Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 399 |
| AcoI | YGGCCR | 1 cut(s) | 420 |
| AcsI | RAATTY | 2 cut(s) | 572, 599 |
| AdeI | CACNNNGTG | 1 cut(s) | 62 |
| AfaI | GTAC | 3 cut(s) | 249, 325, 607 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 388 |
| AgsI | TTSAA | 4 cut(s) | 132, 377, 433, 568 |
| AhlI | ACTAGT | 1 cut(s) | 121 |
| AluBI | AGCT | 1 cut(s) | 701 |
| AluI | AGCT | 1 cut(s) | 701 |
| Alw26I | GTCTC | 3 cut(s) | 264, 290, 660 |
| AlwI | GGATC | 1 cut(s) | 399 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 668 |
| AoxI | GGCC | 2 cut(s) | 420, 466 |
| ApoI | RAATTY | 2 cut(s) | 572, 599 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 352, 384 |
| AspLEI | GCGC | 1 cut(s) | 96 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AsuHPI | GGTGA | 2 cut(s) | 427, 437 |
| BccI | CCATC | 1 cut(s) | 412 |
| BciVI | GTATCC | 1 cut(s) | 26 |
| BclI | TGATCA | 1 cut(s) | 670 |
| BcoDI | GTCTC | 3 cut(s) | 264, 290, 660 |
| BcuI | ACTAGT | 1 cut(s) | 121 |
| BfaI | CTAG | 3 cut(s) | 20, 122, 383 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BfoI | RGCGCY | 1 cut(s) | 97 |
| BfuI | GTATCC | 1 cut(s) | 26 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BmrI | ACTGGG | 1 cut(s) | 250 |
| BmuI | ACTGGG | 1 cut(s) | 250 |
| BsaBI | GATNNNNATC | 1 cut(s) | 675 |
| BsaJI | CCNNGG | 1 cut(s) | 410 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 185, 215 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 388 |
| Bse118I | RCCGGY | 1 cut(s) | 422 |
| Bse1I | ACTGG | 1 cut(s) | 256 |
| Bse8I | GATNNNNATC | 1 cut(s) | 675 |
| BseDI | CCNNGG | 1 cut(s) | 410 |
| BseJI | GATNNNNATC | 1 cut(s) | 675 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BseNI | ACTGG | 1 cut(s) | 256 |
| BshFI | GGCC | 2 cut(s) | 422, 468 |
| BsiSI | CCGG | 1 cut(s) | 423 |
| BslFI | GGGAC | 1 cut(s) | 222 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 388 |
| BsmAI | GTCTC | 3 cut(s) | 264, 290, 660 |
| BsmFI | GGGAC | 1 cut(s) | 222 |
| BsnI | GGCC | 2 cut(s) | 422, 468 |
| Bsp1407I | TGTACA | 2 cut(s) | 247, 605 |
| Bsp143I | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| BspANI | GGCC | 2 cut(s) | 422, 468 |
| BspMAI | CTGCAG | 1 cut(s) | 35 |
| BspPI | GGATC | 1 cut(s) | 399 |
| BsrFI | RCCGGY | 1 cut(s) | 422 |
| BsrGI | TGTACA | 2 cut(s) | 247, 605 |
| BsrI | ACTGG | 1 cut(s) | 256 |
| BssAI | RCCGGY | 1 cut(s) | 422 |
| BssECI | CCNNGG | 1 cut(s) | 410 |
| BssMI | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| Bst4CI | ACNGT | 2 cut(s) | 60, 411 |
| Bst6I | CTCTTC | 2 cut(s) | 342, 632 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 180 |
| BstAUI | TGTACA | 2 cut(s) | 247, 605 |
| BstDSI | CCRYGG | 1 cut(s) | 410 |
| BstH2I | RGCGCY | 1 cut(s) | 97 |
| BstHHI | GCGC | 1 cut(s) | 96 |
| BstKTI | GATC | 5 cut(s) | 105, 394, 595, 673, 690 |
| BstMAI | GTCTC | 3 cut(s) | 264, 290, 660 |
| BstMBI | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 180, 338, 491 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BsuI | GTATCC | 1 cut(s) | 26 |
| BsuRI | GGCC | 2 cut(s) | 422, 468 |
| BtgI | CCRYGG | 1 cut(s) | 410 |
| BtsI | GCAGTG | 1 cut(s) | 393 |
| BtsIMutI | CAGTG | 2 cut(s) | 65, 393 |
| CaiI | CAGNNNCTG | 1 cut(s) | 668 |
| CfoI | GCGC | 1 cut(s) | 96 |
| Cfr10I | RCCGGY | 1 cut(s) | 422 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| Csp6I | GTAC | 3 cut(s) | 248, 324, 606 |
| CviAII | CATG | 3 cut(s) | 8, 83, 239 |
| CviJI | RGCY | 7 cut(s) | 113, 160, 368, 422, 452, 468, 701 |
| CviKI_1 | RGCY | 7 cut(s) | 113, 160, 368, 422, 452, 468, 701 |
| CviQI | GTAC | 3 cut(s) | 248, 324, 606 |
