ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 727 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 668 |
| Acc36I | ACCTGC | 1 cut(s) | 727 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 541 |
| AccI | GTMKAC | 1 cut(s) | 660 |
| AccIII | TCCGGA | 1 cut(s) | 591 |
| AclWI | GGATC | 1 cut(s) | 624 |
| AfaI | GTAC | 1 cut(s) | 418 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 195, 209, 272, 273, 448, 541, 591, 639 |
| AjnI | CCWGG | 1 cut(s) | 632 |
| AluBI | AGCT | 3 cut(s) | 262, 700, 733 |
| AluI | AGCT | 3 cut(s) | 262, 700, 733 |
| Alw26I | GTCTC | 2 cut(s) | 532, 561 |
| AlwI | GGATC | 1 cut(s) | 624 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 541 |
| Aor13HI | TCCGGA | 1 cut(s) | 591 |
| AoxI | GGCC | 2 cut(s) | 581, 675 |
| ApeKI | GCWGC | 2 cut(s) | 262, 733 |
| AspS9I | GGNCC | 1 cut(s) | 582 |
| AsuHPI | GGTGA | 1 cut(s) | 751 |
| BbvI | GCAGC | 2 cut(s) | 249, 720 |
| BciT130I | CCWGG | 1 cut(s) | 634 |
| BciVI | GTATCC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 2 cut(s) | 532, 561 |
| BfaI | CTAG | 1 cut(s) | 80 |
| BfmI | CTRYAG | 1 cut(s) | 734 |
| BfuAI | ACCTGC | 1 cut(s) | 727 |
| BfuI | GTATCC | 1 cut(s) | 95 |
| BisI | GCNGC | 2 cut(s) | 263, 734 |
| BlsI | GCNGC | 2 cut(s) | 264, 735 |
| Bme1390I | CCNGG | 1 cut(s) | 634 |
| BmgT120I | GGNCC | 1 cut(s) | 582 |
| BmrFI | CCNGG | 1 cut(s) | 634 |
| BpmI | CTGGAG | 1 cut(s) | 635 |
| BpuEI | CTTGAG | 1 cut(s) | 344 |
| BsaJI | CCNNGG | 1 cut(s) | 325 |
| BsaWI | WCCGGW | 1 cut(s) | 591 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 195, 209, 272, 273, 448, 541, 591, 639 |
| Bse1I | ACTGG | 1 cut(s) | 546 |
| BseAI | TCCGGA | 1 cut(s) | 591 |
| BseBI | CCWGG | 1 cut(s) | 634 |
| BseDI | CCNNGG | 1 cut(s) | 325 |
| BseGI | GGATG | 1 cut(s) | 523 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 195, 209, 272, 273, 448, 541, 591, 639 |
| BseNI | ACTGG | 1 cut(s) | 546 |
| BseRI | GAGGAG | 6 cut(s) | 41, 44, 47, 73, 249, 610 |
| BseXI | GCAGC | 2 cut(s) | 249, 720 |
| BseYI | CCCAGC | 1 cut(s) | 763 |
| Bsh1285I | CGRYCG | 1 cut(s) | 449 |
| BshFI | GGCC | 2 cut(s) | 583, 677 |
| BsiEI | CGRYCG | 1 cut(s) | 449 |
| BsiSI | CCGG | 2 cut(s) | 592, 693 |
| BslFI | GGGAC | 1 cut(s) | 468 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 195, 209, 272, 273, 448, 541, 591, 639 |
| BsmAI | GTCTC | 2 cut(s) | 532, 561 |
| BsmFI | GGGAC | 1 cut(s) | 468 |
| BsnI | GGCC | 2 cut(s) | 583, 677 |
| Bsp13I | TCCGGA | 1 cut(s) | 591 |
| Bsp143I | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| BspANI | GGCC | 2 cut(s) | 583, 677 |
| BspEI | TCCGGA | 1 cut(s) | 591 |
| BspMAI | CTGCAG | 1 cut(s) | 738 |
| BspMI | ACCTGC | 1 cut(s) | 727 |
| BspPI | GGATC | 1 cut(s) | 624 |
| BsrI | ACTGG | 1 cut(s) | 546 |
| BssECI | CCNNGG | 1 cut(s) | 325 |
