ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 569 |
| Acc36I | ACCTGC | 1 cut(s) | 569 |
| AccII | CGCG | 1 cut(s) | 347 |
| AciI | CCGC | 4 cut(s) | 122, 130, 345, 508 |
| AclI | AACGTT | 1 cut(s) | 97 |
| AclWI | GGATC | 4 cut(s) | 111, 189, 541, 554 |
| AfaI | GTAC | 3 cut(s) | 175, 432, 744 |
| AgsI | TTSAA | 3 cut(s) | 257, 502, 515 |
| AjiI | CACGTC | 1 cut(s) | 626 |
| AluBI | AGCT | 5 cut(s) | 8, 127, 416, 520, 596 |
| AluI | AGCT | 5 cut(s) | 8, 127, 416, 520, 596 |
| Alw21I | GWGCWC | 1 cut(s) | 631 |
| Alw26I | GTCTC | 2 cut(s) | 39, 530 |
| Alw44I | GTGCAC | 1 cut(s) | 627 |
| AlwI | GGATC | 4 cut(s) | 111, 189, 541, 554 |
| Ama87I | CYCGRG | 1 cut(s) | 718 |
| AoxI | GGCC | 1 cut(s) | 495 |
| ApaLI | GTGCAC | 1 cut(s) | 627 |
| ApeKI | GCWGC | 1 cut(s) | 127 |
| AspS9I | GGNCC | 1 cut(s) | 555 |
| AsuHPI | GGTGA | 2 cut(s) | 517, 593 |
| AvaI | CYCGRG | 1 cut(s) | 718 |
| AvaII | GGWCC | 1 cut(s) | 555 |
| BaeGI | GKGCMC | 1 cut(s) | 631 |
| BamHI | GGATCC | 1 cut(s) | 546 |
| Bbv12I | GWGCWC | 1 cut(s) | 631 |
| BbvI | GCAGC | 1 cut(s) | 114 |
| BccI | CCATC | 3 cut(s) | 19, 23, 656 |
| BceAI | ACGGC | 1 cut(s) | 135 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 618, 652 |
| BclI | TGATCA | 1 cut(s) | 79 |
| BcoDI | GTCTC | 2 cut(s) | 39, 530 |
| BfaI | CTAG | 1 cut(s) | 225 |
| BfuAI | ACCTGC | 1 cut(s) | 569 |
| BisI | GCNGC | 2 cut(s) | 128, 345 |
| BlsI | GCNGC | 2 cut(s) | 129, 346 |
| Bme18I | GGWCC | 1 cut(s) | 555 |
| BmeT110I | CYCGRG | 1 cut(s) | 718 |
| BmgBI | CACGTC | 1 cut(s) | 626 |
| BmgT120I | GGNCC | 1 cut(s) | 555 |
| BmiI | GGNNCC | 2 cut(s) | 168, 548 |
| BmsI | GCATC | 1 cut(s) | 623 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 701, 733 |
| BsaAI | YACGTR | 1 cut(s) | 72 |
| BsaI | GGTCTC | 1 cut(s) | 39 |
| BsaJI | CCNNGG | 1 cut(s) | 558 |
| Bse1I | ACTGG | 2 cut(s) | 332, 370 |
| BseDI | CCNNGG | 1 cut(s) | 558 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseMII | CTCAG | 2 cut(s) | 408, 726 |
| BseNI | ACTGG | 2 cut(s) | 332, 370 |
| BseRI | GAGGAG | 1 cut(s) | 548 |
| BseSI | GKGCMC | 1 cut(s) | 631 |
| BseXI | GCAGC | 1 cut(s) | 114 |
| BsgI | GTGCAG | 2 cut(s) | 317, 335 |
| Bsh1236I | CGCG | 1 cut(s) | 347 |
| BshFI | GGCC | 1 cut(s) | 497 |
| BsiHKAI | GWGCWC | 1 cut(s) | 631 |
| BsiHKCI | CYCGRG | 1 cut(s) | 718 |
| BslFI | GGGAC | 3 cut(s) | 146, 256, 763 |
| BsmAI | GTCTC | 2 cut(s) | 39, 530 |
| BsmFI | GGGAC | 3 cut(s) | 146, 256, 763 |
| BsnI | GGCC | 1 cut(s) | 497 |
| Bso31I | GGTCTC | 1 cut(s) | 39 |
| BsoBI | CYCGRG | 1 cut(s) | 718 |
| Bsp1286I | GDGCHC | 1 cut(s) | 631 |
| Bsp143I | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| BspACI | CCGC | 4 cut(s) | 122, 130, 345, 508 |
| BspANI | GGCC | 1 cut(s) | 497 |
| BspCNI | CTCAG | 2 cut(s) | 409, 727 |
| BspFNI | CGCG | 1 cut(s) | 347 |
| BspHI | TCATGA | 1 cut(s) | 770 |
| BspLI | GGNNCC | 2 cut(s) | 168, 548 |
| BspMI | ACCTGC | 1 cut(s) | 569 |
| BspPI | GGATC | 4 cut(s) | 111, 189, 541, 554 |
| BspTNI | GGTCTC | 1 cut(s) | 39 |
| BsrI | ACTGG | 2 cut(s) | 332, 370 |
