Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 488 |
| AccI | GTMKAC | 2 cut(s) | 213, 503 |
| AciI | CCGC | 1 cut(s) | 488 |
| AclWI | GGATC | 1 cut(s) | 327 |
| AfaI | GTAC | 1 cut(s) | 553 |
| AgsI | TTSAA | 4 cut(s) | 40, 91, 98, 379 |
| AjiI | CACGTC | 1 cut(s) | 238 |
| AjnI | CCWGG | 1 cut(s) | 288 |
| AluBI | AGCT | 3 cut(s) | 46, 94, 560 |
| AluI | AGCT | 3 cut(s) | 46, 94, 560 |
| Alw26I | GTCTC | 1 cut(s) | 287 |
| AlwI | GGATC | 1 cut(s) | 327 |
| ApeKI | GCWGC | 1 cut(s) | 5 |
| AspS9I | GGNCC | 1 cut(s) | 245 |
| AsuC2I | CCSGG | 2 cut(s) | 29, 316 |
| AsuHPI | GGTGA | 2 cut(s) | 82, 278 |
| AvaII | GGWCC | 1 cut(s) | 245 |
| BccI | CCATC | 1 cut(s) | 355 |
| BciT130I | CCWGG | 1 cut(s) | 290 |
| BcnI | CCSGG | 2 cut(s) | 29, 316 |
| BcoDI | GTCTC | 1 cut(s) | 287 |
| BfaI | CTAG | 7 cut(s) | 18, 159, 389, 408, 473, 482, 536 |
| BglII | AGATCT | 1 cut(s) | 478 |
| BisI | GCNGC | 2 cut(s) | 6, 489 |
| BlsI | GCNGC | 2 cut(s) | 7, 490 |
| BmcAI | AGTACT | 1 cut(s) | 553 |
| Bme1390I | CCNGG | 3 cut(s) | 29, 290, 316 |
| Bme18I | GGWCC | 1 cut(s) | 245 |
| BmgBI | CACGTC | 1 cut(s) | 238 |
| BmgT120I | GGNCC | 1 cut(s) | 245 |
| BmrFI | CCNGG | 3 cut(s) | 29, 290, 316 |
| BmsI | GCATC | 3 cut(s) | 220, 430, 505 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 502, 534 |
| BpmI | CTGGAG | 2 cut(s) | 311, 540 |
| BpuMI | CCSGG | 2 cut(s) | 29, 316 |
| BsaJI | CCNNGG | 1 cut(s) | 315 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 406, 436 |
| Bse1I | ACTGG | 2 cut(s) | 247, 301 |
| BseBI | CCWGG | 1 cut(s) | 290 |
| BseDI | CCNNGG | 1 cut(s) | 315 |
| BseGI | GGATG | 2 cut(s) | 255, 445 |
| BseNI | ACTGG | 2 cut(s) | 247, 301 |
| BsiSI | CCGG | 2 cut(s) | 29, 315 |
| BslFI | GGGAC | 1 cut(s) | 194 |
| BsmAI | GTCTC | 1 cut(s) | 287 |
| BsmFI | GGGAC | 1 cut(s) | 194 |
| Bsp143I | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| BspACI | CCGC | 1 cut(s) | 488 |
| BspPI | GGATC | 1 cut(s) | 327 |
| BspQI | GCTCTTC | 1 cut(s) | 177 |
| BsrBI | CCGCTC | 1 cut(s) | 488 |
| BsrI | ACTGG | 2 cut(s) | 247, 301 |
| BssECI | CCNNGG | 1 cut(s) | 315 |
| BssMI | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| BssNAI | GTATAC | 1 cut(s) | 504 |
| Bst1107I | GTATAC | 1 cut(s) | 504 |
| Bst2UI | CCWGG | 1 cut(s) | 290 |
| Bst4CI | ACNGT | 1 cut(s) | 106 |
| Bst6I | CTCTTC | 1 cut(s) | 177 |
| BstC8I | GCNNGC | 1 cut(s) | 340 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstEII | GGTNACC | 1 cut(s) | 284 |
| BstF5I | GGATG | 2 cut(s) | 255, 445 |
| BstKTI | GATC | 5 cut(s) | 145, 154, 322, 481, 541 |
| BstMAI | GTCTC | 1 cut(s) | 287 |
