Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 332 |
| AfaI | GTAC | 1 cut(s) | 118 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 148, 332 |
| AjnI | CCWGG | 1 cut(s) | 234 |
| Alw26I | GTCTC | 2 cut(s) | 323, 352 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 332 |
| AsuHPI | GGTGA | 2 cut(s) | 250, 286 |
| BccI | CCATC | 1 cut(s) | 265 |
| BciT130I | CCWGG | 1 cut(s) | 236 |
| BcoDI | GTCTC | 2 cut(s) | 323, 352 |
| BfaI | CTAG | 1 cut(s) | 284 |
| Bme1390I | CCNGG | 1 cut(s) | 236 |
| BmrFI | CCNGG | 1 cut(s) | 236 |
| BmsI | GCATC | 2 cut(s) | 256, 331 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 148, 332 |
| Bse1I | ACTGG | 2 cut(s) | 313, 337 |
| BseBI | CCWGG | 1 cut(s) | 236 |
| BseDI | CCNNGG | 1 cut(s) | 25 |
| BseGI | GGATG | 2 cut(s) | 223, 322 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 148, 332 |
| BseNI | ACTGG | 2 cut(s) | 313, 337 |
| Bsh1285I | CGRYCG | 1 cut(s) | 149 |
| BsiEI | CGRYCG | 1 cut(s) | 149 |
| BslFI | GGGAC | 1 cut(s) | 168 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 148, 332 |
| BsmAI | GTCTC | 2 cut(s) | 323, 352 |
| BsmFI | GGGAC | 1 cut(s) | 168 |
| Bsp143I | GATC | 3 cut(s) | 146, 178, 225 |
| BsrI | ACTGG | 2 cut(s) | 313, 337 |
| BssECI | CCNNGG | 1 cut(s) | 25 |
| BssMI | GATC | 3 cut(s) | 146, 178, 225 |
| BssT1I | CCWWGG | 1 cut(s) | 25 |
| Bst2UI | CCWGG | 1 cut(s) | 236 |
| Bst4CI | ACNGT | 1 cut(s) | 87 |
| BstDEI | CTNAG | 1 cut(s) | 101 |
| BstF5I | GGATG | 2 cut(s) | 223, 322 |
| BstKTI | GATC | 3 cut(s) | 149, 181, 228 |
| BstMAI | GTCTC | 2 cut(s) | 323, 352 |
| BstMBI | GATC | 3 cut(s) | 146, 178, 225 |
| BstMCI | CGRYCG | 1 cut(s) | 149 |
| BstNI | CCWGG | 1 cut(s) | 236 |
| BstSCI | CCNGG | 1 cut(s) | 234 |
| BtgZI | GCGATG | 2 cut(s) | 151, 284 |
| BtsCI | GGATG | 2 cut(s) | 223, 322 |
| BtsIMutI | CAGTG | 1 cut(s) | 306 |
| CaiI | CAGNNNCTG | 1 cut(s) | 332 |
| Csp6I | GTAC | 1 cut(s) | 117 |
| CviAII | CATG | 2 cut(s) | 53, 344 |
| CviJI | RGCY | 2 cut(s) | 283, 312 |
| CviKI_1 | RGCY | 2 cut(s) | 283, 312 |
| CviQI | GTAC | 1 cut(s) | 117 |
| DdeI | CTNAG | 1 cut(s) | 101 |
| DpnI | GATC | 3 cut(s) | 148, 180, 227 |
| DpnII | GATC | 3 cut(s) | 146, 178, 225 |
| Eco130I | CCWWGG | 1 cut(s) | 25 |
| EcoRII | CCWGG | 1 cut(s) | 234 |
| EcoT14I | CCWWGG | 1 cut(s) | 25 |
| ErhI | CCWWGG | 1 cut(s) | 25 |
| FaeI | CATG | 2 cut(s) | 56, 347 |
| FaiI | YATR | 3 cut(s) | 54, 132, 345 |
| FaqI | GGGAC | 1 cut(s) | 168 |
| FatI | CATG | 2 cut(s) | 52, 343 |
