Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 99 |
| AccI | GTMKAC | 1 cut(s) | 116 |
| AclWI | GGATC | 1 cut(s) | 228 |
| AcsI | RAATTY | 1 cut(s) | 284 |
| AfaI | GTAC | 1 cut(s) | 551 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 295, 362 |
| AflIII | ACRYGT | 1 cut(s) | 541 |
| AgsI | TTSAA | 4 cut(s) | 164, 242, 254, 263 |
| AluBI | AGCT | 4 cut(s) | 38, 203, 275, 481 |
| AluI | AGCT | 4 cut(s) | 38, 203, 275, 481 |
| Alw21I | GWGCWC | 1 cut(s) | 277 |
| Alw26I | GTCTC | 2 cut(s) | 139, 447 |
| AlwI | GGATC | 1 cut(s) | 228 |
| ApoI | RAATTY | 1 cut(s) | 284 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 258 |
| AspS9I | GGNCC | 1 cut(s) | 26 |
| AvaII | GGWCC | 1 cut(s) | 26 |
| BaeGI | GKGCMC | 3 cut(s) | 102, 352, 559 |
| BanI | GGYRCC | 1 cut(s) | 99 |
| BanII | GRGCYC | 1 cut(s) | 277 |
| BbsI | GAAGAC | 1 cut(s) | 415 |
| Bbv12I | GWGCWC | 1 cut(s) | 277 |
| BbvCI | CCTCAGC | 1 cut(s) | 513 |
| BcoDI | GTCTC | 2 cut(s) | 139, 447 |
| BfaI | CTAG | 2 cut(s) | 11, 33 |
| Bme18I | GGWCC | 1 cut(s) | 26 |
| BmgT120I | GGNCC | 1 cut(s) | 26 |
| BmiI | GGNNCC | 1 cut(s) | 101 |
| BpiI | GAAGAC | 1 cut(s) | 415 |
| BpmI | CTGGAG | 1 cut(s) | 181 |
| Bpu10I | CCTNAGC | 1 cut(s) | 513 |
| BsaJI | CCNNGG | 2 cut(s) | 103, 278 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 169, 199 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 295, 362 |
| Bse3DI | GCAATG | 1 cut(s) | 54 |
| BseDI | CCNNGG | 2 cut(s) | 103, 278 |
| BseGI | GGATG | 1 cut(s) | 499 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 295, 362 |
| BseMI | GCAATG | 1 cut(s) | 54 |
| BseMII | CTCAG | 1 cut(s) | 527 |
| BseSI | GKGCMC | 3 cut(s) | 102, 352, 559 |
| Bsh1285I | CGRYCG | 1 cut(s) | 154 |
| BshNI | GGYRCC | 1 cut(s) | 99 |
| BsiEI | CGRYCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 277 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 295, 362 |
| BsmAI | GTCTC | 2 cut(s) | 139, 447 |
| Bsp1286I | GDGCHC | 4 cut(s) | 102, 277, 352, 559 |
| Bsp143I | GATC | 4 cut(s) | 151, 220, 330, 393 |
| BspCNI | CTCAG | 1 cut(s) | 526 |
| BspLI | GGNNCC | 1 cut(s) | 101 |
| BspPI | GGATC | 1 cut(s) | 228 |
| BspT107I | GGYRCC | 1 cut(s) | 99 |
| BsrDI | GCAATG | 1 cut(s) | 54 |
| BssECI | CCNNGG | 2 cut(s) | 103, 278 |
| BssMI | GATC | 4 cut(s) | 151, 220, 330, 393 |
| BssNAI | GTATAC | 1 cut(s) | 117 |
| BssT1I | CCWWGG | 1 cut(s) | 103 |
| Bst1107I | GTATAC | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 2 cut(s) | 342, 554 |
| BstDEI | CTNAG | 1 cut(s) | 513 |