| DpnI | GATC | 5 cut(s) | 104, 393, 594, 672, 689 |
| DpnII | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| DraIII | CACNNNGTG | 1 cut(s) | 62 |
| EaeI | YGGCCR | 1 cut(s) | 420 |
| Eam1104I | CTCTTC | 2 cut(s) | 342, 632 |
| EarI | CTCTTC | 2 cut(s) | 342, 632 |
| FaeI | CATG | 3 cut(s) | 11, 86, 242 |
| FaqI | GGGAC | 1 cut(s) | 222 |
| FatI | CATG | 3 cut(s) | 7, 82, 238 |
| FbaI | TGATCA | 1 cut(s) | 670 |
| FspBI | CTAG | 3 cut(s) | 20, 122, 383 |
| GlaI | GCGC | 1 cut(s) | 95 |
| HaeII | RGCGCY | 1 cut(s) | 97 |
| HaeIII | GGCC | 2 cut(s) | 422, 468 |
| HapII | CCGG | 1 cut(s) | 423 |
| HhaI | GCGC | 1 cut(s) | 96 |
| Hin1II | CATG | 3 cut(s) | 11, 86, 242 |
| Hin6I | GCGC | 1 cut(s) | 94 |
| HinP1I | GCGC | 1 cut(s) | 94 |
| HincII | GTYRAC | 1 cut(s) | 46 |
| HindII | GTYRAC | 1 cut(s) | 46 |
| HinfI | GANTC | 3 cut(s) | 143, 200, 665 |
| HpaII | CCGG | 1 cut(s) | 423 |
| HphI | GGTGA | 2 cut(s) | 427, 437 |
| Hpy166II | GTNNAC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 3 cut(s) | 232, 664, 670 |
| Hpy8I | GTNNAC | 1 cut(s) | 46 |
| HpyCH4III | ACNGT | 2 cut(s) | 60, 411 |
| HpyCH4IV | ACGT | 2 cut(s) | 234, 611 |
| HpyCH4V | TGCA | 5 cut(s) | 33, 65, 341, 479, 521 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 180, 338, 491 |
| HpySE526I | ACGT | 2 cut(s) | 234, 611 |
| Hsp92II | CATG | 3 cut(s) | 11, 86, 242 |
| HspAI | GCGC | 1 cut(s) | 94 |
| Ksp22I | TGATCA | 1 cut(s) | 670 |
| Kzo9I | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| LpnPI | CCDG | 4 cut(s) | 191, 269, 436, 447 |
| MaeI | CTAG | 3 cut(s) | 20, 122, 383 |
| MaeII | ACGT | 2 cut(s) | 234, 611 |
| MaeIII | GTNAC | 4 cut(s) | 3, 124, 201, 503 |
| MalI | GATC | 5 cut(s) | 104, 393, 594, 672, 689 |
| MboI | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| MboII | GAAGA | 2 cut(s) | 359, 619 |
| MluCI | AATT | 4 cut(s) | 497, 572, 599, 649 |
| MlyI | GAGTC | 3 cut(s) | 137, 209, 659 |
| MnlI | CCTC | 8 cut(s) | 29, 59, 274, 345, 480, 635, 685, 690 |
| MseI | TTAA | 1 cut(s) | 703 |
| MslI | CAYNNNNRTG | 2 cut(s) | 243, 273 |
| MspI | CCGG | 1 cut(s) | 423 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 180, 338, 491 |
| NdeII | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| NlaIII | CATG | 3 cut(s) | 11, 86, 242 |
| NmuCI | GTSAC | 2 cut(s) | 124, 201 |
| PleI | GAGTC | 3 cut(s) | 137, 208, 659 |
| PpsI | GAGTC | 3 cut(s) | 137, 208, 659 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PstI | CTGCAG | 1 cut(s) | 35 |
| PstNI | CAGNNNCTG | 1 cut(s) | 668 |
| RsaI | GTAC | 3 cut(s) | 249, 325, 607 |
| RsaNI | GTAC | 3 cut(s) | 248, 324, 606 |
| RseI | CAYNNNNRTG | 2 cut(s) | 243, 273 |
| SaqAI | TTAA | 1 cut(s) | 703 |
| Sau3AI | GATC | 5 cut(s) | 102, 391, 592, 670, 687 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| SchI | GAGTC | 3 cut(s) | 137, 209, 659 |
| SetI | ASST | 8 cut(s) | 40, 51, 237, 285, 614, 627, 696, 703 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 243, 273 |
| SpeI | ACTAGT | 1 cut(s) | 121 |
| Sse9I | AATT | 4 cut(s) | 497, 572, 599, 649 |
| SspMI | CTAG | 3 cut(s) | 20, 122, 383 |
| TaaI | ACNGT | 2 cut(s) | 60, 411 |
| TaiI | ACGT | 2 cut(s) | 237, 614 |
| TaqI | TCGA | 2 cut(s) | 553, 690 |
| TasI | AATT | 4 cut(s) | 497, 572, 599, 649 |
| TatI | WGTACW | 2 cut(s) | 247, 605 |
| Tru1I | TTAA | 1 cut(s) | 703 |
| Tru9I | TTAA | 1 cut(s) | 703 |
| TscAI | CASTG | 2 cut(s) | 65, 393 |
| TseFI | GTSAC | 2 cut(s) | 124, 201 |
| Tsp45I | GTSAC | 2 cut(s) | 124, 201 |
| TspDTI | ATGAA | 2 cut(s) | 71, 227 |
| TspGWI | ACGGA | 1 cut(s) | 491 |
| TspRI | CASTG | 2 cut(s) | 65, 393 |
| XapI | RAATTY | 2 cut(s) | 572, 599 |
| XspI | CTAG | 3 cut(s) | 20, 122, 383 |