| BssECI | CCNNGG | 1 cut(s) | 558 |
| BssMI | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| BssT1I | CCWWGG | 1 cut(s) | 558 |
| Bst4CI | ACNGT | 1 cut(s) | 261 |
| BstBAI | YACGTR | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 381, 414 |
| BstDEI | CTNAG | 3 cut(s) | 417, 735, 757 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstFNI | CGCG | 1 cut(s) | 347 |
| BstKTI | GATC | 5 cut(s) | 82, 106, 184, 549, 586 |
| BstMAI | GTCTC | 2 cut(s) | 39, 530 |
| BstMBI | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 385 |
| BstSLI | GKGCMC | 1 cut(s) | 631 |
| BstUI | CGCG | 1 cut(s) | 347 |
| BstV1I | GCAGC | 1 cut(s) | 114 |
| BstX2I | RGATCY | 1 cut(s) | 546 |
| BstYI | RGATCY | 1 cut(s) | 546 |
| BsuRI | GGCC | 1 cut(s) | 497 |
| BtrI | CACGTC | 1 cut(s) | 626 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| BtsI | GCAGTG | 2 cut(s) | 318, 323 |
| BtsIMutI | CAGTG | 2 cut(s) | 318, 323 |
| BveI | ACCTGC | 1 cut(s) | 569 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 381, 414 |
| CciI | TCATGA | 1 cut(s) | 770 |
| Cfr13I | GGNCC | 1 cut(s) | 555 |
| CseI | GACGC | 3 cut(s) | 203, 237, 336 |
| Csp6I | GTAC | 3 cut(s) | 174, 431, 743 |
| CviAII | CATG | 2 cut(s) | 403, 771 |
| CviQI | GTAC | 3 cut(s) | 174, 431, 743 |
| DdeI | CTNAG | 3 cut(s) | 417, 735, 757 |
| DpnI | GATC | 5 cut(s) | 81, 105, 183, 548, 585 |
| DpnII | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| EciI | GGCGGA | 1 cut(s) | 137 |
| Eco130I | CCWWGG | 1 cut(s) | 558 |
| Eco147I | AGGCCT | 1 cut(s) | 497 |
| Eco31I | GGTCTC | 1 cut(s) | 39 |
| Eco47I | GGWCC | 1 cut(s) | 555 |
| Eco88I | CYCGRG | 1 cut(s) | 718 |
| EcoT14I | CCWWGG | 1 cut(s) | 558 |
| ErhI | CCWWGG | 1 cut(s) | 558 |
| FaeI | CATG | 2 cut(s) | 406, 774 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 636, 668 |
| FaqI | GGGAC | 3 cut(s) | 146, 256, 763 |
| FatI | CATG | 2 cut(s) | 402, 770 |
| FauI | CCCGC | 1 cut(s) | 123 |
| FbaI | TGATCA | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 2 cut(s) | 128, 345 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 2 cut(s) | 128, 345 |
| FspBI | CTAG | 1 cut(s) | 225 |
| GluI | GCNGC | 2 cut(s) | 128, 345 |
| HaeIII | GGCC | 1 cut(s) | 497 |
| HgaI | GACGC | 3 cut(s) | 203, 237, 336 |
| Hin1II | CATG | 2 cut(s) | 406, 774 |
| HindIII | AAGCTT | 1 cut(s) | 6 |
| HinfI | GANTC | 3 cut(s) | 157, 269, 680 |
| HphI | GGTGA | 2 cut(s) | 517, 593 |
| Hpy166II | GTNNAC | 2 cut(s) | 629, 745 |
| Hpy188I | TCNGA | 7 cut(s) | 79, 87, 181, 280, 588, 661, 679 |
| Hpy188III | TCNNGA | 3 cut(s) | 515, 544, 771 |
| Hpy8I | GTNNAC | 2 cut(s) | 629, 745 |
| Hpy99I | CGWCG | 2 cut(s) | 181, 352 |
| HpyAV | CCTTC | 2 cut(s) | 295, 689 |
| HpyCH4III | ACNGT | 1 cut(s) | 261 |
| HpyCH4IV | ACGT | 5 cut(s) | 71, 97, 176, 433, 625 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 202, 298, 316, 379, 478, 629 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 385 |
| HpyF3I | CTNAG | 3 cut(s) | 417, 735, 757 |
| HpySE526I | ACGT | 5 cut(s) | 71, 97, 176, 433, 625 |
