Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 520 |
| AciI | CCGC | 1 cut(s) | 518 |
| AclWI | GGATC | 1 cut(s) | 134 |
| AcsI | RAATTY | 1 cut(s) | 847 |
| AdeI | CACNNNGTG | 1 cut(s) | 365 |
| AfaI | GTAC | 2 cut(s) | 283, 789 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 482, 784, 851 |
| AgsI | TTSAA | 7 cut(s) | 239, 389, 656, 662, 671, 679, 694 |
| AjnI | CCWGG | 1 cut(s) | 739 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 495, 527 |
| AluBI | AGCT | 3 cut(s) | 165, 828, 908 |
| AluI | AGCT | 3 cut(s) | 165, 828, 908 |
| Alw26I | GTCTC | 2 cut(s) | 268, 610 |
| AlwI | GGATC | 1 cut(s) | 134 |
| Ama87I | CYCGRG | 1 cut(s) | 718 |
| AoxI | GGCC | 2 cut(s) | 198, 794 |
| ApeKI | GCWGC | 2 cut(s) | 337, 442 |
| ApoI | RAATTY | 1 cut(s) | 847 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 817, 849 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 384, 666 |
| AspLEI | GCGC | 4 cut(s) | 447, 581, 762, 927 |
| AspS9I | GGNCC | 2 cut(s) | 795, 833 |
| AsuC2I | CCSGG | 1 cut(s) | 779 |
| AsuHPI | GGTGA | 2 cut(s) | 196, 348 |
| AsuII | TTCGAA | 1 cut(s) | 217 |
| AvaI | CYCGRG | 1 cut(s) | 718 |
| AvaII | GGWCC | 1 cut(s) | 833 |
| AxyI | CCTNAGG | 1 cut(s) | 525 |
| BbsI | GAAGAC | 1 cut(s) | 879 |
| BbvI | GCAGC | 2 cut(s) | 324, 454 |
| BccI | CCATC | 2 cut(s) | 472, 811 |
| BciT130I | CCWGG | 1 cut(s) | 741 |
| BcnI | CCSGG | 1 cut(s) | 779 |
| BcoDI | GTCTC | 2 cut(s) | 268, 610 |
| BfaI | CTAG | 3 cut(s) | 546, 903, 928 |
| BfmI | CTRYAG | 1 cut(s) | 338 |
| BisI | GCNGC | 2 cut(s) | 338, 443 |
| BlsI | GCNGC | 2 cut(s) | 339, 444 |
| BmcAI | AGTACT | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 2 cut(s) | 741, 779 |
| Bme18I | GGWCC | 1 cut(s) | 833 |
| BmeT110I | CYCGRG | 1 cut(s) | 718 |
| BmgT120I | GGNCC | 2 cut(s) | 795, 833 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 2 cut(s) | 741, 779 |
| BmsI | GCATC | 2 cut(s) | 41, 923 |
| BpiI | GAAGAC | 1 cut(s) | 879 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 20, 52 |
| BpmI | CTGGAG | 1 cut(s) | 552 |
| Bpu10I | CCTNAGC | 2 cut(s) | 455, 644 |
| Bpu14I | TTCGAA | 1 cut(s) | 217 |
| BpuEI | CTTGAG | 1 cut(s) | 22 |
| BpuMI | CCSGG | 1 cut(s) | 779 |
| BsaJI | CCNNGG | 1 cut(s) | 210 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 243, 273, 394, 424 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 482, 784, 851 |
| Bse1I | ACTGG | 1 cut(s) | 569 |
| Bse21I | CCTNAGG | 1 cut(s) | 525 |
| Bse3DI | GCAATG | 2 cut(s) | 467, 769 |
| BseBI | CCWGG | 1 cut(s) | 741 |
| BseDI | CCNNGG | 1 cut(s) | 210 |
