNNGC | 3 cut(s) | 93, 474, 978 |
| CciI | TCATGA | 1 cut(s) | 133 |
| CfoI | GCGC | 5 cut(s) | 112, 290, 474, 476, 1202 |
| Cfr10I | RCCGGY | 2 cut(s) | 390, 1661 |
| Cfr13I | GGNCC | 2 cut(s) | 67, 1772 |
| CpoI | CGGWCCG | 1 cut(s) | 1772 |
| CseI | GACGC | 1 cut(s) | 446 |
| Csp6I | GTAC | 4 cut(s) | 903, 1129, 1224, 1824 |
| CspI | CGGWCCG | 1 cut(s) | 1772 |
| CviAII | CATG | 6 cut(s) | 96, 134, 590, 1397, 1783, 1895 |
| CviQI | GTAC | 4 cut(s) | 903, 1129, 1224, 1824 |
| DdeI | CTNAG | 4 cut(s) | 810, 1203, 1302, 1926 |
| DpnI | GATC | 9 cut(s) | 132, 406, 518, 527, 582, 833, 1173, 1730, 1923 |
| DpnII | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| EaeI | YGGCCR | 1 cut(s) | 1659 |
| Eam1104I | CTCTTC | 1 cut(s) | 1242 |
| EarI | CTCTTC | 1 cut(s) | 1242 |
| Eco130I | CCWWGG | 2 cut(s) | 911, 1080 |
| Eco147I | AGGCCT | 1 cut(s) | 91 |
| Eco31I | GGTCTC | 2 cut(s) | 149, 592 |
| Eco47I | GGWCC | 1 cut(s) | 1772 |
| Eco47III | AGCGCT | 1 cut(s) | 1201 |
| Eco57I | CTGAAG | 2 cut(s) | 401, 497 |
| Eco81I | CCTNAGG | 1 cut(s) | 810 |
| Eco91I | GGTNACC | 1 cut(s) | 1678 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1311 |
| EcoO109I | RGGNCCY | 1 cut(s) | 67 |
| EcoO65I | GGTNACC | 1 cut(s) | 1678 |
| EcoRI | GAATTC | 1 cut(s) | 1477 |
| EcoRII | CCWGG | 2 cut(s) | 298, 530 |
| EcoT14I | CCWWGG | 2 cut(s) | 911, 1080 |
| ErhI | CCWWGG | 2 cut(s) | 911, 1080 |
| FaeI | CATG | 6 cut(s) | 99, 137, 593, 1400, 1786, 1898 |
| FaqI | GGGAC | 1 cut(s) | 1548 |
| FatI | CATG | 6 cut(s) | 95, 133, 589, 1396, 1782, 1894 |
| FbaI | TGATCA | 3 cut(s) | 130, 525, 1171 |
| FblI | GTMKAC | 1 cut(s) | 1076 |
| Fnu4HI | GCNGC | 9 cut(s) | 264, 413, 462, 499, 981, 984, 1364, 1448, 1451 |
| FokI | GGATG | 7 cut(s) | 260, 398, 745, 965, 1448, 1646, 1790 |
| Fsp4HI | GCNGC | 9 cut(s) | 264, 413, 462, 499, 981, 984, 1364, 1448, 1451 |
| FspBI | CTAG | 5 cut(s) | 629, 800, 828, 890, 1140 |
| GlaI | GCGC | 5 cut(s) | 111, 289, 473, 475, 1201 |
| GluI | GCNGC | 9 cut(s) | 264, 413, 462, 499, 981, 984, 1364, 1448, 1451 |
| GsaI | CCCAGC | 1 cut(s) | 330 |
| GsuI | CTGGAG | 2 cut(s) | 421, 984 |
| HaeII | RGCGCY | 2 cut(s) | 291, 1203 |
| HaeIII | GGCC | 6 cut(s) | 69, 91, 298, 722, 1022, 1661 |
| HapII | CCGG | 8 cut(s) | 391, 746, 1023, 1571, 1626, 1662, 1770, 1775 |
| HgaI | GACGC | 1 cut(s) | 446 |
| HhaI | GCGC | 5 cut(s) | 112, 290, 474, 476, 1202 |
| Hin1II | CATG | 6 cut(s) | 99, 137, 593, 1400, 1786, 1898 |
| Hin6I | GCGC | 5 cut(s) | 110, 288, 472, 474, 1200 |
| HinP1I | GCGC | 5 cut(s) | 110, 288, 472, 474, 1200 |
| HincII | GTYRAC | 1 cut(s) | 337 |
| HindII | GTYRAC | 1 cut(s) | 337 |
| HpaII | CCGG | 8 cut(s) | 391, 746, 1023, 1571, 1626, 1662, 1770, 1775 |
| HphI | GGTGA | 8 cut(s) | 388, 520, 907, 938, 1159, 1690, 1779, 1855 |
| Hpy166II | GTNNAC | 7 cut(s) | 337, 484, 553, 898, 905, 1077, 1226 |
| Hpy188I | TCNGA | 6 cut(s) | 409, 516, 622, 1004, 1171, 1720 |
