ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 798 |
| AciI | CCGC | 3 cut(s) | 47, 160, 764 |
| AcsI | RAATTY | 3 cut(s) | 219, 353, 969 |
| AcuI | CTGAAG | 2 cut(s) | 1162, 1179 |
| AfaI | GTAC | 1 cut(s) | 410 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 593, 1007 |
| AgsI | TTSAA | 6 cut(s) | 214, 386, 473, 569, 674, 1130 |
| AjnI | CCWGG | 1 cut(s) | 85 |
| AleI | CACNNNNGTG | 1 cut(s) | 394 |
| AluBI | AGCT | 5 cut(s) | 482, 691, 833, 1025, 1121 |
| AluI | AGCT | 5 cut(s) | 482, 691, 833, 1025, 1121 |
| Alw26I | GTCTC | 2 cut(s) | 464, 1173 |
| AoxI | GGCC | 3 cut(s) | 248, 379, 731 |
| ApeKI | GCWGC | 2 cut(s) | 122, 1022 |
| ApoI | RAATTY | 3 cut(s) | 219, 353, 969 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 353 |
| AspLEI | GCGC | 4 cut(s) | 36, 268, 402, 799 |
| AspS9I | GGNCC | 2 cut(s) | 248, 579 |
| AsuC2I | CCSGG | 1 cut(s) | 78 |
| AsuHPI | GGTGA | 1 cut(s) | 732 |
| AvaII | GGWCC | 1 cut(s) | 579 |
| BbvI | GCAGC | 2 cut(s) | 134, 1034 |
| BccI | CCATC | 2 cut(s) | 882, 1001 |
| BciT130I | CCWGG | 1 cut(s) | 87 |
| BcnI | CCSGG | 1 cut(s) | 78 |
| BcoDI | GTCTC | 2 cut(s) | 464, 1173 |
| BfaI | CTAG | 1 cut(s) | 15 |
| BfmI | CTRYAG | 1 cut(s) | 261 |
| BfoI | RGCGCY | 1 cut(s) | 269 |
| BisI | GCNGC | 2 cut(s) | 123, 1023 |
| BlsI | GCNGC | 2 cut(s) | 124, 1024 |
| Bme1390I | CCNGG | 2 cut(s) | 78, 87 |
| Bme18I | GGWCC | 1 cut(s) | 579 |
| BmgT120I | GGNCC | 2 cut(s) | 248, 579 |
| BmiI | GGNNCC | 2 cut(s) | 75, 581 |
| BmrFI | CCNGG | 2 cut(s) | 78, 87 |
| BmrI | ACTGGG | 2 cut(s) | 435, 603 |
| BmsI | GCATC | 7 cut(s) | 33, 58, 147, 160, 542, 616, 1009 |
| BmuI | ACTGGG | 2 cut(s) | 435, 603 |
| BoxI | GACNNNNGTC | 3 cut(s) | 303, 456, 577 |
| BpuEI | CTTGAG | 1 cut(s) | 722 |
| BpuMI | CCSGG | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 85, 86, 191 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 20, 50, 421, 451 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 593, 1007 |
| Bse1I | ACTGG | 2 cut(s) | 441, 598 |
| BseBI | CCWGG | 1 cut(s) | 87 |
| BseDI | CCNNGG | 3 cut(s) | 85, 86, 191 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 593, 1007 |
| BseMII | CTCAG | 1 cut(s) | 657 |
| BseNI | ACTGG | 2 cut(s) | 441, 598 |
| BseRI | GAGGAG | 2 cut(s) | 28, 770 |
| BseXI | GCAGC | 2 cut(s) | 134, 1034 |
| BshFI | GGCC | 3 cut(s) | 250, 381, 733 |
| BsiSI | CCGG | 1 cut(s) | 77 |
