ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 32, 488 |
| AclWI | GGATC | 1 cut(s) | 169 |
| AcsI | RAATTY | 1 cut(s) | 238 |
| AcuI | CTGAAG | 1 cut(s) | 48 |
| AfaI | GTAC | 1 cut(s) | 523 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 2 cut(s) | 249, 364 |
| AhlI | ACTAGT | 1 cut(s) | 599 |
| AjnI | CCWGG | 2 cut(s) | 157, 268 |
| AluBI | AGCT | 4 cut(s) | 91, 314, 482, 611 |
| AluI | AGCT | 4 cut(s) | 91, 314, 482, 611 |
| AlwI | GGATC | 1 cut(s) | 169 |
| ApeKI | GCWGC | 4 cut(s) | 88, 227, 482, 485 |
| ApoI | RAATTY | 1 cut(s) | 238 |
| BaeGI | GKGCMC | 1 cut(s) | 146 |
| BbvI | GCAGC | 4 cut(s) | 100, 239, 469, 497 |
| BccI | CCATC | 3 cut(s) | 13, 388, 415 |
| BciT130I | CCWGG | 2 cut(s) | 159, 270 |
| BclI | TGATCA | 1 cut(s) | 279 |
| BcuI | ACTAGT | 1 cut(s) | 599 |
| BfaI | CTAG | 2 cut(s) | 410, 600 |
| BfmI | CTRYAG | 2 cut(s) | 108, 483 |
| BisI | GCNGC | 4 cut(s) | 89, 228, 483, 486 |
| BlsI | GCNGC | 4 cut(s) | 90, 229, 484, 487 |
| Bme1390I | CCNGG | 2 cut(s) | 159, 270 |
| BmrFI | CCNGG | 2 cut(s) | 159, 270 |
| BmsI | GCATC | 3 cut(s) | 19, 63, 334 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 41, 73 |
| BpmI | CTGGAG | 1 cut(s) | 68 |
| BsaJI | CCNNGG | 2 cut(s) | 157, 269 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse1I | ACTGG | 1 cut(s) | 51 |
| BseBI | CCWGG | 2 cut(s) | 159, 270 |
| BseDI | CCNNGG | 2 cut(s) | 157, 269 |
| BseGI | GGATG | 2 cut(s) | 343, 547 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMII | CTCAG | 1 cut(s) | 365 |
| BseNI | ACTGG | 1 cut(s) | 51 |
| BseSI | GKGCMC | 1 cut(s) | 146 |
| BseXI | GCAGC | 4 cut(s) | 100, 239, 469, 497 |
| BslFI | GGGAC | 1 cut(s) | 139 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsmFI | GGGAC | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 1 cut(s) | 146 |
| Bsp143I | GATC | 2 cut(s) | 161, 279 |
| BspACI | CCGC | 2 cut(s) | 32, 488 |
| BspCNI | CTCAG | 1 cut(s) | 366 |
| BspMAI | CTGCAG | 1 cut(s) | 487 |
| BspPI | GGATC | 1 cut(s) | 169 |
| BsrI | ACTGG | 1 cut(s) | 51 |
| BssECI | CCNNGG | 2 cut(s) | 157, 269 |
| BssMI | GATC | 2 cut(s) | 161, 279 |
| Bst2UI | CCWGG | 2 cut(s) | 159, 270 |
| Bst4CI | ACNGT | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 349 |
| BstDEI | CTNAG | 3 cut(s) | 150, 295, 374 |
| BstF5I | GGATG | 2 cut(s) | 343, 547 |
| BstKTI | GATC | 2 cut(s) | 164, 282 |
| BstMBI | GATC | 2 cut(s) | 161, 279 |
| BstNI | CCWGG | 2 cut(s) | 159, 270 |
| BstSCI | CCNGG | 2 cut(s) | 157, 268 |
| BstSFI | CTRYAG | 2 cut(s) | 108, 483 |
| BstSLI | GKGCMC | 1 cut(s) | 146 |
| BstV1I | GCAGC | 4 cut(s) | 100, 239, 469, 497 |
| BtsCI | GGATG | 2 cut(s) | 343, 547 |
| BtsI | GCAGTG | 1 cut(s) | 559 |
| BtsIMutI | CAGTG | 2 cut(s) | 44, 559 |
| Cac8I | GCNNGC | 1 cut(s) | 349 |
| Csp6I | GTAC | 1 cut(s) | 522 |
| CviAII | CATG | 1 cut(s) | 618 |
| CviJI | RGCY | 8 cut(s) | 91, 314, 351, 359, 425, 435, 482, 611 |
| CviKI_1 | RGCY | 8 cut(s) | 91, 314, 351, 359, 425, 435, 482, 611 |
| CviQI | GTAC | 1 cut(s) | 522 |
| DdeI | CTNAG | 3 cut(s) | 150, 295, 374 |
