Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 279 |
| AccBSI | CCGCTC | 1 cut(s) | 583 |
| AciI | CCGC | 2 cut(s) | 250, 583 |
| AclWI | GGATC | 2 cut(s) | 141, 341 |
| AcoI | YGGCCR | 2 cut(s) | 467, 489 |
| AcyI | GRCGYC | 1 cut(s) | 276 |
| AfaI | GTAC | 1 cut(s) | 81 |
| AgsI | TTSAA | 2 cut(s) | 8, 430 |
| AjnI | CCWGG | 1 cut(s) | 557 |
| AluBI | AGCT | 3 cut(s) | 65, 86, 160 |
| AluI | AGCT | 3 cut(s) | 65, 86, 160 |
| Alw26I | GTCTC | 2 cut(s) | 258, 372 |
| AlwI | GGATC | 2 cut(s) | 141, 341 |
| AoxI | GGCC | 2 cut(s) | 467, 489 |
| ApeKI | GCWGC | 2 cut(s) | 396, 512 |
| AspLEI | GCGC | 1 cut(s) | 315 |
| AsuHPI | GGTGA | 1 cut(s) | 252 |
| BalI | TGGCCA | 1 cut(s) | 491 |
| BanII | GRGCYC | 1 cut(s) | 622 |
| BbvI | GCAGC | 2 cut(s) | 383, 499 |
| BccI | CCATC | 2 cut(s) | 341, 502 |
| BceAI | ACGGC | 1 cut(s) | 495 |
| BciT130I | CCWGG | 1 cut(s) | 559 |
| BcoDI | GTCTC | 2 cut(s) | 258, 372 |
| BfaI | CTAG | 2 cut(s) | 122, 161 |
| BfoI | RGCGCY | 1 cut(s) | 316 |
| BisI | GCNGC | 3 cut(s) | 397, 513, 584 |
| BlsI | GCNGC | 3 cut(s) | 398, 514, 585 |
| Bme1390I | CCNGG | 1 cut(s) | 559 |
| BmiI | GGNNCC | 1 cut(s) | 483 |
| BmrFI | CCNGG | 1 cut(s) | 559 |
| BmsI | GCATC | 1 cut(s) | 289 |
| BpmI | CTGGAG | 1 cut(s) | 580 |
| BsaHI | GRCGYC | 1 cut(s) | 276 |
| BsaI | GGTCTC | 2 cut(s) | 258, 372 |
| BsaJI | CCNNGG | 2 cut(s) | 407, 470 |
| BseBI | CCWGG | 1 cut(s) | 559 |
| BseDI | CCNNGG | 2 cut(s) | 407, 470 |
| BseXI | GCAGC | 2 cut(s) | 383, 499 |
| Bsh1285I | CGRYCG | 1 cut(s) | 592 |
| BshFI | GGCC | 2 cut(s) | 469, 491 |
| BsiEI | CGRYCG | 1 cut(s) | 592 |
| BsmAI | GTCTC | 2 cut(s) | 258, 372 |
| BsnI | GGCC | 2 cut(s) | 469, 491 |
| Bso31I | GGTCTC | 2 cut(s) | 258, 372 |
| Bsp1286I | GDGCHC | 1 cut(s) | 622 |
| Bsp143I | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| Bsp19I | CCATGG | 1 cut(s) | 407 |
| BspACI | CCGC | 2 cut(s) | 250, 583 |
| BspANI | GGCC | 2 cut(s) | 469, 491 |
| BspLI | GGNNCC | 1 cut(s) | 483 |
| BspPI | GGATC | 2 cut(s) | 141, 341 |
| BspTNI | GGTCTC | 2 cut(s) | 258, 372 |
| BsrBI | CCGCTC | 1 cut(s) | 583 |
| BssECI | CCNNGG | 2 cut(s) | 407, 470 |
| BssMI | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| BssNI | GRCGYC | 1 cut(s) | 276 |
| BssT1I | CCWWGG | 2 cut(s) | 407, 470 |
| Bst2UI | CCWGG | 1 cut(s) | 559 |
| Bst6I | CTCTTC | 1 cut(s) | 408 |
| BstACI | GRCGYC | 1 cut(s) | 276 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 299 |
| BstC8I | GCNNGC | 2 cut(s) | 240, 384 |
| BstDSI | CCRYGG | 1 cut(s) | 407 |
| BstH2I | RGCGCY | 1 cut(s) | 316 |
| BstHHI | GCGC | 1 cut(s) | 315 |
| BstKTI | GATC | 6 cut(s) | 136, 260, 336, 380, 523, 592 |
| BstMAI | GTCTC | 2 cut(s) | 258, 372 |