| BslFI | GGGAC | 3 cut(s) | 565, 866, 1134 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 593, 1007 |
| BsmAI | GTCTC | 2 cut(s) | 464, 1173 |
| BsmFI | GGGAC | 3 cut(s) | 565, 866, 1134 |
| BsmI | GAATGC | 1 cut(s) | 16 |
| BsnI | GGCC | 3 cut(s) | 250, 381, 733 |
| Bsp143I | GATC | 3 cut(s) | 133, 718, 824 |
| BspACI | CCGC | 3 cut(s) | 47, 160, 764 |
| BspANI | GGCC | 3 cut(s) | 250, 381, 733 |
| BspCNI | CTCAG | 1 cut(s) | 658 |
| BspHI | TCATGA | 2 cut(s) | 723, 1071 |
| BspLI | GGNNCC | 2 cut(s) | 75, 581 |
| BsrI | ACTGG | 2 cut(s) | 441, 598 |
| BssECI | CCNNGG | 3 cut(s) | 85, 86, 191 |
| BssMI | GATC | 3 cut(s) | 133, 718, 824 |
| BssT1I | CCWWGG | 1 cut(s) | 191 |
| Bst2UI | CCWGG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 4 cut(s) | 302, 637, 750, 1086 |
| Bst6I | CTCTTC | 1 cut(s) | 722 |
| BstC8I | GCNNGC | 2 cut(s) | 205, 503 |
| BstDEI | CTNAG | 1 cut(s) | 666 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstH2I | RGCGCY | 1 cut(s) | 269 |
| BstHHI | GCGC | 4 cut(s) | 36, 268, 402, 799 |
| BstKTI | GATC | 3 cut(s) | 136, 721, 827 |
| BstMAI | GTCTC | 2 cut(s) | 464, 1173 |
| BstMBI | GATC | 3 cut(s) | 133, 718, 824 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 272 |
| BstNI | CCWGG | 1 cut(s) | 87 |
| BstNSI | RCATGY | 3 cut(s) | 662, 776, 1168 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 303, 456, 577 |
| BstSCI | CCNGG | 2 cut(s) | 76, 85 |
| BstSFI | CTRYAG | 1 cut(s) | 261 |
| BstV1I | GCAGC | 2 cut(s) | 134, 1034 |
| BsuRI | GGCC | 3 cut(s) | 250, 381, 733 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsI | GCAGTG | 1 cut(s) | 555 |
| BtsIMutI | CAGTG | 4 cut(s) | 448, 555, 1002, 1082 |
| Cac8I | GCNNGC | 2 cut(s) | 205, 503 |
| CciI | TCATGA | 2 cut(s) | 723, 1071 |
| CfoI | GCGC | 4 cut(s) | 36, 268, 402, 799 |
| Cfr13I | GGNCC | 2 cut(s) | 248, 579 |
| CseI | GACGC | 1 cut(s) | 356 |
| Csp6I | GTAC | 1 cut(s) | 409 |
| CviQI | GTAC | 1 cut(s) | 409 |
| DdeI | CTNAG | 1 cut(s) | 666 |
| DpnI | GATC | 3 cut(s) | 135, 720, 826 |
| DpnII | GATC | 3 cut(s) | 133, 718, 824 |
| Eam1104I | CTCTTC | 1 cut(s) | 722 |
| EarI | CTCTTC | 1 cut(s) | 722 |
| Eco130I | CCWWGG | 1 cut(s) | 191 |
| Eco147I | AGGCCT | 1 cut(s) | 381 |
| Eco47I | GGWCC | 1 cut(s) | 579 |
| Eco57I | CTGAAG | 2 cut(s) | 1162, 1179 |
| EcoRII | CCWGG | 1 cut(s) | 85 |
| EcoT14I | CCWWGG | 1 cut(s) | 191 |