| BseGI | GGATG | 3 cut(s) | 32, 126, 822 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 482, 784, 851 |
| BseMI | GCAATG | 2 cut(s) | 467, 769 |
| BseMII | CTCAG | 1 cut(s) | 207 |
| BseNI | ACTGG | 1 cut(s) | 569 |
| BseRI | GAGGAG | 3 cut(s) | 264, 415, 506 |
| BseXI | GCAGC | 2 cut(s) | 324, 454 |
| BsgI | GTGCAG | 1 cut(s) | 461 |
| Bsh1236I | CGCG | 1 cut(s) | 520 |
| BshFI | GGCC | 2 cut(s) | 200, 796 |
| BsiHKCI | CYCGRG | 1 cut(s) | 718 |
| BsiSI | CCGG | 1 cut(s) | 779 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 482, 784, 851 |
| BsmAI | GTCTC | 2 cut(s) | 268, 610 |
| BsmBI | CGTCTC | 1 cut(s) | 610 |
| BsmI | GAATGC | 1 cut(s) | 549 |
| BsnI | GGCC | 2 cut(s) | 200, 796 |
| BsoBI | CYCGRG | 1 cut(s) | 718 |
| Bsp119I | TTCGAA | 1 cut(s) | 217 |
| Bsp143I | GATC | 2 cut(s) | 67, 139 |
| BspACI | CCGC | 1 cut(s) | 518 |
| BspANI | GGCC | 2 cut(s) | 200, 796 |
| BspCNI | CTCAG | 1 cut(s) | 206 |
| BspFNI | CGCG | 1 cut(s) | 520 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspMAI | CTGCAG | 1 cut(s) | 342 |
| BspPI | GGATC | 1 cut(s) | 134 |
| BspT104I | TTCGAA | 1 cut(s) | 217 |
| BsrDI | GCAATG | 2 cut(s) | 467, 769 |
| BsrI | ACTGG | 1 cut(s) | 569 |
| BssECI | CCNNGG | 1 cut(s) | 210 |
| BssMI | GATC | 2 cut(s) | 67, 139 |
| BssT1I | CCWWGG | 1 cut(s) | 210 |
| Bst2UI | CCWGG | 1 cut(s) | 741 |
| Bst4CI | ACNGT | 3 cut(s) | 225, 477, 509 |
| Bst6I | CTCTTC | 2 cut(s) | 72, 287 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 439 |
| BstBI | TTCGAA | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 1 cut(s) | 267 |
| BstDEI | CTNAG | 4 cut(s) | 193, 455, 525, 644 |
| BstF5I | GGATG | 3 cut(s) | 32, 126, 822 |
| BstFNI | CGCG | 1 cut(s) | 520 |
| BstHHI | GCGC | 4 cut(s) | 447, 581, 762, 927 |
| BstKTI | GATC | 2 cut(s) | 70, 142 |
| BstMAI | GTCTC | 2 cut(s) | 268, 610 |
| BstMBI | GATC | 2 cut(s) | 67, 139 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 439, 451 |
| BstNI | CCWGG | 1 cut(s) | 741 |
| BstSCI | CCNGG | 2 cut(s) | 739, 777 |
| BstSFI | CTRYAG | 1 cut(s) | 338 |
| BstUI | CGCG | 1 cut(s) | 520 |
| BstV1I | GCAGC | 2 cut(s) | 324, 454 |
| BstV2I | GAAGAC | 1 cut(s) | 879 |
| Bsu36I | CCTNAGG | 1 cut(s) | 525 |
| BsuRI | GGCC | 2 cut(s) | 200, 796 |
| BtsCI | GGATG | 3 cut(s) | 32, 126, 822 |
| BtsI | GCAGTG | 1 cut(s) | 276 |
| BtsIMutI | CAGTG | 1 cut(s) | 276 |
| Cac8I | GCNNGC | 1 cut(s) | 267 |
| CfoI | GCGC | 4 cut(s) | 447, 581, 762, 927 |
| Cfr13I | GGNCC | 2 cut(s) | 795, 833 |
| CseI | GACGC | 1 cut(s) | 627 |
| Csp6I | GTAC | 2 cut(s) | 282, 788 |
| CviAII | CATG | 3 cut(s) | 532, 813, 877 |
