ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transferase | PF02458 | 1 - 437 | 6.6e-74 | Transferase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 269 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1334 |
| AccII | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| AccIII | TCCGGA | 1 cut(s) | 369 |
| AciI | CCGC | 7 cut(s) | 102, 229, 266, 435, 528, 854, 924 |
| AclI | AACGTT | 1 cut(s) | 723 |
| AclWI | GGATC | 3 cut(s) | 390, 587, 1181 |
| AcoI | YGGCCR | 1 cut(s) | 226 |
| AcsI | RAATTY | 1 cut(s) | 862 |
| AcuI | CTGAAG | 1 cut(s) | 38 |
| AcvI | CACGTG | 1 cut(s) | 740 |
| AfaI | GTAC | 2 cut(s) | 549, 808 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 224, 1334 |
| AflII | CTTAAG | 1 cut(s) | 317 |
| AflIII | ACRYGT | 2 cut(s) | 737, 739 |
| AgsI | TTSAA | 4 cut(s) | 181, 326, 660, 1253 |
| AhlI | ACTAGT | 1 cut(s) | 755 |
| AjnI | CCWGG | 1 cut(s) | 1333 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 889, 921 |
| AleI | CACNNNNGTG | 1 cut(s) | 740 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 483, 515 |
| AluBI | AGCT | 9 cut(s) | 94, 322, 337, 533, 630, 920, 1072, 1122, 1131 |
| AluI | AGCT | 9 cut(s) | 94, 322, 337, 533, 630, 920, 1072, 1122, 1131 |
| Alw21I | GWGCWC | 1 cut(s) | 535 |
| Alw26I | GTCTC | 4 cut(s) | 191, 468, 844, 1225 |
| AlwI | GGATC | 3 cut(s) | 390, 587, 1181 |
| Ama87I | CYCGRG | 1 cut(s) | 288 |
| Aor13HI | TCCGGA | 1 cut(s) | 369 |
| AoxI | GGCC | 2 cut(s) | 226, 912 |
| ApeKI | GCWGC | 3 cut(s) | 337, 782, 920 |
| ApoI | RAATTY | 1 cut(s) | 862 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 276, 308 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 723, 862, 1051 |
| AspS9I | GGNCC | 2 cut(s) | 912, 1196 |
| AsuHPI | GGTGA | 3 cut(s) | 804, 1040, 1273 |
| AsuNHI | GCTAGC | 1 cut(s) | 1127 |
| AvaI | CYCGRG | 1 cut(s) | 288 |
| AvaII | GGWCC | 1 cut(s) | 1196 |
| BaeGI | GKGCMC | 1 cut(s) | 796 |
| BanII | GRGCYC | 1 cut(s) | 535 |
| BbrPI | CACGTG | 1 cut(s) | 740 |
| BbsI | GAAGAC | 1 cut(s) | 188 |
| Bbv12I | GWGCWC | 1 cut(s) | 535 |
| BbvI | GCAGC | 3 cut(s) | 324, 769, 907 |
| BccI | CCATC | 3 cut(s) | 46, 473, 1028 |
| BceAI | ACGGC | 1 cut(s) | 899 |
| BciT130I | CCWGG | 1 cut(s) | 1335 |
| BciVI | GTATCC | 3 cut(s) | 478, 485, 874 |
| BcoDI | GTCTC | 4 cut(s) | 191, 468, 844, 1225 |
| BcuI | ACTAGT | 1 cut(s) | 755 |
| BfaI | CTAG | 3 cut(s) | 756, 789, 1128 |
| BfrI | CTTAAG | 1 cut(s) | 317 |
| BfuI | GTATCC | 3 cut(s) | 478, 485, 874 |
| BglII | AGATCT | 1 cut(s) | 391 |
| BisI | GCNGC | 5 cut(s) | 229, 338, 783, 921, 924 |