| BstMBI | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| BstNI | CCWGG | 1 cut(s) | 290 |
| BstPI | GGTNACC | 1 cut(s) | 284 |
| BstSCI | CCNGG | 3 cut(s) | 27, 288, 314 |
| BstX2I | RGATCY | 2 cut(s) | 319, 478 |
| BstYI | RGATCY | 2 cut(s) | 319, 478 |
| BstZ17I | GTATAC | 1 cut(s) | 504 |
| BtrI | CACGTC | 1 cut(s) | 238 |
| BtsCI | GGATG | 2 cut(s) | 255, 445 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 2 cut(s) | 111, 120 |
| Cac8I | GCNNGC | 1 cut(s) | 340 |
| Cfr13I | GGNCC | 1 cut(s) | 245 |
| CseI | GACGC | 1 cut(s) | 521 |
| Csp6I | GTAC | 1 cut(s) | 552 |
| CviAII | CATG | 2 cut(s) | 10, 507 |
| CviJI | RGCY | 8 cut(s) | 5, 46, 87, 94, 170, 276, 338, 560 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 46, 87, 94, 170, 276, 338, 560 |
| CviQI | GTAC | 1 cut(s) | 552 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| DpnI | GATC | 5 cut(s) | 144, 153, 321, 480, 540 |
| DpnII | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| Eam1104I | CTCTTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 177 |
| Eco32I | GATATC | 1 cut(s) | 15 |
| Eco47I | GGWCC | 1 cut(s) | 245 |
| Eco91I | GGTNACC | 1 cut(s) | 284 |
| EcoO65I | GGTNACC | 1 cut(s) | 284 |
| EcoRII | CCWGG | 1 cut(s) | 288 |
| EcoRV | GATATC | 1 cut(s) | 15 |
| EcoT22I | ATGCAT | 1 cut(s) | 445 |
| FaeI | CATG | 2 cut(s) | 13, 510 |
| FaiI | YATR | 5 cut(s) | 11, 178, 309, 504, 508 |
| FaqI | GGGAC | 1 cut(s) | 194 |
| FatI | CATG | 2 cut(s) | 9, 506 |
| FblI | GTMKAC | 2 cut(s) | 213, 503 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 489 |
| FokI | GGATG | 2 cut(s) | 242, 452 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 489 |
| FspBI | CTAG | 7 cut(s) | 18, 159, 389, 408, 473, 482, 536 |
| GluI | GCNGC | 2 cut(s) | 6, 489 |
| GsuI | CTGGAG | 2 cut(s) | 311, 540 |
| HapII | CCGG | 2 cut(s) | 29, 315 |
| HgaI | GACGC | 1 cut(s) | 521 |
| Hin1II | CATG | 2 cut(s) | 13, 510 |
| HincII | GTYRAC | 2 cut(s) | 302, 595 |
| HindII | GTYRAC | 2 cut(s) | 302, 595 |
| HindIII | AAGCTT | 1 cut(s) | 92 |
| HinfI | GANTC | 4 cut(s) | 73, 185, 385, 418 |
| HpaII | CCGG | 2 cut(s) | 29, 315 |
| HphI | GGTGA | 2 cut(s) | 82, 278 |
| Hpy166II | GTNNAC | 4 cut(s) | 214, 302, 504, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 159, 536, 585 |
| Hpy8I | GTNNAC | 4 cut(s) | 214, 302, 504, 595 |
| HpyAV | CCTTC | 3 cut(s) | 92, 187, 335 |
| HpyCH4III | ACNGT | 1 cut(s) | 106 |
| HpyCH4IV | ACGT | 2 cut(s) | 237, 304 |
| HpyCH4V | TGCA | 3 cut(s) | 233, 430, 443 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| HpySE526I | ACGT | 2 cut(s) | 237, 304 |
| Hsp92II | CATG | 2 cut(s) | 13, 510 |
| Kzo9I | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| LguI | GCTCTTC | 1 cut(s) | 177 |