| BstMBI | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| BstMCI | CGRYCG | 1 cut(s) | 592 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 299, 488 |
| BstNI | CCWGG | 1 cut(s) | 559 |
| BstNSI | RCATGY | 1 cut(s) | 242 |
| BstSCI | CCNGG | 1 cut(s) | 557 |
| BstV1I | GCAGC | 2 cut(s) | 383, 499 |
| BsuRI | GGCC | 2 cut(s) | 469, 491 |
| BtgI | CCRYGG | 1 cut(s) | 407 |
| Cac8I | GCNNGC | 2 cut(s) | 240, 384 |
| CfoI | GCGC | 1 cut(s) | 315 |
| Csp6I | GTAC | 1 cut(s) | 80 |
| CviAII | CATG | 4 cut(s) | 239, 269, 408, 493 |
| CviQI | GTAC | 1 cut(s) | 80 |
| DpnI | GATC | 6 cut(s) | 135, 259, 335, 379, 522, 591 |
| DpnII | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| EaeI | YGGCCR | 2 cut(s) | 467, 489 |
| Eam1104I | CTCTTC | 1 cut(s) | 408 |
| EarI | CTCTTC | 1 cut(s) | 408 |
| Eco130I | CCWWGG | 2 cut(s) | 407, 470 |
| Eco24I | GRGCYC | 1 cut(s) | 622 |
| Eco31I | GGTCTC | 2 cut(s) | 258, 372 |
| EcoRII | CCWGG | 1 cut(s) | 557 |
| EcoT14I | CCWWGG | 2 cut(s) | 407, 470 |
| EcoT22I | ATGCAT | 1 cut(s) | 240 |
| EcoT38I | GRGCYC | 1 cut(s) | 622 |
| ErhI | CCWWGG | 2 cut(s) | 407, 470 |
| FaeI | CATG | 4 cut(s) | 242, 272, 411, 496 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 149, 181 |
| FatI | CATG | 4 cut(s) | 238, 268, 407, 492 |
| FauNDI | CATATG | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 3 cut(s) | 397, 513, 584 |
| FriOI | GRGCYC | 1 cut(s) | 622 |
| Fsp4HI | GCNGC | 3 cut(s) | 397, 513, 584 |
| FspBI | CTAG | 2 cut(s) | 122, 161 |
| GlaI | GCGC | 1 cut(s) | 314 |
| GluI | GCNGC | 3 cut(s) | 397, 513, 584 |
| GsuI | CTGGAG | 1 cut(s) | 580 |
| HaeII | RGCGCY | 1 cut(s) | 316 |
| HaeIII | GGCC | 2 cut(s) | 469, 491 |
| HhaI | GCGC | 1 cut(s) | 315 |
| Hin1I | GRCGYC | 1 cut(s) | 276 |
| Hin1II | CATG | 4 cut(s) | 242, 272, 411, 496 |
| Hin6I | GCGC | 1 cut(s) | 313 |
| HinP1I | GCGC | 1 cut(s) | 313 |
| HincII | GTYRAC | 2 cut(s) | 46, 274 |
| HindII | GTYRAC | 2 cut(s) | 46, 274 |
| HinfI | GANTC | 2 cut(s) | 143, 200 |
| HphI | GGTGA | 1 cut(s) | 252 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 274, 573 |
| Hpy188I | TCNGA | 2 cut(s) | 229, 377 |
| Hpy188III | TCNNGA | 1 cut(s) | 255 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 274, 573 |
| HpyCH4IV | ACGT | 2 cut(s) | 196, 276 |
| HpyCH4V | TGCA | 4 cut(s) | 238, 242, 302, 419 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 299, 488 |
| HpySE526I | ACGT | 2 cut(s) | 196, 276 |
| Hsp92I | GRCGYC | 1 cut(s) | 276 |
| Hsp92II | CATG | 4 cut(s) | 242, 272, 411, 496 |
| HspAI | GCGC | 1 cut(s) | 313 |
| Kzo9I | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| LmnI | GCTCC | 2 cut(s) | 487, 580 |
| LpnPI | CCDG | 8 cut(s) | 191, 208, 368, 405, 444, 529, 544, 571 |