| BlsI | GCNGC | 5 cut(s) | 230, 339, 784, 922, 925 |
| Bme1390I | CCNGG | 1 cut(s) | 1335 |
| Bme18I | GGWCC | 1 cut(s) | 1196 |
| BmeT110I | CYCGRG | 1 cut(s) | 288 |
| BmgT120I | GGNCC | 2 cut(s) | 912, 1196 |
| BmiI | GGNNCC | 2 cut(s) | 1048, 1180 |
| BmrFI | CCNGG | 1 cut(s) | 1335 |
| BmrI | ACTGGG | 1 cut(s) | 1300 |
| BmsI | GCATC | 3 cut(s) | 67, 240, 667 |
| BmtI | GCTAGC | 1 cut(s) | 1131 |
| BmuI | ACTGGG | 1 cut(s) | 1300 |
| BoxI | GACNNNNGTC | 2 cut(s) | 110, 170 |
| BpiI | GAAGAC | 1 cut(s) | 188 |
| BpmI | CTGGAG | 1 cut(s) | 4 |
| BpuEI | CTTGAG | 1 cut(s) | 1094 |
| BsaAI | YACGTR | 1 cut(s) | 740 |
| BsaI | GGTCTC | 2 cut(s) | 191, 844 |
| BsaJI | CCNNGG | 1 cut(s) | 1182 |
| BsaWI | WCCGGW | 3 cut(s) | 369, 803, 1099 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 224, 1334 |
| Bse1I | ACTGG | 2 cut(s) | 356, 1306 |
| Bse3DI | GCAATG | 2 cut(s) | 596, 783 |
| BseAI | TCCGGA | 1 cut(s) | 369 |
| BseBI | CCWGG | 1 cut(s) | 1335 |
| BseDI | CCNNGG | 1 cut(s) | 1182 |
| BseGI | GGATG | 2 cut(s) | 800, 821 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 224, 1334 |
| BseMI | GCAATG | 2 cut(s) | 596, 783 |
| BseMII | CTCAG | 6 cut(s) | 300, 402, 617, 927, 1047, 1104 |
| BseNI | ACTGG | 2 cut(s) | 356, 1306 |
| BseSI | GKGCMC | 1 cut(s) | 796 |
| BseX3I | CGGCCG | 1 cut(s) | 226 |
| BseXI | GCAGC | 3 cut(s) | 324, 769, 907 |
| BseYI | CCCAGC | 2 cut(s) | 333, 1122 |
| Bsh1236I | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| Bsh1285I | CGRYCG | 1 cut(s) | 229 |
| BshFI | GGCC | 2 cut(s) | 228, 914 |
| BsiEI | CGRYCG | 1 cut(s) | 229 |
| BsiHKAI | GWGCWC | 1 cut(s) | 535 |
| BsiHKCI | CYCGRG | 1 cut(s) | 288 |
| BsiSI | CCGG | 4 cut(s) | 225, 370, 804, 1100 |
| BslFI | GGGAC | 2 cut(s) | 98, 257 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 224, 1334 |
| BsmAI | GTCTC | 4 cut(s) | 191, 468, 844, 1225 |
| BsmFI | GGGAC | 2 cut(s) | 98, 257 |
| BsmI | GAATGC | 1 cut(s) | 1112 |
| BsnI | GGCC | 2 cut(s) | 228, 914 |
| Bso31I | GGTCTC | 2 cut(s) | 191, 844 |
| BsoBI | CYCGRG | 1 cut(s) | 288 |
| Bsp1286I | GDGCHC | 2 cut(s) | 535, 796 |
| Bsp13I | TCCGGA | 1 cut(s) | 369 |
| Bsp143I | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| Bsp19I | CCATGG | 1 cut(s) | 1182 |
| Bsp68I | TCGCGA | 1 cut(s) | 537 |
| BspACI | CCGC | 7 cut(s) | 102, 229, 266, 435, 528, 854, 924 |
| BspANI | GGCC | 2 cut(s) | 228, 914 |
| BspCNI | CTCAG | 6 cut(s) | 301, 401, 616, 928, 1048, 1103 |
| BspEI | TCCGGA | 1 cut(s) | 369 |
| BspFNI | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| BspHI | TCATGA | 2 cut(s) | 888, 949 |