| LmnI | GCTCC | 2 cut(s) | 485, 529 |
| LweI | GCATC | 3 cut(s) | 220, 430, 505 |
| MaeI | CTAG | 7 cut(s) | 18, 159, 389, 408, 473, 482, 536 |
| MaeII | ACGT | 2 cut(s) | 237, 304 |
| MaeIII | GTNAC | 3 cut(s) | 238, 284, 467 |
| MalI | GATC | 5 cut(s) | 144, 153, 321, 480, 540 |
| MbiI | CCGCTC | 1 cut(s) | 488 |
| MboI | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| MboII | GAAGA | 2 cut(s) | 164, 488 |
| MflI | RGATCY | 2 cut(s) | 319, 478 |
| MmeI | TCCRAC | 1 cut(s) | 441 |
| MnlI | CCTC | 3 cut(s) | 155, 244, 408 |
| Mph1103I | ATGCAT | 1 cut(s) | 445 |
| MspI | CCGG | 2 cut(s) | 29, 315 |
| MspR9I | CCNGG | 3 cut(s) | 29, 290, 316 |
| MvaI | CCWGG | 1 cut(s) | 290 |
| NciI | CCSGG | 2 cut(s) | 29, 316 |
| NdeII | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| NlaIII | CATG | 2 cut(s) | 13, 510 |
| NmuCI | GTSAC | 2 cut(s) | 238, 284 |
| NsiI | ATGCAT | 1 cut(s) | 445 |
| PciSI | GCTCTTC | 1 cut(s) | 177 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 151 |
| PfeI | GAWTC | 4 cut(s) | 73, 185, 385, 418 |
| PkrI | GCNGC | 2 cut(s) | 7, 490 |
| Psp6I | CCWGG | 1 cut(s) | 288 |
| PspEI | GGTNACC | 1 cut(s) | 284 |
| PspGI | CCWGG | 1 cut(s) | 288 |
| PspPI | GGNCC | 1 cut(s) | 245 |
| PsuI | RGATCY | 2 cut(s) | 319, 478 |
| RsaI | GTAC | 1 cut(s) | 553 |
| RsaNI | GTAC | 1 cut(s) | 552 |
| SapI | GCTCTTC | 1 cut(s) | 177 |
| SatI | GCNGC | 2 cut(s) | 6, 489 |
| Sau3AI | GATC | 5 cut(s) | 142, 151, 319, 478, 538 |
| Sau96I | GGNCC | 1 cut(s) | 245 |
| ScaI | AGTACT | 1 cut(s) | 553 |
| ScrFI | CCNGG | 3 cut(s) | 29, 290, 316 |
| SfaNI | GCATC | 3 cut(s) | 220, 430, 505 |
| SinI | GGWCC | 1 cut(s) | 245 |
| SsiI | CCGC | 1 cut(s) | 488 |
| SspI | AATATT | 1 cut(s) | 130 |
| SspMI | CTAG | 7 cut(s) | 18, 159, 389, 408, 473, 482, 536 |
| StyD4I | CCNGG | 3 cut(s) | 27, 288, 314 |
| TaaI | ACNGT | 1 cut(s) | 106 |
| TaiI | ACGT | 2 cut(s) | 240, 307 |
| TaqI | TCGA | 2 cut(s) | 145, 584 |
| TatI | WGTACW | 1 cut(s) | 551 |
| TauI | GCSGC | 1 cut(s) | 491 |
| TfiI | GAWTC | 4 cut(s) | 73, 185, 385, 418 |
| TscAI | CASTG | 2 cut(s) | 111, 120 |
| TseFI | GTSAC | 2 cut(s) | 238, 284 |
| TseI | GCWGC | 1 cut(s) | 5 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 284 |
| TspDTI | ATGAA | 1 cut(s) | 214 |
| TspRI | CASTG | 2 cut(s) | 111, 120 |
| VpaK11BI | GGWCC | 1 cut(s) | 245 |
| XbaI | TCTAGA | 2 cut(s) | 158, 535 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 354 |
| XmiI | GTMKAC | 2 cut(s) | 213, 503 |
| XspI | CTAG | 7 cut(s) | 18, 159, 389, 408, 473, 482, 536 |
| ZrmI | AGTACT | 1 cut(s) | 553 |
| Zsp2I | ATGCAT | 1 cut(s) | 445 |