Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 322, 472 |
| AcsI | RAATTY | 1 cut(s) | 376 |
| AfaI | GTAC | 1 cut(s) | 416 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 168, 328, 395 |
| AgsI | TTSAA | 1 cut(s) | 16 |
| AjnI | CCWGG | 1 cut(s) | 143 |
| AluBI | AGCT | 1 cut(s) | 447 |
| AluI | AGCT | 1 cut(s) | 447 |
| Alw26I | GTCTC | 2 cut(s) | 83, 387 |
| ApoI | RAATTY | 1 cut(s) | 376 |
| BceAI | ACGGC | 1 cut(s) | 120 |
| BciT130I | CCWGG | 1 cut(s) | 145 |
| BcoDI | GTCTC | 2 cut(s) | 83, 387 |
| BfaI | CTAG | 2 cut(s) | 57, 475 |
| BglII | AGATCT | 1 cut(s) | 409 |
| Bme1390I | CCNGG | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 134 |
| BmrFI | CCNGG | 1 cut(s) | 145 |
| BmsI | GCATC | 1 cut(s) | 368 |
| BoxI | GACNNNNGTC | 1 cut(s) | 258 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 446 |
| BsaJI | CCNNGG | 1 cut(s) | 162 |
| BsaWI | WCCGGW | 1 cut(s) | 213 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 168, 328, 395 |
| Bse3DI | GCAATG | 1 cut(s) | 37 |
| BseBI | CCWGG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 168, 328, 395 |
| BseMI | GCAATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 1 cut(s) | 237 |
| BseRI | GAGGAG | 1 cut(s) | 344 |
| BsgI | GTGCAG | 1 cut(s) | 51 |
| BsiSI | CCGG | 1 cut(s) | 214 |
| BslFI | GGGAC | 1 cut(s) | 23 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 168, 328, 395 |
| BsmAI | GTCTC | 2 cut(s) | 83, 387 |
| BsmFI | GGGAC | 1 cut(s) | 23 |
| Bsp143I | GATC | 2 cut(s) | 305, 409 |
| BspACI | CCGC | 2 cut(s) | 322, 472 |
| BspCNI | CTCAG | 1 cut(s) | 238 |
| BspLI | GGNNCC | 1 cut(s) | 134 |
| BsrDI | GCAATG | 1 cut(s) | 37 |
| BssECI | CCNNGG | 1 cut(s) | 162 |
| BssMI | GATC | 2 cut(s) | 305, 409 |
| BssT1I | CCWWGG | 1 cut(s) | 162 |
| Bst2UI | CCWGG | 1 cut(s) | 145 |
| Bst4CI | ACNGT | 1 cut(s) | 260 |
| BstDEI | CTNAG | 2 cut(s) | 236, 246 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 393 |
| BstKTI | GATC | 2 cut(s) | 308, 412 |
| BstMAI | GTCTC | 2 cut(s) | 83, 387 |
| BstMBI | GATC | 2 cut(s) | 305, 409 |
| BstNI | CCWGG | 1 cut(s) | 145 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 258 |
| BstSCI | CCNGG | 1 cut(s) | 143 |
| BstX2I | RGATCY | 1 cut(s) | 409 |
| BstYI | RGATCY | 1 cut(s) | 409 |
| BtsIMutI | CAGTG | 1 cut(s) | 256 |
| CsiI | ACCWGGT | 1 cut(s) | 143 |
| Csp6I | GTAC | 1 cut(s) | 415 |
| CviAII | CATG | 3 cut(s) | 178, 198, 422 |
| CviJI | RGCY | 4 cut(s) | 135, 182, 447, 457 |
| CviKI_1 | RGCY | 4 cut(s) | 135, 182, 447, 457 |
| CviQI | GTAC | 1 cut(s) | 415 |
| DdeI | CTNAG | 2 cut(s) | 236, 246 |
| DpnI | GATC | 2 cut(s) | 307, 411 |
| DpnII | GATC | 2 cut(s) | 305, 409 |
| Eco130I | CCWWGG | 1 cut(s) | 162 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 393 |