| BspLI | GGNNCC | 2 cut(s) | 1048, 1180 |
| BspOI | GCTAGC | 1 cut(s) | 1131 |
| BspPI | GGATC | 3 cut(s) | 390, 587, 1181 |
| BspTI | CTTAAG | 1 cut(s) | 317 |
| BspTNI | GGTCTC | 2 cut(s) | 191, 844 |
| BsrDI | GCAATG | 2 cut(s) | 596, 783 |
| BsrI | ACTGG | 2 cut(s) | 356, 1306 |
| BssECI | CCNNGG | 1 cut(s) | 1182 |
| BssMI | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| BssT1I | CCWWGG | 1 cut(s) | 1182 |
| Bst2UI | CCWGG | 1 cut(s) | 1335 |
| Bst4CI | ACNGT | 3 cut(s) | 798, 886, 1219 |
| Bst6I | CTCTTC | 1 cut(s) | 89 |
| BstAFI | CTTAAG | 1 cut(s) | 317 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 452, 782 |
| BstBAI | YACGTR | 1 cut(s) | 740 |
| BstC8I | GCNNGC | 6 cut(s) | 305, 408, 433, 535, 702, 1129 |
| BstDEI | CTNAG | 8 cut(s) | 169, 309, 388, 603, 936, 964, 1056, 1090 |
| BstDSI | CCRYGG | 1 cut(s) | 1182 |
| BstF5I | GGATG | 2 cut(s) | 800, 821 |
| BstFNI | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| BstKTI | GATC | 7 cut(s) | 9, 385, 394, 595, 710, 894, 1176 |
| BstMAI | GTCTC | 4 cut(s) | 191, 468, 844, 1225 |
| BstMBI | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| BstMCI | CGRYCG | 1 cut(s) | 229 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 403, 452, 534, 782, 791, 920, 929, 938, 1128 |
| BstNI | CCWGG | 1 cut(s) | 1335 |
| BstNSI | RCATGY | 2 cut(s) | 776, 1351 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 110, 170 |
| BstSCI | CCNGG | 1 cut(s) | 1333 |
| BstSLI | GKGCMC | 1 cut(s) | 796 |
| BstUI | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| BstV1I | GCAGC | 3 cut(s) | 324, 769, 907 |
| BstV2I | GAAGAC | 1 cut(s) | 188 |
| BstX2I | RGATCY | 2 cut(s) | 391, 592 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 742 |
| BstYI | RGATCY | 2 cut(s) | 391, 592 |
| BstZI | CGGCCG | 1 cut(s) | 226 |
| BsuI | GTATCC | 3 cut(s) | 478, 485, 874 |
| BsuRI | GGCC | 2 cut(s) | 228, 914 |
| BtgI | CCRYGG | 1 cut(s) | 1182 |
| BtsCI | GGATG | 2 cut(s) | 800, 821 |
| BtsI | GCAGTG | 2 cut(s) | 695, 846 |
| BtsIMutI | CAGTG | 4 cut(s) | 695, 794, 846, 1215 |
| BtuMI | TCGCGA | 1 cut(s) | 537 |
| Cac8I | GCNNGC | 6 cut(s) | 305, 408, 433, 535, 702, 1129 |
| CciI | TCATGA | 2 cut(s) | 888, 949 |
| Cfr13I | GGNCC | 2 cut(s) | 912, 1196 |
| CseI | GACGC | 3 cut(s) | 272, 938, 953 |
| Csp6I | GTAC | 2 cut(s) | 548, 807 |
| CviAII | CATG | 8 cut(s) | 773, 836, 847, 889, 950, 1183, 1257, 1348 |
| CviQI | GTAC | 2 cut(s) | 548, 807 |
| DdeI | CTNAG | 8 cut(s) | 169, 309, 388, 603, 936, 964, 1056, 1090 |
| DpnI | GATC | 7 cut(s) | 8, 384, 393, 594, 709, 893, 1175 |