| Hpy188III | TCNNGA | 9 cut(s) | 128, 134, 400, 963, 1268, 1424, 1649, 1732, 1747 |
| Hpy8I | GTNNAC | 7 cut(s) | 337, 484, 553, 898, 905, 1077, 1226 |
| Hpy99I | CGWCG | 2 cut(s) | 440, 1224 |
| HpyAV | CCTTC | 4 cut(s) | 1317, 1491, 1544, 1767 |
| HpyCH4III | ACNGT | 6 cut(s) | 227, 382, 481, 839, 902, 1819 |
| HpyCH4IV | ACGT | 5 cut(s) | 450, 869, 998, 1222, 1231 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 52, 107, 263, 418, 495 |
| HpyF3I | CTNAG | 4 cut(s) | 810, 1203, 1302, 1926 |
| HpySE526I | ACGT | 5 cut(s) | 450, 869, 998, 1222, 1231 |
| Hsp92II | CATG | 6 cut(s) | 99, 137, 593, 1400, 1786, 1898 |
| HspAI | GCGC | 5 cut(s) | 110, 288, 472, 474, 1200 |
| Ksp22I | TGATCA | 3 cut(s) | 130, 525, 1171 |
| Kzo9I | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| LmnI | GCTCC | 1 cut(s) | 1084 |
| Lsp1109I | GCAGC | 8 cut(s) | 424, 448, 510, 970, 992, 1375, 1459, 1462 |
| LweI | GCATC | 7 cut(s) | 238, 250, 498, 772, 1511, 1536, 1740 |
| MaeI | CTAG | 5 cut(s) | 629, 800, 828, 890, 1140 |
| MaeII | ACGT | 5 cut(s) | 450, 869, 998, 1222, 1231 |
| MaeIII | GTNAC | 4 cut(s) | 376, 1147, 1678, 1785 |
| MalI | GATC | 9 cut(s) | 132, 406, 518, 527, 582, 833, 1173, 1730, 1923 |
| MboI | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| MboII | GAAGA | 8 cut(s) | 14, 72, 716, 769, 1259, 1475, 1701, 1789 |
| MflI | RGATCY | 3 cut(s) | 404, 831, 1921 |
| MhlI | GDGCHC | 4 cut(s) | 486, 889, 1114, 1261 |
| MluCI | AATT | 7 cut(s) | 185, 535, 1344, 1477, 1578, 1669, 1885 |
| MlyI | GAGTC | 5 cut(s) | 556, 613, 659, 1175, 1889 |
| MmeI | TCCRAC | 1 cut(s) | 627 |
| MroXI | GAANNNNTTC | 1 cut(s) | 879 |
| MseI | TTAA | 3 cut(s) | 372, 1325, 1581 |
| MslI | CAYNNNNRTG | 3 cut(s) | 344, 780, 1105 |
| MspA1I | CMGCKG | 2 cut(s) | 859, 983 |
| MspI | CCGG | 8 cut(s) | 391, 746, 1023, 1571, 1626, 1662, 1770, 1775 |
| MspR9I | CCNGG | 5 cut(s) | 300, 532, 1024, 1627, 1770 |
| MvaI | CCWGG | 2 cut(s) | 300, 532 |
| MvnI | CGCG | 4 cut(s) | 112, 440, 474, 976 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 52, 107, 263, 418, 495 |
| NciI | CCSGG | 3 cut(s) | 1024, 1627, 1770 |
| NdeII | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| NlaIII | CATG | 6 cut(s) | 99, 137, 593, 1400, 1786, 1898 |
| NlaIV | GGNNCC | 2 cut(s) | 68, 1319 |
| NmeAIII | GCCGAG | 1 cut(s) | 247 |
| NmuCI | GTSAC | 4 cut(s) | 376, 1147, 1678, 1785 |
| NspI | RCATGY | 2 cut(s) | 1400, 1786 |
| PagI | TCATGA | 1 cut(s) | 133 |
| PauI | GCGCGC | 1 cut(s) | 472 |
| PceI | AGGCCT | 1 cut(s) | 91 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1228 |
| PdmI | GAANNNNTTC | 1 cut(s) | 879 |
| PfeI | GAWTC | 6 cut(s) | 308, 707, 880, 1216, 1420, 1906 |
| PflFI | GACNNNGTC | 1 cut(s) | 603 |
| PkrI | GCNGC | 9 cut(s) | 265, 414, 463, 500, 982, 985, 1365, 1449, 1452 |
| PleI | GAGTC | 5 cut(s) | 556, 612, 658, 1174, 1888 |
| PpsI | GAGTC | 5 cut(s) | 556, 612, 658, 1174, 1888 |
| Psp6I | CCWGG | 2 cut(s) | 298, 530 |