| EcoRII | CCWGG | 1 cut(s) | 143 |
| EcoT14I | CCWWGG | 1 cut(s) | 162 |
| ErhI | CCWWGG | 1 cut(s) | 162 |
| FaeI | CATG | 3 cut(s) | 181, 201, 425 |
| FaqI | GGGAC | 1 cut(s) | 23 |
| FatI | CATG | 3 cut(s) | 177, 197, 421 |
| FspBI | CTAG | 2 cut(s) | 57, 475 |
| HapII | CCGG | 1 cut(s) | 214 |
| Hin1II | CATG | 3 cut(s) | 181, 201, 425 |
| HinfI | GANTC | 3 cut(s) | 81, 248, 318 |
| HpaII | CCGG | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 4 cut(s) | 86, 247, 253, 302 |
| Hpy188III | TCNNGA | 1 cut(s) | 45 |
| HpyAV | CCTTC | 2 cut(s) | 252, 277 |
| HpyCH4III | ACNGT | 1 cut(s) | 260 |
| HpyCH4V | TGCA | 3 cut(s) | 30, 68, 359 |
| HpyF3I | CTNAG | 2 cut(s) | 236, 246 |
| Hsp92II | CATG | 3 cut(s) | 181, 201, 425 |
| Kzo9I | GATC | 2 cut(s) | 305, 409 |
| LmnI | GCTCC | 1 cut(s) | 132 |
| LpnPI | CCDG | 6 cut(s) | 30, 130, 157, 227, 254, 381 |
| LweI | GCATC | 1 cut(s) | 368 |
| MabI | ACCWGGT | 1 cut(s) | 143 |
| MaeI | CTAG | 2 cut(s) | 57, 475 |
| MaeIII | GTNAC | 2 cut(s) | 203, 229 |
| MalI | GATC | 2 cut(s) | 307, 411 |
| MboI | GATC | 2 cut(s) | 305, 409 |
| MboII | GAAGA | 2 cut(s) | 90, 315 |
| MflI | RGATCY | 1 cut(s) | 409 |
| MluCI | AATT | 4 cut(s) | 100, 208, 376, 441 |
| MlyI | GAGTC | 1 cut(s) | 257 |
| MmeI | TCCRAC | 1 cut(s) | 394 |
| MnlI | CCTC | 3 cut(s) | 41, 322, 399 |
| MspI | CCGG | 1 cut(s) | 214 |
| MspR9I | CCNGG | 1 cut(s) | 145 |
| MvaI | CCWGG | 1 cut(s) | 145 |
| NdeII | GATC | 2 cut(s) | 305, 409 |
| NlaIII | CATG | 3 cut(s) | 181, 201, 425 |
| NlaIV | GGNNCC | 1 cut(s) | 134 |
| PfeI | GAWTC | 2 cut(s) | 81, 318 |
| PleI | GAGTC | 1 cut(s) | 256 |
| PpsI | GAGTC | 1 cut(s) | 256 |
| PshAI | GACNNNNGTC | 1 cut(s) | 258 |
| Psp6I | CCWGG | 1 cut(s) | 143 |
| PspGI | CCWGG | 1 cut(s) | 143 |
| PspN4I | GGNNCC | 1 cut(s) | 134 |
| PsuI | RGATCY | 1 cut(s) | 409 |
| RsaI | GTAC | 1 cut(s) | 416 |
| RsaNI | GTAC | 1 cut(s) | 415 |
| Sau3AI | GATC | 2 cut(s) | 305, 409 |
| SchI | GAGTC | 1 cut(s) | 257 |
| ScrFI | CCNGG | 1 cut(s) | 145 |
| SetI | ASST | 6 cut(s) | 146, 173, 391, 400, 420, 449 |
| SexAI | ACCWGGT | 1 cut(s) | 143 |
| SfaNI | GCATC | 1 cut(s) | 368 |
| Sse9I | AATT | 4 cut(s) | 100, 208, 376, 441 |
| SsiI | CCGC | 2 cut(s) | 322, 472 |
| SspMI | CTAG | 2 cut(s) | 57, 475 |
| StyD4I | CCNGG | 1 cut(s) | 143 |
| StyI | CCWWGG | 1 cut(s) | 162 |
| TaaI | ACNGT | 1 cut(s) | 260 |
| TasI | AATT | 4 cut(s) | 100, 208, 376, 441 |
| TfiI | GAWTC | 2 cut(s) | 81, 318 |
| TscAI | CASTG | 1 cut(s) | 263 |
| TspDTI | ATGAA | 1 cut(s) | 186 |
| TspRI | CASTG | 1 cut(s) | 263 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 393 |
| XapI | RAATTY | 1 cut(s) | 376 |
| XspI | CTAG | 2 cut(s) | 57, 475 |