ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 129 |
| AcsI | RAATTY | 1 cut(s) | 169 |
| AfaI | GTAC | 2 cut(s) | 122, 399 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 190 |
| AgsI | TTSAA | 2 cut(s) | 14, 341 |
| AhlI | ACTAGT | 1 cut(s) | 374 |
| Alw26I | GTCTC | 2 cut(s) | 31, 156 |
| AlwI | GGATC | 1 cut(s) | 129 |
| AoxI | GGCC | 1 cut(s) | 333 |
| ApaI | GGGCCC | 1 cut(s) | 337 |
| ApoI | RAATTY | 1 cut(s) | 169 |
| AseI | ATTAAT | 1 cut(s) | 284 |
| AspS9I | GGNCC | 2 cut(s) | 333, 334 |
| BaeGI | GKGCMC | 1 cut(s) | 337 |
| BanII | GRGCYC | 1 cut(s) | 337 |
| BbsI | GAAGAC | 1 cut(s) | 298 |
| BccI | CCATC | 2 cut(s) | 152, 192 |
| BceAI | ACGGC | 1 cut(s) | 279 |
| BcoDI | GTCTC | 2 cut(s) | 31, 156 |
| BcuI | ACTAGT | 1 cut(s) | 374 |
| BfaI | CTAG | 3 cut(s) | 315, 330, 375 |
| BmcAI | AGTACT | 1 cut(s) | 122 |
| BmgT120I | GGNCC | 2 cut(s) | 333, 334 |
| BmiI | GGNNCC | 1 cut(s) | 335 |
| BmsI | GCATC | 1 cut(s) | 343 |
| BpiI | GAAGAC | 1 cut(s) | 298 |
| BpmI | CTGGAG | 2 cut(s) | 36, 145 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 190 |
| Bse1I | ACTGG | 1 cut(s) | 128 |
| Bse3DI | GCAATG | 1 cut(s) | 254 |
| BseGI | GGATG | 2 cut(s) | 163, 421 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BseMI | GCAATG | 1 cut(s) | 254 |
| BseMII | CTCAG | 1 cut(s) | 258 |
| BseNI | ACTGG | 1 cut(s) | 128 |
| BseSI | GKGCMC | 1 cut(s) | 337 |
| BshFI | GGCC | 1 cut(s) | 335 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BsmAI | GTCTC | 2 cut(s) | 31, 156 |
| BsnI | GGCC | 1 cut(s) | 335 |
| Bsp120I | GGGCCC | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 1 cut(s) | 337 |
| Bsp1407I | TGTACA | 1 cut(s) | 397 |
| Bsp143I | GATC | 1 cut(s) | 134 |
| BspANI | GGCC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 1 cut(s) | 259 |
| BspLI | GGNNCC | 1 cut(s) | 335 |
| BspPI | GGATC | 1 cut(s) | 129 |
| BspQI | GCTCTTC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 1 cut(s) | 254 |
| BsrGI | TGTACA | 1 cut(s) | 397 |
| BsrI | ACTGG | 1 cut(s) | 128 |
| BssMI | GATC | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 1 cut(s) | 346 |
| Bst6I | CTCTTC | 2 cut(s) | 60, 316 |
| BstAUI | TGTACA | 1 cut(s) | 397 |
| BstC8I | GCNNGC | 1 cut(s) | 84 |
| BstDEI | CTNAG | 1 cut(s) | 267 |
| BstF5I | GGATG | 2 cut(s) | 163, 421 |
| BstKTI | GATC | 1 cut(s) | 137 |
| BstMAI | GTCTC | 2 cut(s) | 31, 156 |
| BstMBI | GATC | 1 cut(s) | 134 |
| BstNSI | RCATGY | 2 cut(s) | 86, 198 |
| BstSLI | GKGCMC | 1 cut(s) | 337 |
| BstV2I | GAAGAC | 1 cut(s) | 298 |
| BstX2I | RGATCY | 1 cut(s) | 134 |
| BstYI | RGATCY | 1 cut(s) | 134 |
| BsuRI | GGCC | 1 cut(s) | 335 |
| BtsCI | GGATG | 2 cut(s) | 163, 421 |
| Cac8I | GCNNGC | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 2 cut(s) | 333, 334 |
| CseI | GACGC | 1 cut(s) | 335 |
| Csp6I | GTAC | 2 cut(s) | 121, 398 |
| CviAII | CATG | 4 cut(s) | 83, 195, 242, 382 |
| CviJI | RGCY | 7 cut(s) | 96, 143, 151, 266, 291, 335, 403 |
| CviKI_1 | RGCY | 7 cut(s) | 96, 143, 151, 266, 291, 335, 403 |
| CviQI | GTAC | 2 cut(s) | 121, 398 |
| DdeI | CTNAG | 1 cut(s) | 267 |
| DpnI | GATC | 1 cut(s) | 136 |
| DpnII | GATC | 1 cut(s) | 134 |
| Eam1104I | CTCTTC | 2 cut(s) | 60, 316 |
| EarI | CTCTTC | 2 cut(s) | 60, 316 |
