ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 168 |
| AccBSI | CCGCTC | 1 cut(s) | 272 |
| AciI | CCGC | 1 cut(s) | 270 |
| AclWI | GGATC | 1 cut(s) | 165 |
| AcoI | YGGCCR | 2 cut(s) | 3, 267 |
| AfaI | GTAC | 2 cut(s) | 10, 262 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 2 cut(s) | 37, 67 |
| AjnI | CCWGG | 1 cut(s) | 264 |
| AluBI | AGCT | 1 cut(s) | 221 |
| AluI | AGCT | 1 cut(s) | 221 |
| Alw26I | GTCTC | 1 cut(s) | 186 |
| AlwI | GGATC | 1 cut(s) | 165 |
| Ama87I | CYCGRG | 1 cut(s) | 183 |
| AoxI | GGCC | 3 cut(s) | 3, 30, 267 |
| AsuHPI | GGTGA | 1 cut(s) | 144 |
| AvaI | CYCGRG | 1 cut(s) | 183 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BauI | CACGAG | 1 cut(s) | 92 |
| BciT130I | CCWGG | 1 cut(s) | 266 |
| BcoDI | GTCTC | 1 cut(s) | 186 |
| BfaI | CTAG | 1 cut(s) | 120 |
| BfmI | CTRYAG | 1 cut(s) | 55 |
| BfuAI | ACCTGC | 1 cut(s) | 168 |
| BisI | GCNGC | 1 cut(s) | 270 |
| BlsI | GCNGC | 1 cut(s) | 271 |
| BmcAI | AGTACT | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 1 cut(s) | 266 |
| BmeT110I | CYCGRG | 1 cut(s) | 183 |
| BmiI | GGNNCC | 1 cut(s) | 251 |
| BmrFI | CCNGG | 1 cut(s) | 266 |
| BmsI | GCATC | 1 cut(s) | 76 |
| Bpu10I | CCTNAGC | 1 cut(s) | 273 |
| BsaI | GGTCTC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 2 cut(s) | 264, 287 |
| BsaWI | WCCGGW | 1 cut(s) | 154 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 144, 174 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| Bse1I | ACTGG | 2 cut(s) | 6, 208 |
| BseBI | CCWGG | 1 cut(s) | 266 |
| BseDI | CCNNGG | 2 cut(s) | 264, 287 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 287 |
| BseNI | ACTGG | 2 cut(s) | 6, 208 |
| BshFI | GGCC | 3 cut(s) | 5, 32, 269 |
| BsiHKCI | CYCGRG | 1 cut(s) | 183 |
| BsiSI | CCGG | 1 cut(s) | 155 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsmAI | GTCTC | 1 cut(s) | 186 |
| BsnI | GGCC | 3 cut(s) | 5, 32, 269 |
| Bso31I | GGTCTC | 1 cut(s) | 186 |
| BsoBI | CYCGRG | 1 cut(s) | 183 |
| Bsp143I | GATC | 1 cut(s) | 157 |
| Bsp19I | CCATGG | 1 cut(s) | 287 |
| BspACI | CCGC | 1 cut(s) | 270 |
| BspANI | GGCC | 3 cut(s) | 5, 32, 269 |
| BspCNI | CTCAG | 1 cut(s) | 286 |
| BspLI | GGNNCC | 1 cut(s) | 251 |
| BspMAI | CTGCAG | 1 cut(s) | 59 |
| BspMI | ACCTGC | 1 cut(s) | 168 |
| BspPI | GGATC | 1 cut(s) | 165 |
| BspTNI | GGTCTC | 1 cut(s) | 186 |
| BsrBI | CCGCTC | 1 cut(s) | 272 |
| BsrI | ACTGG | 2 cut(s) | 6, 208 |
| BssECI | CCNNGG | 2 cut(s) | 264, 287 |
| BssMI | GATC | 1 cut(s) | 157 |
| BssSI | CACGAG | 1 cut(s) | 92 |
| BssT1I | CCWWGG | 1 cut(s) | 287 |
| Bst2BI | CACGAG | 1 cut(s) | 92 |
| Bst2UI | CCWGG | 1 cut(s) | 266 |
| Bst6I | CTCTTC | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 2 cut(s) | 30, 301 |
| BstDEI | CTNAG | 1 cut(s) | 273 |
| BstDSI | CCRYGG | 1 cut(s) | 287 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 26 |
| BstKTI | GATC | 1 cut(s) | 160 |
| BstMAI | GTCTC | 1 cut(s) | 186 |
| BstMBI | GATC | 1 cut(s) | 157 |
| BstNI | CCWGG | 1 cut(s) | 266 |
| BstSCI | CCNGG | 1 cut(s) | 264 |
| BstSFI | CTRYAG | 1 cut(s) | 55 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BsuRI | GGCC | 3 cut(s) | 5, 32, 269 |
| BtgI | CCRYGG | 1 cut(s) | 287 |
| BveI | ACCTGC | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 2 cut(s) | 30, 301 |
| Csp6I | GTAC | 2 cut(s) | 9, 261 |
| CviAII | CATG | 3 cut(s) | 25, 73, 288 |
| CviJI | RGCY | 7 cut(s) | 5, 32, 63, 123, 221, 269, 292 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 32, 63, 123, 221, 269, 292 |
| CviQI | GTAC | 2 cut(s) | 9, 261 |
| DdeI | CTNAG | 1 cut(s) | 273 |
| DpnI | GATC | 1 cut(s) | 159 |