| CviQI | GTAC | 2 cut(s) | 282, 788 |
| DdeI | CTNAG | 4 cut(s) | 193, 455, 525, 644 |
| DpnI | GATC | 2 cut(s) | 69, 141 |
| DpnII | GATC | 2 cut(s) | 67, 139 |
| DraI | TTTAAA | 1 cut(s) | 774 |
| DraIII | CACNNNGTG | 1 cut(s) | 365 |
| Eam1104I | CTCTTC | 2 cut(s) | 72, 287 |
| EarI | CTCTTC | 2 cut(s) | 72, 287 |
| Eco130I | CCWWGG | 1 cut(s) | 210 |
| Eco32I | GATATC | 1 cut(s) | 560 |
| Eco47I | GGWCC | 1 cut(s) | 833 |
| Eco81I | CCTNAGG | 1 cut(s) | 525 |
| Eco88I | CYCGRG | 1 cut(s) | 718 |
| EcoRII | CCWGG | 1 cut(s) | 739 |
| EcoRV | GATATC | 1 cut(s) | 560 |
| EcoT14I | CCWWGG | 1 cut(s) | 210 |
| ErhI | CCWWGG | 1 cut(s) | 210 |
| Esp3I | CGTCTC | 1 cut(s) | 610 |
| FaeI | CATG | 3 cut(s) | 535, 816, 880 |
| FaiI | YATR | 7 cut(s) | 299, 533, 713, 734, 785, 814, 878 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 194, 226 |
| FatI | CATG | 3 cut(s) | 531, 812, 876 |
| Fnu4HI | GCNGC | 2 cut(s) | 338, 443 |
| FokI | GGATG | 3 cut(s) | 19, 133, 829 |
| Fsp4HI | GCNGC | 2 cut(s) | 338, 443 |
| FspBI | CTAG | 3 cut(s) | 546, 903, 928 |
| GlaI | GCGC | 4 cut(s) | 446, 580, 761, 926 |
| GluI | GCNGC | 2 cut(s) | 338, 443 |
| GsuI | CTGGAG | 1 cut(s) | 552 |
| HaeIII | GGCC | 2 cut(s) | 200, 796 |
| HapII | CCGG | 1 cut(s) | 779 |
| HgaI | GACGC | 1 cut(s) | 627 |
| HhaI | GCGC | 4 cut(s) | 447, 581, 762, 927 |
| Hin1II | CATG | 3 cut(s) | 535, 816, 880 |
| Hin6I | GCGC | 4 cut(s) | 445, 579, 760, 925 |
| HinP1I | GCGC | 4 cut(s) | 445, 579, 760, 925 |
| HindIII | AAGCTT | 1 cut(s) | 163 |
| HinfI | GANTC | 2 cut(s) | 310, 690 |
| HpaII | CCGG | 1 cut(s) | 779 |
| HphI | GGTGA | 2 cut(s) | 196, 348 |
| Hpy188I | TCNGA | 6 cut(s) | 110, 139, 196, 288, 330, 808 |
| Hpy188III | TCNNGA | 2 cut(s) | 173, 389 |
| Hpy99I | CGWCG | 1 cut(s) | 795 |
| HpyAV | CCTTC | 3 cut(s) | 162, 578, 874 |
| HpyCH4III | ACNGT | 3 cut(s) | 225, 477, 509 |
| HpyCH4IV | ACGT | 1 cut(s) | 790 |
| HpyCH4V | TGCA | 5 cut(s) | 340, 442, 596, 748, 823 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 439, 451 |
| HpyF3I | CTNAG | 4 cut(s) | 193, 455, 525, 644 |
| HpySE526I | ACGT | 1 cut(s) | 790 |
| Hsp92II | CATG | 3 cut(s) | 535, 816, 880 |
| HspAI | GCGC | 4 cut(s) | 445, 579, 760, 925 |
| Kzo9I | GATC | 2 cut(s) | 67, 139 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 5 cut(s) | 582, 726, 753, 792, 883 |
| Lsp1109I | GCAGC | 2 cut(s) | 324, 454 |
| LweI | GCATC | 2 cut(s) | 41, 923 |
| MaeI | CTAG | 3 cut(s) | 546, 903, 928 |
| MaeII | ACGT | 1 cut(s) | 790 |
| MalI | GATC | 2 cut(s) | 69, 141 |
| MboI | GATC | 2 cut(s) | 67, 139 |