| BstDSI | CCRYGG | 1 cut(s) | 278 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 360 |
| BstF5I | GGATG | 1 cut(s) | 499 |
| BstKTI | GATC | 4 cut(s) | 154, 223, 333, 396 |
| BstMAI | GTCTC | 2 cut(s) | 139, 447 |
| BstMBI | GATC | 4 cut(s) | 151, 220, 330, 393 |
| BstMCI | CGRYCG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 44 |
| BstNSI | RCATGY | 1 cut(s) | 545 |
| BstSLI | GKGCMC | 3 cut(s) | 102, 352, 559 |
| BstV2I | GAAGAC | 1 cut(s) | 415 |
| BstZ17I | GTATAC | 1 cut(s) | 117 |
| BtgI | CCRYGG | 1 cut(s) | 278 |
| BtsCI | GGATG | 1 cut(s) | 499 |
| BtsI | GCAGTG | 1 cut(s) | 428 |
| BtsIMutI | CAGTG | 3 cut(s) | 347, 428, 559 |
| Cfr13I | GGNCC | 1 cut(s) | 26 |
| Csp6I | GTAC | 1 cut(s) | 550 |
| CviAII | CATG | 4 cut(s) | 74, 174, 373, 542 |
| CviJI | RGCY | 5 cut(s) | 38, 158, 203, 275, 481 |
| CviKI_1 | RGCY | 5 cut(s) | 38, 158, 203, 275, 481 |
| CviQI | GTAC | 1 cut(s) | 550 |
| DdeI | CTNAG | 1 cut(s) | 513 |
| DpnI | GATC | 4 cut(s) | 153, 222, 332, 395 |
| DpnII | GATC | 4 cut(s) | 151, 220, 330, 393 |
| Ecl136II | GAGCTC | 1 cut(s) | 275 |
| Eco130I | CCWWGG | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 1 cut(s) | 277 |
| Eco47I | GGWCC | 1 cut(s) | 26 |
| Eco53kI | GAGCTC | 1 cut(s) | 275 |
| EcoICRI | GAGCTC | 1 cut(s) | 275 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 360 |
| EcoO109I | RGGNCCY | 1 cut(s) | 26 |
| EcoT14I | CCWWGG | 1 cut(s) | 103 |
| EcoT22I | ATGCAT | 1 cut(s) | 75 |
| EcoT38I | GRGCYC | 1 cut(s) | 277 |
| ErhI | CCWWGG | 1 cut(s) | 103 |
| FaeI | CATG | 4 cut(s) | 77, 177, 376, 545 |
| FatI | CATG | 4 cut(s) | 73, 173, 372, 541 |
| FblI | GTMKAC | 1 cut(s) | 116 |
| FokI | GGATG | 1 cut(s) | 486 |
| FriOI | GRGCYC | 1 cut(s) | 277 |
| FspBI | CTAG | 2 cut(s) | 11, 33 |
| GsuI | CTGGAG | 1 cut(s) | 181 |
| Hin1II | CATG | 4 cut(s) | 77, 177, 376, 545 |
| HinfI | GANTC | 3 cut(s) | 147, 215, 496 |
| Hpy166II | GTNNAC | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 2 cut(s) | 214, 220 |
| Hpy188III | TCNNGA | 3 cut(s) | 21, 198, 391 |
| Hpy8I | GTNNAC | 1 cut(s) | 117 |
| HpyAV | CCTTC | 2 cut(s) | 133, 427 |
| HpyCH4III | ACNGT | 2 cut(s) | 342, 554 |
| HpyCH4V | TGCA | 4 cut(s) | 47, 73, 324, 421 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 44 |
| HpyF3I | CTNAG | 1 cut(s) | 513 |
| Hsp92II | CATG | 4 cut(s) | 77, 177, 376, 545 |
| Kzo9I | GATC | 4 cut(s) | 151, 220, 330, 393 |
| LmnI | GCTCC | 1 cut(s) | 280 |
| LpnPI | CCDG | 3 cut(s) | 6, 211, 348 |
| MaeI | CTAG | 2 cut(s) | 11, 33 |
| MalI | GATC | 4 cut(s) | 153, 222, 332, 395 |