| DpnII | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| DraI | TTTAAA | 1 cut(s) | 1138 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 269 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 269 |
| EaeI | YGGCCR | 1 cut(s) | 226 |
| EagI | CGGCCG | 1 cut(s) | 226 |
| Eam1104I | CTCTTC | 1 cut(s) | 89 |
| EarI | CTCTTC | 1 cut(s) | 89 |
| Ecl136II | GAGCTC | 1 cut(s) | 533 |
| EclXI | CGGCCG | 1 cut(s) | 226 |
| Eco130I | CCWWGG | 1 cut(s) | 1182 |
| Eco24I | GRGCYC | 1 cut(s) | 535 |
| Eco31I | GGTCTC | 2 cut(s) | 191, 844 |
| Eco32I | GATATC | 1 cut(s) | 1105 |
| Eco47I | GGWCC | 1 cut(s) | 1196 |
| Eco52I | CGGCCG | 1 cut(s) | 226 |
| Eco53kI | GAGCTC | 1 cut(s) | 533 |
| Eco57I | CTGAAG | 1 cut(s) | 38 |
| Eco72I | CACGTG | 1 cut(s) | 740 |
| Eco88I | CYCGRG | 1 cut(s) | 288 |
| EcoICRI | GAGCTC | 1 cut(s) | 533 |
| EcoRI | GAATTC | 1 cut(s) | 862 |
| EcoRII | CCWGG | 1 cut(s) | 1333 |
| EcoRV | GATATC | 1 cut(s) | 1105 |
| EcoT14I | CCWWGG | 1 cut(s) | 1182 |
| EcoT22I | ATGCAT | 1 cut(s) | 1114 |
| EcoT38I | GRGCYC | 1 cut(s) | 535 |
| ErhI | CCWWGG | 1 cut(s) | 1182 |
| FaeI | CATG | 8 cut(s) | 776, 839, 850, 892, 953, 1186, 1260, 1351 |
| FaqI | GGGAC | 2 cut(s) | 98, 257 |
| FatI | CATG | 8 cut(s) | 772, 835, 846, 888, 949, 1182, 1256, 1347 |
| FauI | CCCGC | 2 cut(s) | 109, 259 |
| Fnu4HI | GCNGC | 5 cut(s) | 229, 338, 783, 921, 924 |
| FokI | GGATG | 2 cut(s) | 787, 808 |
| FriOI | GRGCYC | 1 cut(s) | 535 |
| Fsp4HI | GCNGC | 5 cut(s) | 229, 338, 783, 921, 924 |
| FspBI | CTAG | 3 cut(s) | 756, 789, 1128 |
| GluI | GCNGC | 5 cut(s) | 229, 338, 783, 921, 924 |
| GsaI | CCCAGC | 2 cut(s) | 337, 1126 |
| GsuI | CTGGAG | 1 cut(s) | 4 |
| HaeIII | GGCC | 2 cut(s) | 228, 914 |
| HapII | CCGG | 4 cut(s) | 225, 370, 804, 1100 |
| HgaI | GACGC | 3 cut(s) | 272, 938, 953 |
| Hin1II | CATG | 8 cut(s) | 776, 839, 850, 892, 953, 1186, 1260, 1351 |
| HindIII | AAGCTT | 1 cut(s) | 320 |
| HinfI | GANTC | 5 cut(s) | 291, 983, 996, 1041, 1162 |
| HpaII | CCGG | 4 cut(s) | 225, 370, 804, 1100 |
| HphI | GGTGA | 3 cut(s) | 804, 1040, 1273 |
| Hpy166II | GTNNAC | 5 cut(s) | 175, 550, 844, 970, 1264 |
| Hpy188I | TCNGA | 8 cut(s) | 391, 606, 896, 937, 1046, 1057, 1093, 1178 |
| Hpy8I | GTNNAC | 5 cut(s) | 175, 550, 844, 970, 1264 |
| Hpy99I | CGWCG | 5 cut(s) | 266, 542, 715, 932, 1229 |
| HpyAV | CCTTC | 2 cut(s) | 362, 367 |
| HpyCH4III | ACNGT | 3 cut(s) | 798, 886, 1219 |
| HpyCH4IV | ACGT | 3 cut(s) | 111, 723, 739 |
| HpyCH4V | TGCA | 5 cut(s) | 776, 839, 1024, 1112, 1202 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 403, 452, 534, 782, 791, 920, 929, 938, 1128 |