| ErhI | CCWWGG | 1 cut(s) | 191 |
| FaqI | GGGAC | 3 cut(s) | 565, 866, 1134 |
| FauI | CCCGC | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 2 cut(s) | 123, 1023 |
| FokI | GGATG | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 123, 1023 |
| FspBI | CTAG | 1 cut(s) | 15 |
| FspI | TGCGCA | 1 cut(s) | 798 |
| GlaI | GCGC | 4 cut(s) | 35, 267, 401, 798 |
| GluI | GCNGC | 2 cut(s) | 123, 1023 |
| HaeII | RGCGCY | 1 cut(s) | 269 |
| HaeIII | GGCC | 3 cut(s) | 250, 381, 733 |
| HapII | CCGG | 1 cut(s) | 77 |
| HgaI | GACGC | 1 cut(s) | 356 |
| HhaI | GCGC | 4 cut(s) | 36, 268, 402, 799 |
| Hin6I | GCGC | 4 cut(s) | 34, 266, 400, 797 |
| HinP1I | GCGC | 4 cut(s) | 34, 266, 400, 797 |
| HinfI | GANTC | 4 cut(s) | 151, 321, 446, 1059 |
| HpaII | CCGG | 1 cut(s) | 77 |
| HphI | GGTGA | 1 cut(s) | 732 |
| Hpy188I | TCNGA | 5 cut(s) | 133, 156, 451, 1033, 1181 |
| Hpy188III | TCNNGA | 6 cut(s) | 137, 371, 701, 724, 828, 1072 |
| HpyAV | CCTTC | 4 cut(s) | 392, 842, 1154, 1183 |
| HpyCH4III | ACNGT | 4 cut(s) | 302, 637, 750, 1086 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 272 |
| HpyF3I | CTNAG | 1 cut(s) | 666 |
| HspAI | GCGC | 4 cut(s) | 34, 266, 400, 797 |
| Kzo9I | GATC | 3 cut(s) | 133, 718, 824 |
| LmnI | GCTCC | 4 cut(s) | 41, 364, 757, 1190 |
| Lsp1109I | GCAGC | 2 cut(s) | 134, 1034 |
| LweI | GCATC | 7 cut(s) | 33, 58, 147, 160, 542, 616, 1009 |
| MaeI | CTAG | 1 cut(s) | 15 |
| MaeIII | GTNAC | 2 cut(s) | 661, 1060 |
| MalI | GATC | 3 cut(s) | 135, 720, 826 |
| MboI | GATC | 3 cut(s) | 133, 718, 824 |
| MboII | GAAGA | 3 cut(s) | 739, 862, 1168 |
| MluCI | AATT | 5 cut(s) | 219, 353, 468, 624, 969 |
| MlyI | GAGTC | 2 cut(s) | 455, 1068 |
| MmeI | TCCRAC | 1 cut(s) | 429 |
| MroXI | GAANNNNTTC | 1 cut(s) | 353 |
| MseI | TTAA | 1 cut(s) | 842 |
| MslI | CAYNNNNRTG | 5 cut(s) | 57, 394, 543, 1052, 1101 |
| MspI | CCGG | 1 cut(s) | 77 |
| MspR9I | CCNGG | 2 cut(s) | 78, 87 |
| Mva1269I | GAATGC | 1 cut(s) | 16 |
| MvaI | CCWGG | 1 cut(s) | 87 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 272 |
| NciI | CCSGG | 1 cut(s) | 78 |
| NdeII | GATC | 3 cut(s) | 133, 718, 824 |
| NlaIV | GGNNCC | 2 cut(s) | 75, 581 |
| NmuCI | GTSAC | 1 cut(s) | 1060 |
| NsbI | TGCGCA | 1 cut(s) | 798 |
| NspI | RCATGY | 3 cut(s) | 662, 776, 1168 |
| OliI | CACNNNNGTG | 1 cut(s) | 394 |
| PagI | TCATGA | 2 cut(s) | 723, 1071 |