| MboII | GAAGA | 8 cut(s) | 89, 199, 301, 304, 392, 426, 674, 884 |
| MluCI | AATT | 4 cut(s) | 305, 622, 657, 847 |
| MlyI | GAGTC | 1 cut(s) | 304 |
| MroXI | GAANNNNTTC | 2 cut(s) | 384, 666 |
| MseI | TTAA | 1 cut(s) | 773 |
| MspI | CCGG | 1 cut(s) | 779 |
| MspR9I | CCNGG | 2 cut(s) | 741, 779 |
| Mva1269I | GAATGC | 1 cut(s) | 549 |
| MvaI | CCWGG | 1 cut(s) | 741 |
| MvnI | CGCG | 1 cut(s) | 520 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 439, 451 |
| NciI | CCSGG | 1 cut(s) | 779 |
| NdeII | GATC | 2 cut(s) | 67, 139 |
| NlaIII | CATG | 3 cut(s) | 535, 816, 880 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmeAIII | GCCGAG | 1 cut(s) | 292 |
| NspV | TTCGAA | 1 cut(s) | 217 |
| PctI | GAATGC | 1 cut(s) | 549 |
| PdmI | GAANNNNTTC | 2 cut(s) | 384, 666 |
| PfeI | GAWTC | 1 cut(s) | 690 |
| PkrI | GCNGC | 2 cut(s) | 339, 444 |
| PleI | GAGTC | 1 cut(s) | 304 |
| PpsI | GAGTC | 1 cut(s) | 304 |
| Psp6I | CCWGG | 1 cut(s) | 739 |
| PspGI | CCWGG | 1 cut(s) | 739 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 2 cut(s) | 795, 833 |
| PstI | CTGCAG | 1 cut(s) | 342 |
| RsaI | GTAC | 2 cut(s) | 283, 789 |
| RsaNI | GTAC | 2 cut(s) | 282, 788 |
| SaqAI | TTAA | 1 cut(s) | 773 |
| SatI | GCNGC | 2 cut(s) | 338, 443 |
| Sau3AI | GATC | 2 cut(s) | 67, 139 |
| Sau96I | GGNCC | 2 cut(s) | 795, 833 |
| ScaI | AGTACT | 1 cut(s) | 283 |
| SchI | GAGTC | 1 cut(s) | 304 |
| ScrFI | CCNGG | 2 cut(s) | 741, 779 |
| SfaNI | GCATC | 2 cut(s) | 41, 923 |
| SfcI | CTRYAG | 1 cut(s) | 338 |
| SfuI | TTCGAA | 1 cut(s) | 217 |
| SinI | GGWCC | 1 cut(s) | 833 |
| SmlI | CTYRAG | 1 cut(s) | 37 |
| SmoI | CTYRAG | 1 cut(s) | 37 |
| Sse9I | AATT | 4 cut(s) | 305, 622, 657, 847 |
| SsiI | CCGC | 1 cut(s) | 518 |
| SspMI | CTAG | 3 cut(s) | 546, 903, 928 |
| StyD4I | CCNGG | 2 cut(s) | 739, 777 |
| StyI | CCWWGG | 1 cut(s) | 210 |
| TaaI | ACNGT | 3 cut(s) | 225, 477, 509 |
| TaiI | ACGT | 1 cut(s) | 793 |
| TaqI | TCGA | 2 cut(s) | 217, 562 |
| TasI | AATT | 4 cut(s) | 305, 622, 657, 847 |
| TatI | WGTACW | 1 cut(s) | 281 |
| TfiI | GAWTC | 1 cut(s) | 690 |
| Tru1I | TTAA | 1 cut(s) | 773 |
| Tru9I | TTAA | 1 cut(s) | 773 |
| TscAI | CASTG | 1 cut(s) | 276 |
| TseI | GCWGC | 2 cut(s) | 337, 442 |
| TspDTI | ATGAA | 3 cut(s) | 33, 144, 893 |
| TspRI | CASTG | 1 cut(s) | 276 |
| VpaK11BI | GGWCC | 1 cut(s) | 833 |
| XapI | RAATTY | 1 cut(s) | 847 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 70, 208 |
| XmnI | GAANNNNTTC | 2 cut(s) | 384, 666 |
| XspI | CTAG | 3 cut(s) | 546, 903, 928 |
| ZrmI | AGTACT | 1 cut(s) | 283 |