| HpyF3I | CTNAG | 8 cut(s) | 169, 309, 388, 603, 936, 964, 1056, 1090 |
| HpySE526I | ACGT | 3 cut(s) | 111, 723, 739 |
| Hsp92II | CATG | 8 cut(s) | 776, 839, 850, 892, 953, 1186, 1260, 1351 |
| Kpn2I | TCCGGA | 1 cut(s) | 369 |
| Kzo9I | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| LmnI | GCTCC | 1 cut(s) | 530 |
| Lsp1109I | GCAGC | 3 cut(s) | 324, 769, 907 |
| LweI | GCATC | 3 cut(s) | 67, 240, 667 |
| MaeI | CTAG | 3 cut(s) | 756, 789, 1128 |
| MaeII | ACGT | 3 cut(s) | 111, 723, 739 |
| MaeIII | GTNAC | 1 cut(s) | 959 |
| MalI | GATC | 7 cut(s) | 8, 384, 393, 594, 709, 893, 1175 |
| MboI | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| MboII | GAAGA | 8 cut(s) | 33, 36, 39, 76, 193, 353, 571, 1043 |
| MfeI | CAATTG | 1 cut(s) | 295 |
| MflI | RGATCY | 2 cut(s) | 391, 592 |
| MhlI | GDGCHC | 2 cut(s) | 535, 796 |
| MluCI | AATT | 5 cut(s) | 219, 295, 649, 862, 975 |
| MlyI | GAGTC | 2 cut(s) | 300, 1171 |
| Mph1103I | ATGCAT | 1 cut(s) | 1114 |
| MroI | TCCGGA | 1 cut(s) | 369 |
| MroXI | GAANNNNTTC | 3 cut(s) | 723, 862, 1051 |
| MseI | TTAA | 5 cut(s) | 146, 318, 620, 639, 1137 |
| MslI | CAYNNNNRTG | 1 cut(s) | 740 |
| MspA1I | CMGCKG | 1 cut(s) | 337 |
| MspCI | CTTAAG | 1 cut(s) | 317 |
| MspI | CCGG | 4 cut(s) | 225, 370, 804, 1100 |
| MspR9I | CCNGG | 1 cut(s) | 1335 |
| MunI | CAATTG | 1 cut(s) | 295 |
| Mva1269I | GAATGC | 1 cut(s) | 1112 |
| MvaI | CCWGG | 1 cut(s) | 1335 |
| MvnI | CGCG | 5 cut(s) | 104, 266, 528, 537, 856 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 403, 452, 534, 782, 791, 920, 929, 938, 1128 |
| NcoI | CCATGG | 1 cut(s) | 1182 |
| NdeII | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| NheI | GCTAGC | 1 cut(s) | 1127 |
| NlaIII | CATG | 8 cut(s) | 776, 839, 850, 892, 953, 1186, 1260, 1351 |
| NlaIV | GGNNCC | 2 cut(s) | 1048, 1180 |
| NmuCI | GTSAC | 1 cut(s) | 959 |
| NruI | TCGCGA | 1 cut(s) | 537 |
| NsiI | ATGCAT | 1 cut(s) | 1114 |
| NspI | RCATGY | 2 cut(s) | 776, 1351 |
| OliI | CACNNNNGTG | 1 cut(s) | 740 |
| PagI | TCATGA | 2 cut(s) | 888, 949 |
| PctI | GAATGC | 1 cut(s) | 1112 |
| PdmI | GAANNNNTTC | 3 cut(s) | 723, 862, 1051 |
| PfeI | GAWTC | 3 cut(s) | 983, 996, 1041 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1334 |
| PfoI | TCCNGGA | 1 cut(s) | 1333 |
| PkrI | GCNGC | 5 cut(s) | 230, 339, 784, 922, 925 |
| PleI | GAGTC | 2 cut(s) | 299, 1170 |
| PmaCI | CACGTG | 1 cut(s) | 740 |
| PmlI | CACGTG | 1 cut(s) | 740 |
| PpsI | GAGTC | 2 cut(s) | 299, 1170 |
| Ppu21I | YACGTR | 1 cut(s) | 740 |
| PshAI | GACNNNNGTC | 2 cut(s) | 110, 170 |