| Hsp92II | CATG | 2 cut(s) | 406, 774 |
| Ksp22I | TGATCA | 1 cut(s) | 79 |
| Kzo9I | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| LmnI | GCTCC | 1 cut(s) | 124 |
| Lsp1109I | GCAGC | 1 cut(s) | 114 |
| LweI | GCATC | 1 cut(s) | 623 |
| MaeI | CTAG | 1 cut(s) | 225 |
| MaeII | ACGT | 5 cut(s) | 71, 97, 176, 433, 625 |
| MaeIII | GTNAC | 2 cut(s) | 158, 703 |
| MalI | GATC | 5 cut(s) | 81, 105, 183, 548, 585 |
| MboI | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| MboII | GAAGA | 1 cut(s) | 364 |
| MflI | RGATCY | 1 cut(s) | 546 |
| MhlI | GDGCHC | 1 cut(s) | 631 |
| MluCI | AATT | 2 cut(s) | 145, 374 |
| MlyI | GAGTC | 3 cut(s) | 166, 278, 689 |
| MmeI | TCCRAC | 1 cut(s) | 159 |
| MnlI | CCTC | 6 cut(s) | 10, 160, 228, 417, 526, 730 |
| MseI | TTAA | 5 cut(s) | 90, 357, 443, 573, 654 |
| MslI | CAYNNNNRTG | 1 cut(s) | 483 |
| MvnI | CGCG | 1 cut(s) | 347 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 385 |
| NdeII | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| NlaIII | CATG | 2 cut(s) | 406, 774 |
| NlaIV | GGNNCC | 2 cut(s) | 168, 548 |
| NmuCI | GTSAC | 1 cut(s) | 158 |
| PagI | TCATGA | 1 cut(s) | 770 |
| PaqCI | CACCTGC | 1 cut(s) | 569 |
| PceI | AGGCCT | 1 cut(s) | 497 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 103 |
| PkrI | GCNGC | 2 cut(s) | 129, 346 |
| PleI | GAGTC | 3 cut(s) | 165, 277, 688 |
| PpsI | GAGTC | 3 cut(s) | 165, 277, 688 |
| Ppu21I | YACGTR | 1 cut(s) | 72 |
| Psp1406I | AACGTT | 1 cut(s) | 97 |
| PspN4I | GGNNCC | 2 cut(s) | 168, 548 |
| PspPI | GGNCC | 1 cut(s) | 555 |
| PsuI | RGATCY | 1 cut(s) | 546 |
| RsaI | GTAC | 3 cut(s) | 175, 432, 744 |
| RsaNI | GTAC | 3 cut(s) | 174, 431, 743 |
| RseI | CAYNNNNRTG | 1 cut(s) | 483 |
| SaqAI | TTAA | 5 cut(s) | 90, 357, 443, 573, 654 |
| SatI | GCNGC | 2 cut(s) | 128, 345 |
| Sau3AI | GATC | 5 cut(s) | 79, 103, 181, 546, 583 |
| Sau96I | GGNCC | 1 cut(s) | 555 |
| SchI | GAGTC | 3 cut(s) | 166, 278, 689 |
| SduI | GDGCHC | 1 cut(s) | 631 |
| SfaNI | GCATC | 1 cut(s) | 623 |
| SinI | GGWCC | 1 cut(s) | 555 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 483 |
| Sse9I | AATT | 2 cut(s) | 145, 374 |
| SseBI | AGGCCT | 1 cut(s) | 497 |
| SsiI | CCGC | 4 cut(s) | 122, 130, 345, 508 |
| SspMI | CTAG | 1 cut(s) | 225 |
| StuI | AGGCCT | 1 cut(s) | 497 |
| StyI | CCWWGG | 1 cut(s) | 558 |
| TaaI | ACNGT | 1 cut(s) | 261 |
| TaiI | ACGT | 5 cut(s) | 74, 100, 179, 436, 628 |
| TaqI | TCGA | 4 cut(s) | 106, 340, 350, 638 |
| TasI | AATT | 2 cut(s) | 145, 374 |
| TatI | WGTACW | 1 cut(s) | 742 |
| TauI | GCSGC | 1 cut(s) | 347 |
| Tru1I | TTAA | 5 cut(s) | 90, 357, 443, 573, 654 |
| Tru9I | TTAA | 5 cut(s) | 90, 357, 443, 573, 654 |
| TscAI | CASTG | 2 cut(s) | 318, 323 |
| TseFI | GTSAC | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 127 |
| Tsp45I | GTSAC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 2 cut(s) | 391, 593 |
| TspRI | CASTG | 2 cut(s) | 318, 323 |
| VneI | GTGCAC | 1 cut(s) | 627 |
| VpaK11BI | GGWCC | 1 cut(s) | 555 |
| XspI | CTAG | 1 cut(s) | 225 |