ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 69 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 87 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 2 cut(s) | 154, 245 |
| AluI | AGCT | 2 cut(s) | 154, 245 |
| AoxI | GGCC | 1 cut(s) | 110 |
| ApeKI | GCWGC | 1 cut(s) | 245 |
| BbvI | GCAGC | 1 cut(s) | 232 |
| BisI | GCNGC | 1 cut(s) | 246 |
| BlsI | GCNGC | 1 cut(s) | 247 |
| BsaJI | CCNNGG | 1 cut(s) | 127 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 87 |
| Bse1I | ACTGG | 1 cut(s) | 184 |
| BseDI | CCNNGG | 1 cut(s) | 127 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BseMII | CTCAG | 4 cut(s) | 223, 297, 310, 324 |
| BseNI | ACTGG | 1 cut(s) | 184 |
| BseXI | GCAGC | 1 cut(s) | 232 |
| BshFI | GGCC | 1 cut(s) | 112 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BsnI | GGCC | 1 cut(s) | 112 |
| BspACI | CCGC | 1 cut(s) | 69 |
| BspANI | GGCC | 1 cut(s) | 112 |
| BspCNI | CTCAG | 4 cut(s) | 222, 298, 309, 325 |
| BsrI | ACTGG | 1 cut(s) | 184 |
| BssECI | CCNNGG | 1 cut(s) | 127 |
| BssT1I | CCWWGG | 1 cut(s) | 127 |
| Bst6I | CTCTTC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 4 cut(s) | 209, 296, 306, 333 |
| BstV1I | GCAGC | 1 cut(s) | 232 |
| BsuRI | GGCC | 1 cut(s) | 112 |
| BtsIMutI | CAGTG | 2 cut(s) | 177, 304 |
| CviJI | RGCY | 6 cut(s) | 5, 80, 112, 120, 154, 245 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 80, 112, 120, 154, 245 |
| DdeI | CTNAG | 4 cut(s) | 209, 296, 306, 333 |
| Eam1104I | CTCTTC | 1 cut(s) | 86 |
| EarI | CTCTTC | 1 cut(s) | 86 |
| Eco130I | CCWWGG | 1 cut(s) | 127 |
| Eco147I | AGGCCT | 1 cut(s) | 112 |
| EcoT14I | CCWWGG | 1 cut(s) | 127 |
| ErhI | CCWWGG | 1 cut(s) | 127 |
| FaiI | YATR | 4 cut(s) | 63, 135, 189, 340 |
| Fnu4HI | GCNGC | 1 cut(s) | 246 |
| Fsp4HI | GCNGC | 1 cut(s) | 246 |
| GluI | GCNGC | 1 cut(s) | 246 |
| HaeIII | GGCC | 1 cut(s) | 112 |
| HinfI | GANTC | 2 cut(s) | 94, 260 |
| Hpy188I | TCNGA | 2 cut(s) | 307, 334 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyAV | CCTTC | 1 cut(s) | 46 |
| HpyF3I | CTNAG | 4 cut(s) | 209, 296, 306, 333 |
| LpnPI | CCDG | 6 cut(s) | 73, 94, 157, 165, 196, 210 |
| Lsp1109I | GCAGC | 1 cut(s) | 232 |
| MaeIII | GTNAC | 1 cut(s) | 175 |
| MboII | GAAGA | 2 cut(s) | 103, 322 |
| MluCI | AATT | 3 cut(s) | 19, 215, 290 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MnlI | CCTC | 2 cut(s) | 321, 328 |
| MseI | TTAA | 2 cut(s) | 18, 285 |
| MslI | CAYNNNNRTG | 1 cut(s) | 138 |
| MspA1I | CMGCKG | 1 cut(s) | 154 |
| NmuCI | GTSAC | 1 cut(s) | 175 |
| PceI | AGGCCT | 1 cut(s) | 112 |
| PfeI | GAWTC | 1 cut(s) | 260 |
| PkrI | GCNGC | 1 cut(s) | 247 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| PvuII | CAGCTG | 1 cut(s) | 154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 138 |
| SaqAI | TTAA | 2 cut(s) | 18, 285 |
| SatI | GCNGC | 1 cut(s) | 246 |
| SchI | GAGTC | 1 cut(s) | 103 |
| SetI | ASST | 4 cut(s) | 57, 156, 247, 332 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 138 |
| Sse9I | AATT | 3 cut(s) | 19, 215, 290 |
| SseBI | AGGCCT | 1 cut(s) | 112 |
| SsiI | CCGC | 1 cut(s) | 69 |
| StuI | AGGCCT | 1 cut(s) | 112 |
| StyI | CCWWGG | 1 cut(s) | 127 |
| TasI | AATT | 3 cut(s) | 19, 215, 290 |
| TfiI | GAWTC | 1 cut(s) | 260 |
| Tru1I | TTAA | 2 cut(s) | 18, 285 |
| Tru9I | TTAA | 2 cut(s) | 18, 285 |
| TscAI | CASTG | 2 cut(s) | 184, 304 |
| TseFI | GTSAC | 1 cut(s) | 175 |
| TseI | GCWGC | 1 cut(s) | 245 |
| Tsp45I | GTSAC | 1 cut(s) | 175 |
| TspDTI | ATGAA | 1 cut(s) | 303 |
| TspRI | CASTG | 2 cut(s) | 184, 304 |