| BssMI | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| BssT1I | CCWWGG | 1 cut(s) | 325 |
| Bst2UI | CCWGG | 1 cut(s) | 634 |
| Bst4CI | ACNGT | 1 cut(s) | 712 |
| BstC8I | GCNNGC | 1 cut(s) | 698 |
| BstF5I | GGATG | 1 cut(s) | 523 |
| BstKTI | GATC | 5 cut(s) | 449, 481, 528, 577, 632 |
| BstMAI | GTCTC | 2 cut(s) | 532, 561 |
| BstMBI | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| BstMCI | CGRYCG | 1 cut(s) | 449 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 764 |
| BstNI | CCWGG | 1 cut(s) | 634 |
| BstSCI | CCNGG | 1 cut(s) | 632 |
| BstSFI | CTRYAG | 1 cut(s) | 734 |
| BstV1I | GCAGC | 2 cut(s) | 249, 720 |
| BstX2I | RGATCY | 1 cut(s) | 629 |
| BstYI | RGATCY | 1 cut(s) | 629 |
| BsuI | GTATCC | 1 cut(s) | 95 |
| BsuRI | GGCC | 2 cut(s) | 583, 677 |
| BtgZI | GCGATG | 1 cut(s) | 451 |
| BtsCI | GGATG | 1 cut(s) | 523 |
| BveI | ACCTGC | 1 cut(s) | 727 |
| Cac8I | GCNNGC | 1 cut(s) | 698 |
| CaiI | CAGNNNCTG | 1 cut(s) | 541 |
| Cfr13I | GGNCC | 1 cut(s) | 582 |
| Csp6I | GTAC | 1 cut(s) | 417 |
| CviAII | CATG | 4 cut(s) | 301, 353, 553, 752 |
| CviJI | RGCY | 6 cut(s) | 262, 583, 613, 677, 700, 733 |
| CviKI_1 | RGCY | 6 cut(s) | 262, 583, 613, 677, 700, 733 |
| CviQI | GTAC | 1 cut(s) | 417 |
| DpnI | GATC | 5 cut(s) | 448, 480, 527, 576, 631 |
| DpnII | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 668 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 668 |
| Eco130I | CCWWGG | 1 cut(s) | 325 |
| Eco32I | GATATC | 1 cut(s) | 744 |
| EcoRII | CCWGG | 1 cut(s) | 632 |
| EcoRV | GATATC | 1 cut(s) | 744 |
| EcoT14I | CCWWGG | 1 cut(s) | 325 |
| ErhI | CCWWGG | 1 cut(s) | 325 |
| FaeI | CATG | 4 cut(s) | 304, 356, 556, 755 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 374, 406 |
| FaqI | GGGAC | 1 cut(s) | 468 |
| FatI | CATG | 4 cut(s) | 300, 352, 552, 751 |
| FauNDI | CATATG | 1 cut(s) | 680 |
| FblI | GTMKAC | 1 cut(s) | 660 |
| Fnu4HI | GCNGC | 2 cut(s) | 263, 734 |
| FokI | GGATG | 1 cut(s) | 530 |
| Fsp4HI | GCNGC | 2 cut(s) | 263, 734 |
| FspBI | CTAG | 1 cut(s) | 80 |
| GluI | GCNGC | 2 cut(s) | 263, 734 |
| GsaI | CCCAGC | 1 cut(s) | 767 |
| GsuI | CTGGAG | 1 cut(s) | 635 |
| HaeIII | GGCC | 2 cut(s) | 583, 677 |
| HapII | CCGG | 2 cut(s) | 592, 693 |
| Hin1II | CATG | 4 cut(s) | 304, 356, 556, 755 |
| HincII | GTYRAC | 2 cut(s) | 547, 661 |
| HindII | GTYRAC | 2 cut(s) | 547, 661 |
| HindIII | AAGCTT | 1 cut(s) | 698 |
| HinfI | GANTC | 3 cut(s) | 370, 521, 669 |
| HpaII | CCGG | 2 cut(s) | 592, 693 |
| HphI | GGTGA | 1 cut(s) | 751 |
| Hpy166II | GTNNAC | 3 cut(s) | 337, 547, 661 |
| Hpy188I | TCNGA | 4 cut(s) | 204, 312, 375, 668 |
| Hpy188III | TCNNGA | 3 cut(s) | 535, 592, 653 |
| Hpy8I | GTNNAC | 3 cut(s) | 337, 547, 661 |
| HpyCH4III | ACNGT | 1 cut(s) | 712 |