| PasI | CCCWGGG | 1 cut(s) | 86 |
| PceI | AGGCCT | 1 cut(s) | 381 |
| PctI | GAATGC | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 353 |
| PfeI | GAWTC | 2 cut(s) | 151, 321 |
| PflFI | GACNNNGTC | 1 cut(s) | 783 |
| PkrI | GCNGC | 2 cut(s) | 124, 1024 |
| PleI | GAGTC | 2 cut(s) | 454, 1067 |
| PpsI | GAGTC | 2 cut(s) | 454, 1067 |
| PshAI | GACNNNNGTC | 3 cut(s) | 303, 456, 577 |
| Psp6I | CCWGG | 1 cut(s) | 85 |
| PspGI | CCWGG | 1 cut(s) | 85 |
| PspN4I | GGNNCC | 2 cut(s) | 75, 581 |
| PspPI | GGNCC | 2 cut(s) | 248, 579 |
| PsyI | GACNNNGTC | 1 cut(s) | 783 |
| RsaI | GTAC | 1 cut(s) | 410 |
| RsaNI | GTAC | 1 cut(s) | 409 |
| RseI | CAYNNNNRTG | 5 cut(s) | 57, 394, 543, 1052, 1101 |
| SaqAI | TTAA | 1 cut(s) | 842 |
| SatI | GCNGC | 2 cut(s) | 123, 1023 |
| Sau3AI | GATC | 3 cut(s) | 133, 718, 824 |
| Sau96I | GGNCC | 2 cut(s) | 248, 579 |
| SchI | GAGTC | 2 cut(s) | 455, 1068 |
| ScrFI | CCNGG | 2 cut(s) | 78, 87 |
| SfaNI | GCATC | 7 cut(s) | 33, 58, 147, 160, 542, 616, 1009 |
| SfcI | CTRYAG | 1 cut(s) | 261 |
| SinI | GGWCC | 1 cut(s) | 579 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 57, 394, 543, 1052, 1101 |
| SmlI | CTYRAG | 1 cut(s) | 701 |
| SmoI | CTYRAG | 1 cut(s) | 701 |
| Sse9I | AATT | 5 cut(s) | 219, 353, 468, 624, 969 |
| SseBI | AGGCCT | 1 cut(s) | 381 |
| SsiI | CCGC | 3 cut(s) | 47, 160, 764 |
| SspI | AATATT | 3 cut(s) | 812, 994, 1186 |
| SspMI | CTAG | 1 cut(s) | 15 |
| StuI | AGGCCT | 1 cut(s) | 381 |
| StyD4I | CCNGG | 2 cut(s) | 76, 85 |
| StyI | CCWWGG | 1 cut(s) | 191 |
| TaaI | ACNGT | 4 cut(s) | 302, 637, 750, 1086 |
| TaqI | TCGA | 3 cut(s) | 27, 136, 347 |
| TasI | AATT | 5 cut(s) | 219, 353, 468, 624, 969 |
| TfiI | GAWTC | 2 cut(s) | 151, 321 |
| Tru1I | TTAA | 1 cut(s) | 842 |
| Tru9I | TTAA | 1 cut(s) | 842 |
| TscAI | CASTG | 4 cut(s) | 448, 562, 1009, 1089 |
| TseFI | GTSAC | 1 cut(s) | 1060 |
| TseI | GCWGC | 2 cut(s) | 122, 1022 |
| Tsp45I | GTSAC | 1 cut(s) | 1060 |
| TspDTI | ATGAA | 7 cut(s) | 91, 231, 728, 740, 872, 972, 1088 |
| TspRI | CASTG | 4 cut(s) | 448, 562, 1009, 1089 |
| Tth111I | GACNNNGTC | 1 cut(s) | 783 |
| VpaK11BI | GGWCC | 1 cut(s) | 579 |
| XapI | RAATTY | 3 cut(s) | 219, 353, 969 |
| XceI | RCATGY | 3 cut(s) | 662, 776, 1168 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 590 |
| XmnI | GAANNNNTTC | 1 cut(s) | 353 |
| XspI | CTAG | 1 cut(s) | 15 |