| FokI | GGATG | 2 cut(s) | 230, 309 |
| FspBI | CTAG | 1 cut(s) | 284 |
| Hin1II | CATG | 2 cut(s) | 56, 347 |
| HincII | GTYRAC | 1 cut(s) | 338 |
| HindII | GTYRAC | 1 cut(s) | 338 |
| HinfI | GANTC | 2 cut(s) | 70, 221 |
| HphI | GGTGA | 2 cut(s) | 250, 286 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 338 |
| Hpy188I | TCNGA | 2 cut(s) | 12, 75 |
| Hpy188III | TCNNGA | 1 cut(s) | 326 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 338 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 87 |
| HpyCH4IV | ACGT | 1 cut(s) | 291 |
| HpyCH4V | TGCA | 1 cut(s) | 206 |
| HpyF3I | CTNAG | 1 cut(s) | 101 |
| HpySE526I | ACGT | 1 cut(s) | 291 |
| Hsp92II | CATG | 2 cut(s) | 56, 347 |
| Kzo9I | GATC | 3 cut(s) | 146, 178, 225 |
| LpnPI | CCDG | 6 cut(s) | 180, 221, 248, 294, 318, 339 |
| LweI | GCATC | 2 cut(s) | 256, 331 |
| MaeI | CTAG | 1 cut(s) | 284 |
| MaeII | ACGT | 1 cut(s) | 291 |
| MalI | GATC | 3 cut(s) | 148, 180, 227 |
| MboI | GATC | 3 cut(s) | 146, 178, 225 |
| MluCI | AATT | 2 cut(s) | 4, 19 |
| MnlI | CCTC | 4 cut(s) | 35, 68, 171, 191 |
| MslI | CAYNNNNRTG | 1 cut(s) | 211 |
| MspR9I | CCNGG | 1 cut(s) | 236 |
| MvaI | CCWGG | 1 cut(s) | 236 |
| NdeII | GATC | 3 cut(s) | 146, 178, 225 |
| NlaIII | CATG | 2 cut(s) | 56, 347 |
| PfeI | GAWTC | 2 cut(s) | 70, 221 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 332 |
| Ple19I | CGATCG | 1 cut(s) | 149 |
| Psp6I | CCWGG | 1 cut(s) | 234 |
| PspGI | CCWGG | 1 cut(s) | 234 |
| PstNI | CAGNNNCTG | 1 cut(s) | 332 |
| PvuI | CGATCG | 1 cut(s) | 149 |
| RsaI | GTAC | 1 cut(s) | 118 |
| RsaNI | GTAC | 1 cut(s) | 117 |
| RseI | CAYNNNNRTG | 1 cut(s) | 211 |
| Sau3AI | GATC | 3 cut(s) | 146, 178, 225 |
| ScrFI | CCNGG | 1 cut(s) | 236 |
| SetI | ASST | 5 cut(s) | 31, 202, 240, 257, 294 |
| SfaNI | GCATC | 2 cut(s) | 256, 331 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 211 |
| SmlI | CTYRAG | 1 cut(s) | 59 |
| SmoI | CTYRAG | 1 cut(s) | 59 |
| Sse9I | AATT | 2 cut(s) | 4, 19 |
| SspMI | CTAG | 1 cut(s) | 284 |
| StyD4I | CCNGG | 1 cut(s) | 234 |
| StyI | CCWWGG | 1 cut(s) | 25 |
| TaaI | ACNGT | 1 cut(s) | 87 |
| TaiI | ACGT | 1 cut(s) | 294 |
| TaqI | TCGA | 2 cut(s) | 145, 224 |
| TasI | AATT | 2 cut(s) | 4, 19 |
| TfiI | GAWTC | 2 cut(s) | 70, 221 |
| TscAI | CASTG | 1 cut(s) | 313 |
| TspDTI | ATGAA | 2 cut(s) | 17, 250 |
| TspRI | CASTG | 1 cut(s) | 313 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 332 |
| XspI | CTAG | 1 cut(s) | 284 |