| HpyCH4V | TGCA | 3 cut(s) | 506, 684, 736 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 764 |
| Hsp92II | CATG | 4 cut(s) | 304, 356, 556, 755 |
| Kpn2I | TCCGGA | 1 cut(s) | 591 |
| Kzo9I | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| LmnI | GCTCC | 2 cut(s) | 730, 755 |
| Lsp1109I | GCAGC | 2 cut(s) | 249, 720 |
| MaeI | CTAG | 1 cut(s) | 80 |
| MalI | GATC | 5 cut(s) | 448, 480, 527, 576, 631 |
| MboI | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| MflI | RGATCY | 1 cut(s) | 629 |
| MluCI | AATT | 4 cut(s) | 304, 319, 637, 714 |
| MlyI | GAGTC | 1 cut(s) | 678 |
| MroI | TCCGGA | 1 cut(s) | 591 |
| MseI | TTAA | 3 cut(s) | 281, 402, 623 |
| MslI | CAYNNNNRTG | 1 cut(s) | 511 |
| MspI | CCGG | 2 cut(s) | 592, 693 |
| MspR9I | CCNGG | 1 cut(s) | 634 |
| MvaI | CCWGG | 1 cut(s) | 634 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 764 |
| NdeI | CATATG | 1 cut(s) | 680 |
| NdeII | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| NlaIII | CATG | 4 cut(s) | 304, 356, 556, 755 |
| PaqCI | CACCTGC | 1 cut(s) | 727 |
| PfeI | GAWTC | 2 cut(s) | 370, 521 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 541 |
| PfoI | TCCNGGA | 1 cut(s) | 632 |
| PkrI | GCNGC | 2 cut(s) | 264, 735 |
| Ple19I | CGATCG | 1 cut(s) | 449 |
| PleI | GAGTC | 1 cut(s) | 677 |
| PpsI | GAGTC | 1 cut(s) | 677 |
| Psp6I | CCWGG | 1 cut(s) | 632 |
| PspFI | CCCAGC | 1 cut(s) | 763 |
| PspGI | CCWGG | 1 cut(s) | 632 |
| PspPI | GGNCC | 1 cut(s) | 582 |
| PstI | CTGCAG | 1 cut(s) | 738 |
| PstNI | CAGNNNCTG | 1 cut(s) | 541 |
| PsuI | RGATCY | 1 cut(s) | 629 |
| PvuI | CGATCG | 1 cut(s) | 449 |
| RsaI | GTAC | 1 cut(s) | 418 |
| RsaNI | GTAC | 1 cut(s) | 417 |
| RseI | CAYNNNNRTG | 1 cut(s) | 511 |
| SalI | GTCGAC | 1 cut(s) | 659 |
| SaqAI | TTAA | 3 cut(s) | 281, 402, 623 |
| SatI | GCNGC | 2 cut(s) | 263, 734 |
| Sau3AI | GATC | 5 cut(s) | 446, 478, 525, 574, 629 |
| Sau96I | GGNCC | 1 cut(s) | 582 |
| SchI | GAGTC | 1 cut(s) | 678 |
| ScrFI | CCNGG | 1 cut(s) | 634 |
| SfcI | CTRYAG | 1 cut(s) | 734 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 511 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 4 cut(s) | 304, 319, 637, 714 |
| SspMI | CTAG | 1 cut(s) | 80 |
| StyD4I | CCNGG | 1 cut(s) | 632 |
| StyI | CCWWGG | 1 cut(s) | 325 |
| TaaI | ACNGT | 1 cut(s) | 712 |
| TaqI | TCGA | 3 cut(s) | 445, 524, 660 |
| TasI | AATT | 4 cut(s) | 304, 319, 637, 714 |
| TfiI | GAWTC | 2 cut(s) | 370, 521 |
| Tru1I | TTAA | 3 cut(s) | 281, 402, 623 |
| Tru9I | TTAA | 3 cut(s) | 281, 402, 623 |
| TseI | GCWGC | 2 cut(s) | 262, 733 |
| TspDTI | ATGAA | 3 cut(s) | 35, 317, 420 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 541 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 777 |
| XmiI | GTMKAC | 1 cut(s) | 660 |
| XspI | CTAG | 1 cut(s) | 80 |