ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 429 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 14 |
| Acc36I | ACCTGC | 1 cut(s) | 429 |
| AciI | CCGC | 2 cut(s) | 77, 323 |
| AcuI | CTGAAG | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 349, 460, 488 |
| AgsI | TTSAA | 2 cut(s) | 202, 271 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 140, 172 |
| AluBI | AGCT | 2 cut(s) | 119, 503 |
| AluI | AGCT | 2 cut(s) | 119, 503 |
| Alw26I | GTCTC | 2 cut(s) | 128, 145 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| AspLEI | GCGC | 1 cut(s) | 475 |
| AsuII | TTCGAA | 1 cut(s) | 25 |
| BanII | GRGCYC | 1 cut(s) | 74 |
| BbvI | GCAGC | 1 cut(s) | 148 |
| BcoDI | GTCTC | 2 cut(s) | 128, 145 |
| BfaI | CTAG | 1 cut(s) | 504 |
| BfuAI | ACCTGC | 1 cut(s) | 429 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 247 |
| BisI | GCNGC | 2 cut(s) | 78, 162 |
| BlpI | GCTNAGC | 1 cut(s) | 73 |
| BlsI | GCNGC | 2 cut(s) | 79, 163 |
| BmiI | GGNNCC | 2 cut(s) | 251, 509 |
| BmsI | GCATC | 3 cut(s) | 249, 345, 460 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 73 |
| Bpu14I | TTCGAA | 1 cut(s) | 25 |
| BpuEI | CTTGAG | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 2 cut(s) | 179, 242 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 349, 460, 488 |
| Bse3DI | GCAATG | 1 cut(s) | 285 |
| BseDI | CCNNGG | 2 cut(s) | 179, 242 |
| BseGI | GGATG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 349, 460, 488 |
| BseMI | GCAATG | 1 cut(s) | 285 |
| BseMII | CTCAG | 2 cut(s) | 87, 213 |
| BseXI | GCAGC | 1 cut(s) | 148 |
| BseYI | CCCAGC | 1 cut(s) | 428 |
| BsgI | GTGCAG | 1 cut(s) | 147 |
| Bsh1285I | CGRYCG | 1 cut(s) | 60 |
| BsiEI | CGRYCG | 1 cut(s) | 60 |
| BslFI | GGGAC | 3 cut(s) | 209, 396, 464 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 349, 460, 488 |
| BsmAI | GTCTC | 2 cut(s) | 128, 145 |
| BsmFI | GGGAC | 3 cut(s) | 209, 396, 464 |
| Bsp119I | TTCGAA | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 74 |
| Bsp143I | GATC | 3 cut(s) | 57, 124, 439 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 73 |
| BspACI | CCGC | 2 cut(s) | 77, 323 |
| BspCNI | CTCAG | 2 cut(s) | 86, 214 |
| BspLI | GGNNCC | 2 cut(s) | 251, 509 |
| BspMI | ACCTGC | 1 cut(s) | 429 |
| BspT104I | TTCGAA | 1 cut(s) | 25 |
| BsrDI | GCAATG | 1 cut(s) | 285 |
| BssECI | CCNNGG | 2 cut(s) | 179, 242 |
| BssMI | GATC | 3 cut(s) | 57, 124, 439 |
| BssT1I | CCWWGG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 1 cut(s) | 168 |
| Bst6I | CTCTTC | 1 cut(s) | 143 |
| BstBI | TTCGAA | 1 cut(s) | 25 |
| BstC8I | GCNNGC | 1 cut(s) | 264 |
| BstDEI | CTNAG | 4 cut(s) | 73, 130, 222, 348 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 458 |
| BstF5I | GGATG | 1 cut(s) | 55 |
| BstHHI | GCGC | 1 cut(s) | 475 |
| BstKTI | GATC | 3 cut(s) | 60, 127, 442 |
| BstMAI | GTCTC | 2 cut(s) | 128, 145 |
| BstMBI | GATC | 3 cut(s) | 57, 124, 439 |
| BstMCI | CGRYCG | 1 cut(s) | 60 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 247 |
| BstV1I | GCAGC | 1 cut(s) | 148 |
| BtsCI | GGATG | 1 cut(s) | 55 |
| BtsIMutI | CAGTG | 1 cut(s) | 219 |
| BveI | ACCTGC | 1 cut(s) | 429 |
| Cac8I | GCNNGC | 1 cut(s) | 264 |
| CfoI | GCGC | 1 cut(s) | 475 |
| Csp6I | GTAC | 1 cut(s) | 11 |
| CviAII | CATG | 3 cut(s) | 44, 138, 330 |
| CviJI | RGCY | 6 cut(s) | 72, 119, 161, 250, 266, 503 |
| CviKI_1 | RGCY | 6 cut(s) | 72, 119, 161, 250, 266, 503 |
| CviQI | GTAC | 1 cut(s) | 11 |
| DdeI | CTNAG | 4 cut(s) | 73, 130, 222, 348 |
| DpnI | GATC | 3 cut(s) | 59, 126, 441 |
| DpnII | GATC | 3 cut(s) | 57, 124, 439 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 14 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 1 cut(s) | 143 |
| EarI | CTCTTC | 1 cut(s) | 143 |
| Eco130I | CCWWGG | 1 cut(s) | 179 |