| DpnI | GATC | 2 cut(s) | 163, 281 |
| DpnII | GATC | 2 cut(s) | 161, 279 |
| Eco57I | CTGAAG | 1 cut(s) | 48 |
| EcoRII | CCWGG | 2 cut(s) | 157, 268 |
| FaeI | CATG | 1 cut(s) | 621 |
| FaqI | GGGAC | 1 cut(s) | 139 |
| FatI | CATG | 1 cut(s) | 617 |
| FbaI | TGATCA | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 4 cut(s) | 89, 228, 483, 486 |
| FokI | GGATG | 2 cut(s) | 350, 554 |
| Fsp4HI | GCNGC | 4 cut(s) | 89, 228, 483, 486 |
| FspBI | CTAG | 2 cut(s) | 410, 600 |
| GluI | GCNGC | 4 cut(s) | 89, 228, 483, 486 |
| GsuI | CTGGAG | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 621 |
| HinfI | GANTC | 2 cut(s) | 202, 470 |
| Hpy166II | GTNNAC | 2 cut(s) | 469, 593 |
| Hpy188I | TCNGA | 3 cut(s) | 138, 166, 583 |
| Hpy188III | TCNNGA | 1 cut(s) | 410 |
| Hpy8I | GTNNAC | 2 cut(s) | 469, 593 |
| HpyAV | CCTTC | 4 cut(s) | 72, 255, 522, 539 |
| HpyCH4III | ACNGT | 1 cut(s) | 170 |
| HpyCH4V | TGCA | 4 cut(s) | 227, 325, 440, 485 |
| HpyF3I | CTNAG | 3 cut(s) | 150, 295, 374 |
| Hsp92II | CATG | 1 cut(s) | 621 |
| Ksp22I | TGATCA | 1 cut(s) | 279 |
| Kzo9I | GATC | 2 cut(s) | 161, 279 |
| Lsp1109I | GCAGC | 4 cut(s) | 100, 239, 469, 497 |
| LweI | GCATC | 3 cut(s) | 19, 63, 334 |
| MaeI | CTAG | 2 cut(s) | 410, 600 |
| MaeIII | GTNAC | 1 cut(s) | 67 |
| MalI | GATC | 2 cut(s) | 163, 281 |
| MboI | GATC | 2 cut(s) | 161, 279 |
| MhlI | GDGCHC | 1 cut(s) | 146 |
| MluCI | AATT | 3 cut(s) | 238, 365, 398 |
| MlyI | GAGTC | 1 cut(s) | 464 |
| MmeI | TCCRAC | 3 cut(s) | 214, 428, 561 |
| MnlI | CCTC | 7 cut(s) | 43, 106, 186, 327, 448, 453, 484 |
| MspA1I | CMGCKG | 1 cut(s) | 488 |
| MspR9I | CCNGG | 2 cut(s) | 159, 270 |
| MvaI | CCWGG | 2 cut(s) | 159, 270 |
| NdeII | GATC | 2 cut(s) | 161, 279 |
| NlaIII | CATG | 1 cut(s) | 621 |
| PfeI | GAWTC | 1 cut(s) | 202 |
| PkrI | GCNGC | 4 cut(s) | 90, 229, 484, 487 |
| PleI | GAGTC | 1 cut(s) | 464 |
| PpsI | GAGTC | 1 cut(s) | 464 |
| Psp6I | CCWGG | 2 cut(s) | 157, 268 |
| PspGI | CCWGG | 2 cut(s) | 157, 268 |
| PstI | CTGCAG | 1 cut(s) | 487 |
| RsaI | GTAC | 1 cut(s) | 523 |
| RsaNI | GTAC | 1 cut(s) | 522 |
| SatI | GCNGC | 4 cut(s) | 89, 228, 483, 486 |
| Sau3AI | GATC | 2 cut(s) | 161, 279 |
| SchI | GAGTC | 1 cut(s) | 464 |
| ScrFI | CCNGG | 2 cut(s) | 159, 270 |
| SduI | GDGCHC | 1 cut(s) | 146 |
| SetI | ASST | 8 cut(s) | 93, 316, 375, 464, 484, 495, 533, 613 |
| SfaNI | GCATC | 3 cut(s) | 19, 63, 334 |
| SfcI | CTRYAG | 2 cut(s) | 108, 483 |
| SpeI | ACTAGT | 1 cut(s) | 599 |
| Sse9I | AATT | 3 cut(s) | 238, 365, 398 |
| SsiI | CCGC | 2 cut(s) | 32, 488 |
| SspMI | CTAG | 2 cut(s) | 410, 600 |
| StyD4I | CCNGG | 2 cut(s) | 157, 268 |
| TaaI | ACNGT | 1 cut(s) | 170 |
| TasI | AATT | 3 cut(s) | 238, 365, 398 |
| TfiI | GAWTC | 1 cut(s) | 202 |
| TscAI | CASTG | 2 cut(s) | 51, 566 |
| TseI | GCWGC | 4 cut(s) | 88, 227, 482, 485 |
| TspDTI | ATGAA | 3 cut(s) | 95, 321, 558 |
| TspRI | CASTG | 2 cut(s) | 51, 566 |
| XapI | RAATTY | 1 cut(s) | 238 |
| XbaI | TCTAGA | 1 cut(s) | 409 |
| XspI | CTAG | 2 cut(s) | 410, 600 |