| Psp124BI | GAGCTC | 1 cut(s) | 535 |
| Psp1406I | AACGTT | 1 cut(s) | 723 |
| Psp6I | CCWGG | 1 cut(s) | 1333 |
| PspCI | CACGTG | 1 cut(s) | 740 |
| PspFI | CCCAGC | 2 cut(s) | 333, 1122 |
| PspGI | CCWGG | 1 cut(s) | 1333 |
| PspN4I | GGNNCC | 2 cut(s) | 1048, 1180 |
| PspPI | GGNCC | 2 cut(s) | 912, 1196 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 230, 262 |
| PsuI | RGATCY | 2 cut(s) | 391, 592 |
| PvuII | CAGCTG | 1 cut(s) | 337 |
| RruI | TCGCGA | 1 cut(s) | 537 |
| RsaI | GTAC | 2 cut(s) | 549, 808 |
| RsaNI | GTAC | 2 cut(s) | 548, 807 |
| RseI | CAYNNNNRTG | 1 cut(s) | 740 |
| SacI | GAGCTC | 1 cut(s) | 535 |
| SaqAI | TTAA | 5 cut(s) | 146, 318, 620, 639, 1137 |
| SatI | GCNGC | 5 cut(s) | 229, 338, 783, 921, 924 |
| Sau3AI | GATC | 7 cut(s) | 6, 382, 391, 592, 707, 891, 1173 |
| Sau96I | GGNCC | 2 cut(s) | 912, 1196 |
| SchI | GAGTC | 2 cut(s) | 300, 1171 |
| ScrFI | CCNGG | 1 cut(s) | 1335 |
| SduI | GDGCHC | 2 cut(s) | 535, 796 |
| SfaNI | GCATC | 3 cut(s) | 67, 240, 667 |
| SinI | GGWCC | 1 cut(s) | 1196 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 740 |
| SmlI | CTYRAG | 2 cut(s) | 317, 1073 |
| SmoI | CTYRAG | 2 cut(s) | 317, 1073 |
| SpeI | ACTAGT | 1 cut(s) | 755 |
| Sse9I | AATT | 5 cut(s) | 219, 295, 649, 862, 975 |
| SsiI | CCGC | 7 cut(s) | 102, 229, 266, 435, 528, 854, 924 |
| SspMI | CTAG | 3 cut(s) | 756, 789, 1128 |
| SstI | GAGCTC | 1 cut(s) | 535 |
| StyD4I | CCNGG | 1 cut(s) | 1333 |
| StyI | CCWWGG | 1 cut(s) | 1182 |
| TaaI | ACNGT | 3 cut(s) | 798, 886, 1219 |
| TaiI | ACGT | 3 cut(s) | 114, 726, 742 |
| TaqI | TCGA | 7 cut(s) | 87, 261, 282, 477, 710, 999, 1227 |
| TaqII | GACCGA | 1 cut(s) | 1184 |
| TasI | AATT | 5 cut(s) | 219, 295, 649, 862, 975 |
| TauI | GCSGC | 2 cut(s) | 231, 926 |
| TfiI | GAWTC | 3 cut(s) | 983, 996, 1041 |
| Tru1I | TTAA | 5 cut(s) | 146, 318, 620, 639, 1137 |
| Tru9I | TTAA | 5 cut(s) | 146, 318, 620, 639, 1137 |
| TscAI | CASTG | 4 cut(s) | 702, 801, 846, 1222 |
| TseFI | GTSAC | 1 cut(s) | 959 |
| TseI | GCWGC | 3 cut(s) | 337, 782, 920 |
| Tsp45I | GTSAC | 1 cut(s) | 959 |
| TspDTI | ATGAA | 2 cut(s) | 824, 875 |
| TspGWI | ACGGA | 3 cut(s) | 395, 448, 995 |
| TspRI | CASTG | 4 cut(s) | 702, 801, 846, 1222 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1334 |
| Vha464I | CTTAAG | 1 cut(s) | 317 |
| VpaK11BI | GGWCC | 1 cut(s) | 1196 |
| XapI | RAATTY | 1 cut(s) | 862 |
| XceI | RCATGY | 2 cut(s) | 776, 1351 |
| XmnI | GAANNNNTTC | 3 cut(s) | 723, 862, 1051 |
| XspI | CTAG | 3 cut(s) | 756, 789, 1128 |
| Zsp2I | ATGCAT | 1 cut(s) | 1114 |