| Eco24I | GRGCYC | 1 cut(s) | 337 |
| EcoO109I | RGGNCCY | 2 cut(s) | 333, 334 |
| EcoT38I | GRGCYC | 1 cut(s) | 337 |
| FaeI | CATG | 4 cut(s) | 86, 198, 245, 385 |
| FaiI | YATR | 8 cut(s) | 35, 63, 84, 93, 196, 243, 276, 383 |
| FatI | CATG | 4 cut(s) | 82, 194, 241, 381 |
| FokI | GGATG | 1 cut(s) | 170 |
| FriOI | GRGCYC | 1 cut(s) | 337 |
| FspBI | CTAG | 3 cut(s) | 315, 330, 375 |
| GsuI | CTGGAG | 2 cut(s) | 36, 145 |
| HaeIII | GGCC | 1 cut(s) | 335 |
| HgaI | GACGC | 1 cut(s) | 335 |
| Hin1II | CATG | 4 cut(s) | 86, 198, 245, 385 |
| HinfI | GANTC | 2 cut(s) | 299, 389 |
| Hpy188I | TCNGA | 2 cut(s) | 259, 425 |
| Hpy188III | TCNNGA | 3 cut(s) | 14, 53, 138 |
| HpyAV | CCTTC | 1 cut(s) | 347 |
| HpyCH4III | ACNGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 1 cut(s) | 82 |
| HpyF3I | CTNAG | 1 cut(s) | 267 |
| Hsp92II | CATG | 4 cut(s) | 86, 198, 245, 385 |
| Kzo9I | GATC | 1 cut(s) | 134 |
| LguI | GCTCTTC | 1 cut(s) | 60 |
| LpnPI | CCDG | 4 cut(s) | 66, 109, 151, 187 |
| LweI | GCATC | 1 cut(s) | 343 |
| MaeI | CTAG | 3 cut(s) | 315, 330, 375 |
| MaeIII | GTNAC | 3 cut(s) | 197, 323, 370 |
| MalI | GATC | 1 cut(s) | 136 |
| MboI | GATC | 1 cut(s) | 134 |
| MboII | GAAGA | 3 cut(s) | 77, 298, 303 |
| MfeI | CAATTG | 1 cut(s) | 98 |
| MflI | RGATCY | 1 cut(s) | 134 |
| MhlI | GDGCHC | 1 cut(s) | 337 |
| MluCI | AATT | 3 cut(s) | 9, 98, 169 |
| MlyI | GAGTC | 1 cut(s) | 308 |
| MnlI | CCTC | 1 cut(s) | 120 |
| MseI | TTAA | 2 cut(s) | 222, 284 |
| MunI | CAATTG | 1 cut(s) | 98 |
| NdeII | GATC | 1 cut(s) | 134 |
| NlaIII | CATG | 4 cut(s) | 86, 198, 245, 385 |
| NlaIV | GGNNCC | 1 cut(s) | 335 |
| NmuCI | GTSAC | 2 cut(s) | 323, 370 |
| NspI | RCATGY | 2 cut(s) | 86, 198 |
| PaeI | GCATGC | 1 cut(s) | 86 |
| PciSI | GCTCTTC | 1 cut(s) | 60 |
| PfeI | GAWTC | 1 cut(s) | 389 |
| PleI | GAGTC | 1 cut(s) | 307 |
| PpsI | GAGTC | 1 cut(s) | 307 |
| PshBI | ATTAAT | 1 cut(s) | 284 |
| PspN4I | GGNNCC | 1 cut(s) | 335 |
| PspOMI | GGGCCC | 1 cut(s) | 333 |
| PspPI | GGNCC | 2 cut(s) | 333, 334 |
| PsuI | RGATCY | 1 cut(s) | 134 |
| RsaI | GTAC | 2 cut(s) | 122, 399 |
| RsaNI | GTAC | 2 cut(s) | 121, 398 |
| SapI | GCTCTTC | 1 cut(s) | 60 |
| SaqAI | TTAA | 2 cut(s) | 222, 284 |
| Sau3AI | GATC | 1 cut(s) | 134 |
| Sau96I | GGNCC | 2 cut(s) | 333, 334 |
| ScaI | AGTACT | 1 cut(s) | 122 |
| SchI | GAGTC | 1 cut(s) | 308 |
| SduI | GDGCHC | 1 cut(s) | 337 |
| SetI | ASST | 2 cut(s) | 80, 229 |
| SfaNI | GCATC | 1 cut(s) | 343 |
| SpeI | ACTAGT | 1 cut(s) | 374 |
| SphI | GCATGC | 1 cut(s) | 86 |
| Sse9I | AATT | 3 cut(s) | 9, 98, 169 |
| SspMI | CTAG | 3 cut(s) | 315, 330, 375 |
| TaaI | ACNGT | 1 cut(s) | 346 |
| TasI | AATT | 3 cut(s) | 9, 98, 169 |
| TatI | WGTACW | 2 cut(s) | 120, 397 |
| TfiI | GAWTC | 1 cut(s) | 389 |
| Tru1I | TTAA | 2 cut(s) | 222, 284 |
| Tru9I | TTAA | 2 cut(s) | 222, 284 |
| TseFI | GTSAC | 2 cut(s) | 323, 370 |
| Tsp45I | GTSAC | 2 cut(s) | 323, 370 |
| TspDTI | ATGAA | 3 cut(s) | 78, 398, 402 |
| TspGWI | ACGGA | 2 cut(s) | 170, 292 |
| VspI | ATTAAT | 1 cut(s) | 284 |
| XapI | RAATTY | 1 cut(s) | 169 |
| XceI | RCATGY | 2 cut(s) | 86, 198 |
| XspI | CTAG | 3 cut(s) | 315, 330, 375 |
| ZrmI | AGTACT | 1 cut(s) | 122 |