| DpnII | GATC | 1 cut(s) | 157 |
| EaeI | YGGCCR | 2 cut(s) | 3, 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 23 |
| EarI | CTCTTC | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 1 cut(s) | 287 |
| Eco147I | AGGCCT | 1 cut(s) | 32 |
| Eco31I | GGTCTC | 1 cut(s) | 186 |
| Eco88I | CYCGRG | 1 cut(s) | 183 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 26 |
| EcoRII | CCWGG | 1 cut(s) | 264 |
| EcoT14I | CCWWGG | 1 cut(s) | 287 |
| ErhI | CCWWGG | 1 cut(s) | 287 |
| FaeI | CATG | 3 cut(s) | 28, 76, 291 |
| FaiI | YATR | 5 cut(s) | 26, 74, 106, 213, 289 |
| FatI | CATG | 3 cut(s) | 24, 72, 287 |
| Fnu4HI | GCNGC | 1 cut(s) | 270 |
| Fsp4HI | GCNGC | 1 cut(s) | 270 |
| FspBI | CTAG | 1 cut(s) | 120 |
| GluI | GCNGC | 1 cut(s) | 270 |
| HaeIII | GGCC | 3 cut(s) | 5, 32, 269 |
| HapII | CCGG | 1 cut(s) | 155 |
| Hin1II | CATG | 3 cut(s) | 28, 76, 291 |
| HincII | GTYRAC | 1 cut(s) | 110 |
| HindII | GTYRAC | 1 cut(s) | 110 |
| HinfI | GANTC | 1 cut(s) | 232 |
| HpaII | CCGG | 1 cut(s) | 155 |
| HphI | GGTGA | 1 cut(s) | 144 |
| Hpy166II | GTNNAC | 2 cut(s) | 110, 261 |
| Hpy188I | TCNGA | 1 cut(s) | 139 |
| Hpy188III | TCNNGA | 4 cut(s) | 37, 94, 163, 183 |
| Hpy8I | GTNNAC | 2 cut(s) | 110, 261 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 2 cut(s) | 28, 57 |
| HpyF3I | CTNAG | 1 cut(s) | 273 |
| Hsp92II | CATG | 3 cut(s) | 28, 76, 291 |
| Kzo9I | GATC | 1 cut(s) | 157 |
| LweI | GCATC | 1 cut(s) | 76 |
| MaeI | CTAG | 1 cut(s) | 120 |
| MalI | GATC | 1 cut(s) | 159 |
| MbiI | CCGCTC | 1 cut(s) | 272 |
| MboI | GATC | 1 cut(s) | 157 |
| MboII | GAAGA | 2 cut(s) | 10, 272 |
| MfeI | CAATTG | 1 cut(s) | 225 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 225 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 7 cut(s) | 26, 32, 53, 101, 160, 178, 179 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 155 |
| MspR9I | CCNGG | 1 cut(s) | 266 |
| MunI | CAATTG | 1 cut(s) | 225 |
| MvaI | CCWGG | 1 cut(s) | 266 |
| NcoI | CCATGG | 1 cut(s) | 287 |
| NdeII | GATC | 1 cut(s) | 157 |
| NlaIII | CATG | 3 cut(s) | 28, 76, 291 |
| NlaIV | GGNNCC | 1 cut(s) | 251 |
| PaeR7I | CTCGAG | 1 cut(s) | 183 |
| PceI | AGGCCT | 1 cut(s) | 32 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 181 |
| PfeI | GAWTC | 1 cut(s) | 232 |
| PkrI | GCNGC | 1 cut(s) | 271 |
| Psp6I | CCWGG | 1 cut(s) | 264 |
| PspGI | CCWGG | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 1 cut(s) | 251 |
| PstI | CTGCAG | 1 cut(s) | 59 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| RsaI | GTAC | 2 cut(s) | 10, 262 |
| RsaNI | GTAC | 2 cut(s) | 9, 261 |
| SatI | GCNGC | 1 cut(s) | 270 |
| Sau3AI | GATC | 1 cut(s) | 157 |
| ScaI | AGTACT | 1 cut(s) | 10 |
| ScrFI | CCNGG | 1 cut(s) | 266 |
| SetI | ASST | 6 cut(s) | 170, 182, 190, 223, 255, 279 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| SfcI | CTRYAG | 1 cut(s) | 55 |
| Sfr274I | CTCGAG | 1 cut(s) | 183 |
| SlaI | CTCGAG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 1 cut(s) | 183 |
| SmoI | CTYRAG | 1 cut(s) | 183 |
| Sse9I | AATT | 1 cut(s) | 225 |
| SseBI | AGGCCT | 1 cut(s) | 32 |
| SsiI | CCGC | 1 cut(s) | 270 |
| SspMI | CTAG | 1 cut(s) | 120 |
| StuI | AGGCCT | 1 cut(s) | 32 |
| StyD4I | CCNGG | 1 cut(s) | 264 |
| StyI | CCWWGG | 1 cut(s) | 287 |
| TaqI | TCGA | 1 cut(s) | 184 |
| TasI | AATT | 1 cut(s) | 225 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TauI | GCSGC | 1 cut(s) | 272 |
| TfiI | GAWTC | 1 cut(s) | 232 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 26 |
| XhoI | CTCGAG | 1 cut(s) | 183 |
| XspI | CTAG | 1 cut(s) | 120 |
| ZrmI | AGTACT | 1 cut(s) | 10 |