ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 156 |
| AciI | CCGC | 1 cut(s) | 247 |
| AfaI | GTAC | 2 cut(s) | 18, 81 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 100, 132, 193 |
| AgsI | TTSAA | 3 cut(s) | 13, 158, 238 |
| AhlI | ACTAGT | 1 cut(s) | 40 |
| AjnI | CCWGG | 1 cut(s) | 23 |
| Alw26I | GTCTC | 2 cut(s) | 76, 115 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| AspS9I | GGNCC | 2 cut(s) | 128, 145 |
| AsuHPI | GGTGA | 1 cut(s) | 13 |
| AvaII | GGWCC | 2 cut(s) | 128, 145 |
| BbsI | GAAGAC | 1 cut(s) | 219 |
| BccI | CCATC | 2 cut(s) | 133, 191 |
| BciT130I | CCWGG | 1 cut(s) | 25 |
| BcoDI | GTCTC | 2 cut(s) | 76, 115 |
| BcuI | ACTAGT | 1 cut(s) | 40 |
| BfaI | CTAG | 2 cut(s) | 41, 96 |
| BfuAI | ACCTGC | 1 cut(s) | 156 |
| BisI | GCNGC | 2 cut(s) | 5, 247 |
| BlsI | GCNGC | 2 cut(s) | 6, 248 |
| Bme1390I | CCNGG | 1 cut(s) | 25 |
| Bme18I | GGWCC | 2 cut(s) | 128, 145 |
| BmgT120I | GGNCC | 2 cut(s) | 128, 145 |
| BmrFI | CCNGG | 1 cut(s) | 25 |
| BpiI | GAAGAC | 1 cut(s) | 219 |
| BpuEI | CTTGAG | 1 cut(s) | 187 |
| BsaI | GGTCTC | 1 cut(s) | 76 |
| BsaJI | CCNNGG | 2 cut(s) | 66, 131 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 100, 132, 193 |
| BseBI | CCWGG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 2 cut(s) | 66, 131 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 100, 132, 193 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BsiSI | CCGG | 1 cut(s) | 126 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 100, 132, 193 |
| BsmAI | GTCTC | 2 cut(s) | 76, 115 |
| Bso31I | GGTCTC | 1 cut(s) | 76 |
| BspACI | CCGC | 1 cut(s) | 247 |
| BspCNI | CTCAG | 1 cut(s) | 125 |
| BspMI | ACCTGC | 1 cut(s) | 156 |
| BspTNI | GGTCTC | 1 cut(s) | 76 |
| BssECI | CCNNGG | 2 cut(s) | 66, 131 |
| BssT1I | CCWWGG | 2 cut(s) | 66, 131 |
| Bst2UI | CCWGG | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 1 cut(s) | 32 |
| BstDEI | CTNAG | 1 cut(s) | 112 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstMAI | GTCTC | 2 cut(s) | 76, 115 |
| BstNI | CCWGG | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 23 |
| BstV2I | GAAGAC | 1 cut(s) | 219 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| BveI | ACCTGC | 1 cut(s) | 156 |
| Cfr13I | GGNCC | 2 cut(s) | 128, 145 |
| Csp6I | GTAC | 2 cut(s) | 17, 80 |
| CviAII | CATG | 1 cut(s) | 86 |
| CviJI | RGCY | 4 cut(s) | 136, 165, 201, 215 |
| CviKI_1 | RGCY | 4 cut(s) | 136, 165, 201, 215 |
| CviQI | GTAC | 2 cut(s) | 17, 80 |
| DdeI | CTNAG | 1 cut(s) | 112 |
| Eco130I | CCWWGG | 2 cut(s) | 66, 131 |
| Eco31I | GGTCTC | 1 cut(s) | 76 |
| Eco47I | GGWCC | 2 cut(s) | 128, 145 |
| EcoO109I | RGGNCCY | 1 cut(s) | 145 |
| EcoRII | CCWGG | 1 cut(s) | 23 |