| MboI | GATC | 4 cut(s) | 151, 220, 330, 393 |
| MboII | GAAGA | 2 cut(s) | 75, 420 |
| MhlI | GDGCHC | 4 cut(s) | 102, 277, 352, 559 |
| MluCI | AATT | 4 cut(s) | 164, 237, 284, 536 |
| MlyI | GAGTC | 3 cut(s) | 141, 209, 490 |
| MnlI | CCTC | 6 cut(s) | 17, 39, 289, 430, 517, 522 |
| Mph1103I | ATGCAT | 1 cut(s) | 75 |
| MroXI | GAANNNNTTC | 1 cut(s) | 258 |
| MseI | TTAA | 1 cut(s) | 359 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 44 |
| NdeII | GATC | 4 cut(s) | 151, 220, 330, 393 |
| NlaIII | CATG | 4 cut(s) | 77, 177, 376, 545 |
| NlaIV | GGNNCC | 1 cut(s) | 101 |
| NsiI | ATGCAT | 1 cut(s) | 75 |
| NspI | RCATGY | 1 cut(s) | 545 |
| PciI | ACATGT | 1 cut(s) | 541 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 286 |
| PdmI | GAANNNNTTC | 1 cut(s) | 258 |
| Ple19I | CGATCG | 1 cut(s) | 154 |
| PleI | GAGTC | 3 cut(s) | 141, 209, 490 |
| PpsI | GAGTC | 3 cut(s) | 141, 209, 490 |
| PpuMI | RGGWCCY | 1 cut(s) | 26 |
| PscI | ACATGT | 1 cut(s) | 541 |
| Psp124BI | GAGCTC | 1 cut(s) | 277 |
| Psp5II | RGGWCCY | 1 cut(s) | 26 |
| PspN4I | GGNNCC | 1 cut(s) | 101 |
| PspPI | GGNCC | 1 cut(s) | 26 |
| PspPPI | RGGWCCY | 1 cut(s) | 26 |
| PvuI | CGATCG | 1 cut(s) | 154 |
| RsaI | GTAC | 1 cut(s) | 551 |
| RsaNI | GTAC | 1 cut(s) | 550 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SacI | GAGCTC | 1 cut(s) | 277 |
| SaqAI | TTAA | 1 cut(s) | 359 |
| Sau3AI | GATC | 4 cut(s) | 151, 220, 330, 393 |
| Sau96I | GGNCC | 1 cut(s) | 26 |
| SchI | GAGTC | 3 cut(s) | 141, 209, 490 |
| SduI | GDGCHC | 4 cut(s) | 102, 277, 352, 559 |
| SetI | ASST | 9 cut(s) | 28, 40, 116, 205, 277, 358, 367, 441, 483 |
| SinI | GGWCC | 1 cut(s) | 26 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| Sse9I | AATT | 4 cut(s) | 164, 237, 284, 536 |
| SspMI | CTAG | 2 cut(s) | 11, 33 |
| SstI | GAGCTC | 1 cut(s) | 277 |
| StyI | CCWWGG | 1 cut(s) | 103 |
| TaaI | ACNGT | 2 cut(s) | 342, 554 |
| TaqI | TCGA | 2 cut(s) | 150, 154 |
| TasI | AATT | 4 cut(s) | 164, 237, 284, 536 |
| TatI | WGTACW | 1 cut(s) | 549 |
| Tru1I | TTAA | 1 cut(s) | 359 |
| Tru9I | TTAA | 1 cut(s) | 359 |
| TscAI | CASTG | 3 cut(s) | 347, 428, 559 |
| TspDTI | ATGAA | 1 cut(s) | 389 |
| TspGWI | ACGGA | 2 cut(s) | 278, 295 |
| TspRI | CASTG | 3 cut(s) | 347, 428, 559 |
| VpaK11BI | GGWCC | 1 cut(s) | 26 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 360 |
| XapI | RAATTY | 1 cut(s) | 284 |
| XceI | RCATGY | 1 cut(s) | 545 |
| XmiI | GTMKAC | 1 cut(s) | 116 |
| XmnI | GAANNNNTTC | 1 cut(s) | 258 |
| XspI | CTAG | 2 cut(s) | 11, 33 |
| Zsp2I | ATGCAT | 1 cut(s) | 75 |