| Eco24I | GRGCYC | 1 cut(s) | 74 |
| Eco57I | CTGAAG | 1 cut(s) | 167 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 458 |
| EcoT14I | CCWWGG | 1 cut(s) | 179 |
| EcoT38I | GRGCYC | 1 cut(s) | 74 |
| ErhI | CCWWGG | 1 cut(s) | 179 |
| FaeI | CATG | 3 cut(s) | 47, 141, 333 |
| FaqI | GGGAC | 3 cut(s) | 209, 396, 464 |
| FatI | CATG | 3 cut(s) | 43, 137, 329 |
| Fnu4HI | GCNGC | 2 cut(s) | 78, 162 |
| FokI | GGATG | 1 cut(s) | 62 |
| FriOI | GRGCYC | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 2 cut(s) | 78, 162 |
| FspBI | CTAG | 1 cut(s) | 504 |
| GlaI | GCGC | 1 cut(s) | 474 |
| GluI | GCNGC | 2 cut(s) | 78, 162 |
| GsaI | CCCAGC | 1 cut(s) | 432 |
| HhaI | GCGC | 1 cut(s) | 475 |
| Hin1II | CATG | 3 cut(s) | 47, 141, 333 |
| Hin6I | GCGC | 1 cut(s) | 473 |
| HinP1I | GCGC | 1 cut(s) | 473 |
| HincII | GTYRAC | 1 cut(s) | 93 |
| HindII | GTYRAC | 1 cut(s) | 93 |
| HinfI | GANTC | 2 cut(s) | 108, 142 |
| Hpy166II | GTNNAC | 1 cut(s) | 93 |
| Hpy188I | TCNGA | 6 cut(s) | 62, 147, 246, 337, 366, 439 |
| Hpy8I | GTNNAC | 1 cut(s) | 93 |
| HpyAV | CCTTC | 1 cut(s) | 277 |
| HpyCH4III | ACNGT | 1 cut(s) | 168 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 3 cut(s) | 164, 262, 390 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 247 |
| HpyF3I | CTNAG | 4 cut(s) | 73, 130, 222, 348 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 3 cut(s) | 47, 141, 333 |
| HspAI | GCGC | 1 cut(s) | 473 |
| Kzo9I | GATC | 3 cut(s) | 57, 124, 439 |
| LmnI | GCTCC | 1 cut(s) | 255 |
| LpnPI | CCDG | 5 cut(s) | 27, 81, 421, 434, 442 |
| Lsp1109I | GCAGC | 1 cut(s) | 148 |
| LweI | GCATC | 3 cut(s) | 249, 345, 460 |
| MaeI | CTAG | 1 cut(s) | 504 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MaeIII | GTNAC | 1 cut(s) | 290 |
| MalI | GATC | 3 cut(s) | 59, 126, 441 |
| MboI | GATC | 3 cut(s) | 57, 124, 439 |
| MboII | GAAGA | 1 cut(s) | 160 |
| MfeI | CAATTG | 1 cut(s) | 155 |
| MhlI | GDGCHC | 1 cut(s) | 74 |
| MluCI | AATT | 1 cut(s) | 155 |
| MnlI | CCTC | 8 cut(s) | 81, 227, 240, 252, 435, 454, 459, 492 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MunI | CAATTG | 1 cut(s) | 155 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 247 |
| NdeII | GATC | 3 cut(s) | 57, 124, 439 |
| NlaIII | CATG | 3 cut(s) | 47, 141, 333 |
| NlaIV | GGNNCC | 2 cut(s) | 251, 509 |
| NmuCI | GTSAC | 1 cut(s) | 290 |
| NspV | TTCGAA | 1 cut(s) | 25 |
| PaqCI | CACCTGC | 1 cut(s) | 429 |
| PfeI | GAWTC | 2 cut(s) | 108, 142 |
| PkrI | GCNGC | 2 cut(s) | 79, 163 |
| Ple19I | CGATCG | 1 cut(s) | 60 |
| PspFI | CCCAGC | 1 cut(s) | 428 |
| PspN4I | GGNNCC | 2 cut(s) | 251, 509 |
| PvuI | CGATCG | 1 cut(s) | 60 |
| RsaI | GTAC | 1 cut(s) | 12 |
| RsaNI | GTAC | 1 cut(s) | 11 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| SatI | GCNGC | 2 cut(s) | 78, 162 |
| Sau3AI | GATC | 3 cut(s) | 57, 124, 439 |
| SduI | GDGCHC | 1 cut(s) | 74 |
| SfaNI | GCATC | 3 cut(s) | 249, 345, 460 |
| SfuI | TTCGAA | 1 cut(s) | 25 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| SmlI | CTYRAG | 2 cut(s) | 114, 515 |
| SmoI | CTYRAG | 2 cut(s) | 114, 515 |
| Sse9I | AATT | 1 cut(s) | 155 |
| SsiI | CCGC | 2 cut(s) | 77, 323 |
| SspMI | CTAG | 1 cut(s) | 504 |
| StyI | CCWWGG | 1 cut(s) | 179 |
| TaaI | ACNGT | 1 cut(s) | 168 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TaqI | TCGA | 2 cut(s) | 25, 56 |
| TasI | AATT | 1 cut(s) | 155 |
| TauI | GCSGC | 1 cut(s) | 80 |
| TfiI | GAWTC | 2 cut(s) | 108, 142 |
| TscAI | CASTG | 1 cut(s) | 226 |
| TseFI | GTSAC | 1 cut(s) | 290 |
| TseI | GCWGC | 1 cut(s) | 161 |
| Tsp45I | GTSAC | 1 cut(s) | 290 |
| TspDTI | ATGAA | 2 cut(s) | 17, 219 |
| TspRI | CASTG | 1 cut(s) | 226 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 458 |
| XspI | CTAG | 1 cut(s) | 504 |