| EcoT14I | CCWWGG | 2 cut(s) | 66, 131 |
| ErhI | CCWWGG | 2 cut(s) | 66, 131 |
| FaeI | CATG | 1 cut(s) | 89 |
| FaiI | YATR | 1 cut(s) | 87 |
| FatI | CATG | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 247 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 247 |
| FspBI | CTAG | 2 cut(s) | 41, 96 |
| GluI | GCNGC | 2 cut(s) | 5, 247 |
| HapII | CCGG | 1 cut(s) | 126 |
| Hin1II | CATG | 1 cut(s) | 89 |
| HincII | GTYRAC | 2 cut(s) | 46, 91 |
| HindII | GTYRAC | 2 cut(s) | 46, 91 |
| HpaI | GTTAAC | 1 cut(s) | 46 |
| HpaII | CCGG | 1 cut(s) | 126 |
| HphI | GGTGA | 1 cut(s) | 13 |
| Hpy166II | GTNNAC | 2 cut(s) | 46, 91 |
| Hpy188I | TCNGA | 2 cut(s) | 115, 232 |
| Hpy188III | TCNNGA | 1 cut(s) | 204 |
| Hpy8I | GTNNAC | 2 cut(s) | 46, 91 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 1 cut(s) | 32 |
| HpyCH4IV | ACGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 1 cut(s) | 177 |
| HpyF3I | CTNAG | 1 cut(s) | 112 |
| HpySE526I | ACGT | 1 cut(s) | 82 |
| Hsp92II | CATG | 1 cut(s) | 89 |
| KspAI | GTTAAC | 1 cut(s) | 46 |
| LpnPI | CCDG | 8 cut(s) | 10, 37, 62, 86, 139, 156, 161, 208 |
| MaeI | CTAG | 2 cut(s) | 41, 96 |
| MaeII | ACGT | 1 cut(s) | 82 |
| MboII | GAAGA | 1 cut(s) | 219 |
| MluCI | AATT | 1 cut(s) | 233 |
| MnlI | CCTC | 3 cut(s) | 29, 136, 200 |
| MseI | TTAA | 2 cut(s) | 45, 256 |
| MspI | CCGG | 1 cut(s) | 126 |
| MspR9I | CCNGG | 1 cut(s) | 25 |
| MvaI | CCWGG | 1 cut(s) | 25 |
| NlaIII | CATG | 1 cut(s) | 89 |
| PkrI | GCNGC | 2 cut(s) | 6, 248 |
| PpuMI | RGGWCCY | 1 cut(s) | 145 |
| Psp5II | RGGWCCY | 1 cut(s) | 145 |
| Psp6I | CCWGG | 1 cut(s) | 23 |
| PspGI | CCWGG | 1 cut(s) | 23 |
| PspPI | GGNCC | 2 cut(s) | 128, 145 |
| PspPPI | RGGWCCY | 1 cut(s) | 145 |
| RsaI | GTAC | 2 cut(s) | 18, 81 |
| RsaNI | GTAC | 2 cut(s) | 17, 80 |
| SaqAI | TTAA | 2 cut(s) | 45, 256 |
| SatI | GCNGC | 2 cut(s) | 5, 247 |
| Sau96I | GGNCC | 2 cut(s) | 128, 145 |
| ScrFI | CCNGG | 1 cut(s) | 25 |
| SetI | ASST | 6 cut(s) | 18, 26, 85, 150, 211, 243 |
| SinI | GGWCC | 2 cut(s) | 128, 145 |
| SmlI | CTYRAG | 1 cut(s) | 202 |
| SmoI | CTYRAG | 1 cut(s) | 202 |
| SpeI | ACTAGT | 1 cut(s) | 40 |
| Sse9I | AATT | 1 cut(s) | 233 |
| SsiI | CCGC | 1 cut(s) | 247 |
| SspMI | CTAG | 2 cut(s) | 41, 96 |
| StyD4I | CCNGG | 1 cut(s) | 23 |
| StyI | CCWWGG | 2 cut(s) | 66, 131 |
| TaaI | ACNGT | 1 cut(s) | 32 |
| TaiI | ACGT | 1 cut(s) | 85 |
| TaqI | TCGA | 1 cut(s) | 34 |
| TasI | AATT | 1 cut(s) | 233 |
| TauI | GCSGC | 1 cut(s) | 249 |
| Tru1I | TTAA | 2 cut(s) | 45, 256 |
| Tru9I | TTAA | 2 cut(s) | 45, 256 |
| TseI | GCWGC | 1 cut(s) | 4 |
| VpaK11BI | GGWCC | 2 cut(s) | 128, 145 |
| XspI | CTAG | 2 cut(s) | 41, 96 |