| PspEI | GGTNACC | 1 cut(s) | 1678 |
| PspFI | CCCAGC | 1 cut(s) | 326 |
| PspGI | CCWGG | 2 cut(s) | 298, 530 |
| PspN4I | GGNNCC | 2 cut(s) | 68, 1319 |
| PspPI | GGNCC | 2 cut(s) | 67, 1772 |
| PstI | CTGCAG | 1 cut(s) | 1542 |
| PsuI | RGATCY | 3 cut(s) | 404, 831, 1921 |
| PsyI | GACNNNGTC | 1 cut(s) | 603 |
| PteI | GCGCGC | 1 cut(s) | 472 |
| PvuII | CAGCTG | 1 cut(s) | 983 |
| RsaI | GTAC | 4 cut(s) | 904, 1130, 1225, 1825 |
| RsaNI | GTAC | 4 cut(s) | 903, 1129, 1224, 1824 |
| RseI | CAYNNNNRTG | 3 cut(s) | 344, 780, 1105 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1772 |
| RsrII | CGGWCCG | 1 cut(s) | 1772 |
| SaqAI | TTAA | 3 cut(s) | 372, 1325, 1581 |
| SatI | GCNGC | 9 cut(s) | 264, 413, 462, 499, 981, 984, 1364, 1448, 1451 |
| Sau3AI | GATC | 9 cut(s) | 130, 404, 516, 525, 580, 831, 1171, 1728, 1921 |
| Sau96I | GGNCC | 2 cut(s) | 67, 1772 |
| SchI | GAGTC | 5 cut(s) | 556, 613, 659, 1175, 1889 |
| ScrFI | CCNGG | 5 cut(s) | 300, 532, 1024, 1627, 1770 |
| SduI | GDGCHC | 4 cut(s) | 486, 889, 1114, 1261 |
| SfaNI | GCATC | 7 cut(s) | 238, 250, 498, 772, 1511, 1536, 1740 |
| SfcI | CTRYAG | 2 cut(s) | 835, 1538 |
| SinI | GGWCC | 1 cut(s) | 1772 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 344, 780, 1105 |
| SmlI | CTYRAG | 2 cut(s) | 38, 1595 |
| SmoI | CTYRAG | 2 cut(s) | 38, 1595 |
| Sse9I | AATT | 7 cut(s) | 185, 535, 1344, 1477, 1578, 1669, 1885 |
| SseBI | AGGCCT | 1 cut(s) | 91 |
| SspI | AATATT | 1 cut(s) | 1808 |
| SspMI | CTAG | 5 cut(s) | 629, 800, 828, 890, 1140 |
| StuI | AGGCCT | 1 cut(s) | 91 |
| StyD4I | CCNGG | 5 cut(s) | 298, 530, 1022, 1625, 1768 |
| StyI | CCWWGG | 2 cut(s) | 911, 1080 |
| TaaI | ACNGT | 6 cut(s) | 227, 382, 481, 839, 902, 1819 |
| TaiI | ACGT | 5 cut(s) | 453, 872, 1001, 1225, 1234 |
| TaqI | TCGA | 6 cut(s) | 579, 664, 883, 1219, 1310, 1685 |
| TaqII | GACCGA | 2 cut(s) | 73, 616 |
| TasI | AATT | 7 cut(s) | 185, 535, 1344, 1477, 1578, 1669, 1885 |
| TatI | WGTACW | 1 cut(s) | 902 |
| TauI | GCSGC | 1 cut(s) | 266 |
| TfiI | GAWTC | 6 cut(s) | 308, 707, 880, 1216, 1420, 1906 |
| Tru1I | TTAA | 3 cut(s) | 372, 1325, 1581 |
| Tru9I | TTAA | 3 cut(s) | 372, 1325, 1581 |
| TscAI | CASTG | 2 cut(s) | 154, 484 |
| TseFI | GTSAC | 4 cut(s) | 376, 1147, 1678, 1785 |
| TseI | GCWGC | 8 cut(s) | 412, 461, 498, 980, 983, 1363, 1447, 1450 |
| Tsp45I | GTSAC | 4 cut(s) | 376, 1147, 1678, 1785 |
| TspDTI | ATGAA | 9 cut(s) | 150, 167, 578, 647, 740, 1452, 1481, 1563, 1706 |
| TspRI | CASTG | 2 cut(s) | 154, 484 |
| Tth111I | GACNNNGTC | 1 cut(s) | 603 |
| VneI | GTGCAC | 1 cut(s) | 482 |
| VpaK11BI | GGWCC | 1 cut(s) | 1772 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1311 |
| XapI | RAATTY | 3 cut(s) | 185, 535, 1477 |
| XceI | RCATGY | 2 cut(s) | 1400, 1786 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1087 |
| XmiI | GTMKAC | 1 cut(s) | 1076 |
| XmnI | GAANNNNTTC | 1 cut(s) | 879 |
| XspI | CTAG | 5 cut(s) | 629, 800, 828, 890, 1140 |