Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 351, 372 |
| AciI | CCGC | 4 cut(s) | 33, 36, 58, 116 |
| AclI | AACGTT | 1 cut(s) | 187 |
| AcyI | GRCGYC | 2 cut(s) | 348, 369 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 29, 35, 36, 392 |
| AgsI | TTSAA | 1 cut(s) | 176 |
| AjnI | CCWGG | 1 cut(s) | 336 |
| AluBI | AGCT | 1 cut(s) | 229 |
| AluI | AGCT | 1 cut(s) | 229 |
| AoxI | GGCC | 2 cut(s) | 157, 256 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 136, 168 |
| AspLEI | GCGC | 1 cut(s) | 294 |
| AspS9I | GGNCC | 1 cut(s) | 55 |
| AsuC2I | CCSGG | 2 cut(s) | 30, 386 |
| AvaII | GGWCC | 1 cut(s) | 55 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 287, 321 |
| BciT130I | CCWGG | 1 cut(s) | 338 |
| BcnI | CCSGG | 2 cut(s) | 30, 386 |
| BisI | GCNGC | 2 cut(s) | 34, 117 |
| BlsI | GCNGC | 2 cut(s) | 35, 118 |
| Bme1390I | CCNGG | 3 cut(s) | 30, 338, 386 |
| Bme18I | GGWCC | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 1 cut(s) | 55 |
| BmrFI | CCNGG | 3 cut(s) | 30, 338, 386 |
| BmsI | GCATC | 1 cut(s) | 190 |
| BpuMI | CCSGG | 2 cut(s) | 30, 386 |
| BsaBI | GATNNNNATC | 1 cut(s) | 332 |
| BsaHI | GRCGYC | 2 cut(s) | 348, 369 |
| BsaJI | CCNNGG | 1 cut(s) | 111 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 29, 35, 36, 392 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| Bse8I | GATNNNNATC | 1 cut(s) | 332 |
| BseBI | CCWGG | 1 cut(s) | 338 |
| BseDI | CCNNGG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 325 |
| BseJI | GATNNNNATC | 1 cut(s) | 332 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 29, 35, 36, 392 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BshFI | GGCC | 2 cut(s) | 159, 258 |
| BsiSI | CCGG | 2 cut(s) | 30, 386 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 29, 35, 36, 392 |
| BsmI | GAATGC | 1 cut(s) | 424 |
| BsnI | GGCC | 2 cut(s) | 159, 258 |
| Bsp143I | GATC | 1 cut(s) | 327 |
| BspACI | CCGC | 4 cut(s) | 33, 36, 58, 116 |
| BspANI | GGCC | 2 cut(s) | 159, 258 |
| BspHI | TCATGA | 2 cut(s) | 375, 408 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BssECI | CCNNGG | 1 cut(s) | 111 |
| BssMI | GATC | 1 cut(s) | 327 |
| BssNI | GRCGYC | 2 cut(s) | 348, 369 |
| Bst2UI | CCWGG | 1 cut(s) | 338 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| BstACI | GRCGYC | 2 cut(s) | 348, 369 |
| BstDEI | CTNAG | 2 cut(s) | 69, 203 |
| BstF5I | GGATG | 1 cut(s) | 325 |
| BstHHI | GCGC | 1 cut(s) | 294 |
| BstKTI | GATC | 1 cut(s) | 330 |
| BstMBI | GATC | 1 cut(s) | 327 |
| BstNI | CCWGG | 1 cut(s) | 338 |
| BstSCI | CCNGG | 3 cut(s) | 28, 336, 384 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 254 |
| BsuRI | GGCC | 2 cut(s) | 159, 258 |
| BtsCI | GGATG | 1 cut(s) | 325 |
| BtsI | GCAGTG | 2 cut(s) | 84, 214 |
| BtsIMutI | CAGTG | 2 cut(s) | 84, 214 |
| CciI | TCATGA | 2 cut(s) | 375, 408 |
| CfoI | GCGC | 1 cut(s) | 294 |
| Cfr13I | GGNCC | 1 cut(s) | 55 |
| CviAII | CATG | 3 cut(s) | 155, 376, 409 |
| CviJI | RGCY | 8 cut(s) | 28, 43, 67, 137, 159, 229, 258, 384 |
| CviKI_1 | RGCY | 8 cut(s) | 28, 43, 67, 137, 159, 229, 258, 384 |
| DdeI | CTNAG | 2 cut(s) | 69, 203 |
| DpnI | GATC | 1 cut(s) | 329 |
| DpnII | GATC | 1 cut(s) | 327 |
| Eco47I | GGWCC | 1 cut(s) | 55 |
| EcoRII | CCWGG | 1 cut(s) | 336 |
| FaeI | CATG | 3 cut(s) | 158, 379, 412 |