| Lsp1109I | GCAGC | 2 cut(s) | 383, 499 |
| LweI | GCATC | 1 cut(s) | 289 |
| MaeI | CTAG | 2 cut(s) | 122, 161 |
| MaeII | ACGT | 2 cut(s) | 196, 276 |
| MaeIII | GTNAC | 1 cut(s) | 182 |
| MalI | GATC | 6 cut(s) | 135, 259, 335, 379, 522, 591 |
| MbiI | CCGCTC | 1 cut(s) | 583 |
| MboI | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| MboII | GAAGA | 2 cut(s) | 395, 513 |
| MhlI | GDGCHC | 1 cut(s) | 622 |
| MlsI | TGGCCA | 1 cut(s) | 491 |
| MluNI | TGGCCA | 1 cut(s) | 491 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MnlI | CCTC | 2 cut(s) | 345, 609 |
| Mox20I | TGGCCA | 1 cut(s) | 491 |
| Mph1103I | ATGCAT | 1 cut(s) | 240 |
| MscI | TGGCCA | 1 cut(s) | 491 |
| MseI | TTAA | 1 cut(s) | 168 |
| MslI | CAYNNNNRTG | 3 cut(s) | 307, 530, 610 |
| Msp20I | TGGCCA | 1 cut(s) | 491 |
| MspR9I | CCNGG | 1 cut(s) | 559 |
| MvaI | CCWGG | 1 cut(s) | 559 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 299, 488 |
| NcoI | CCATGG | 1 cut(s) | 407 |
| NdeI | CATATG | 1 cut(s) | 179 |
| NdeII | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| NlaIII | CATG | 4 cut(s) | 242, 272, 411, 496 |
| NlaIV | GGNNCC | 1 cut(s) | 483 |
| NsiI | ATGCAT | 1 cut(s) | 240 |
| NspI | RCATGY | 1 cut(s) | 242 |
| PaeI | GCATGC | 1 cut(s) | 242 |
| PfeI | GAWTC | 1 cut(s) | 143 |
| PkrI | GCNGC | 3 cut(s) | 398, 514, 585 |
| Ple19I | CGATCG | 1 cut(s) | 592 |
| PleI | GAGTC | 1 cut(s) | 208 |
| PpsI | GAGTC | 1 cut(s) | 208 |
| Psp6I | CCWGG | 1 cut(s) | 557 |
| PspGI | CCWGG | 1 cut(s) | 557 |
| PspN4I | GGNNCC | 1 cut(s) | 483 |
| PvuI | CGATCG | 1 cut(s) | 592 |
| RsaI | GTAC | 1 cut(s) | 81 |
| RsaNI | GTAC | 1 cut(s) | 80 |
| RseI | CAYNNNNRTG | 3 cut(s) | 307, 530, 610 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 3 cut(s) | 397, 513, 584 |
| Sau3AI | GATC | 6 cut(s) | 133, 257, 333, 377, 520, 589 |
| SchI | GAGTC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 1 cut(s) | 559 |
| SduI | GDGCHC | 1 cut(s) | 622 |
| SetI | ASST | 7 cut(s) | 67, 88, 162, 199, 279, 307, 560 |
| SfaNI | GCATC | 1 cut(s) | 289 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 307, 530, 610 |
| SphI | GCATGC | 1 cut(s) | 242 |
| SsiI | CCGC | 2 cut(s) | 250, 583 |
| SspMI | CTAG | 2 cut(s) | 122, 161 |
| StyD4I | CCNGG | 1 cut(s) | 557 |
| StyI | CCWWGG | 2 cut(s) | 407, 470 |
| TaiI | ACGT | 2 cut(s) | 199, 279 |
| TaqI | TCGA | 4 cut(s) | 88, 154, 256, 588 |
| TauI | GCSGC | 1 cut(s) | 586 |
| TfiI | GAWTC | 1 cut(s) | 143 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TseI | GCWGC | 2 cut(s) | 396, 512 |
| TspDTI | ATGAA | 1 cut(s) | 447 |
| XceI | RCATGY | 1 cut(s) | 242 |
| XspI | CTAG | 2 cut(s) | 122, 161 |
| ZraI | GACGTC | 1 cut(s) | 277 |
| Zsp2I | ATGCAT | 1 cut(s) | 240 |