| FaiI | YATR | 8 cut(s) | 63, 134, 156, 234, 267, 377, 410, 420 |
| FatI | CATG | 3 cut(s) | 154, 375, 408 |
| FauI | CCCGC | 1 cut(s) | 29 |
| Fnu4HI | GCNGC | 2 cut(s) | 34, 117 |
| FokI | GGATG | 1 cut(s) | 332 |
| Fsp4HI | GCNGC | 2 cut(s) | 34, 117 |
| GlaI | GCGC | 1 cut(s) | 293 |
| GluI | GCNGC | 2 cut(s) | 34, 117 |
| HaeIII | GGCC | 2 cut(s) | 159, 258 |
| HapII | CCGG | 2 cut(s) | 30, 386 |
| HhaI | GCGC | 1 cut(s) | 294 |
| Hin1I | GRCGYC | 2 cut(s) | 348, 369 |
| Hin1II | CATG | 3 cut(s) | 158, 379, 412 |
| Hin6I | GCGC | 1 cut(s) | 292 |
| HinP1I | GCGC | 1 cut(s) | 292 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HindIII | AAGCTT | 1 cut(s) | 227 |
| HpaII | CCGG | 2 cut(s) | 30, 386 |
| Hpy166II | GTNNAC | 1 cut(s) | 352 |
| Hpy188I | TCNGA | 2 cut(s) | 112, 430 |
| Hpy188III | TCNNGA | 2 cut(s) | 376, 409 |
| Hpy8I | GTNNAC | 1 cut(s) | 352 |
| Hpy99I | CGWCG | 3 cut(s) | 302, 350, 374 |
| HpyAV | CCTTC | 1 cut(s) | 16 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4IV | ACGT | 3 cut(s) | 187, 348, 369 |
| HpyCH4V | TGCA | 3 cut(s) | 89, 274, 308 |
| HpyF3I | CTNAG | 2 cut(s) | 69, 203 |
| HpySE526I | ACGT | 3 cut(s) | 187, 348, 369 |
| Hsp92I | GRCGYC | 2 cut(s) | 348, 369 |
| Hsp92II | CATG | 3 cut(s) | 158, 379, 412 |
| HspAI | GCGC | 1 cut(s) | 292 |
| Kzo9I | GATC | 1 cut(s) | 327 |
| LmnI | GCTCC | 1 cut(s) | 224 |
| LpnPI | CCDG | 8 cut(s) | 38, 43, 112, 163, 179, 323, 350, 399 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeII | ACGT | 3 cut(s) | 187, 348, 369 |
| MalI | GATC | 1 cut(s) | 329 |
| MboI | GATC | 1 cut(s) | 327 |
| MboII | GAAGA | 1 cut(s) | 352 |
| MluCI | AATT | 1 cut(s) | 144 |
| MnlI | CCTC | 4 cut(s) | 106, 170, 269, 273 |
| MslI | CAYNNNNRTG | 1 cut(s) | 313 |
| MspI | CCGG | 2 cut(s) | 30, 386 |
| MspR9I | CCNGG | 3 cut(s) | 30, 338, 386 |
| Mva1269I | GAATGC | 1 cut(s) | 424 |
| MvaI | CCWGG | 1 cut(s) | 338 |
| NciI | CCSGG | 2 cut(s) | 30, 386 |
| NdeII | GATC | 1 cut(s) | 327 |
| NlaIII | CATG | 3 cut(s) | 158, 379, 412 |
| PagI | TCATGA | 2 cut(s) | 375, 408 |
| PctI | GAATGC | 1 cut(s) | 424 |
| PflFI | GACNNNGTC | 1 cut(s) | 371 |
| PkrI | GCNGC | 2 cut(s) | 35, 118 |
| Psp1406I | AACGTT | 1 cut(s) | 187 |
| Psp6I | CCWGG | 1 cut(s) | 336 |
| PspGI | CCWGG | 1 cut(s) | 336 |
| PspPI | GGNCC | 1 cut(s) | 55 |
| PsyI | GACNNNGTC | 1 cut(s) | 371 |
| RseI | CAYNNNNRTG | 1 cut(s) | 313 |
| SatI | GCNGC | 2 cut(s) | 34, 117 |
| Sau3AI | GATC | 1 cut(s) | 327 |
| Sau96I | GGNCC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 3 cut(s) | 30, 338, 386 |
| SetI | ASST | 8 cut(s) | 8, 57, 152, 190, 231, 239, 351, 372 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SinI | GGWCC | 1 cut(s) | 55 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 313 |
| Sse9I | AATT | 1 cut(s) | 144 |
| SsiI | CCGC | 4 cut(s) | 33, 36, 58, 116 |
| StyD4I | CCNGG | 3 cut(s) | 28, 336, 384 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TaiI | ACGT | 3 cut(s) | 190, 351, 372 |
| TaqI | TCGA | 1 cut(s) | 142 |
| TasI | AATT | 1 cut(s) | 144 |
| TauI | GCSGC | 2 cut(s) | 36, 119 |
| TscAI | CASTG | 2 cut(s) | 91, 221 |
| TspDTI | ATGAA | 3 cut(s) | 221, 352, 397 |
| TspGWI | ACGGA | 1 cut(s) | 408 |
| TspRI | CASTG | 2 cut(s) | 91, 221 |
| Tth111I | GACNNNGTC | 1 cut(s) | 371 |
| VpaK11BI | GGWCC | 1 cut(s) | 55 |
| ZraI | GACGTC | 2 cut(s) | 349, 370 |