Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 405 |
| AciI | CCGC | 3 cut(s) | 143, 347, 389 |
| AcoI | YGGCCR | 1 cut(s) | 348 |
| AfaI | GTAC | 2 cut(s) | 12, 118 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 87 |
| AgsI | TTSAA | 3 cut(s) | 34, 242, 295 |
| AjnI | CCWGG | 1 cut(s) | 157 |
| AluBI | AGCT | 2 cut(s) | 341, 358 |
| AluI | AGCT | 2 cut(s) | 341, 358 |
| AoxI | GGCC | 2 cut(s) | 231, 348 |
| ApeKI | GCWGC | 3 cut(s) | 251, 341, 344 |
| AspS9I | GGNCC | 2 cut(s) | 231, 332 |
| AsuHPI | GGTGA | 1 cut(s) | 299 |
| AvaII | GGWCC | 1 cut(s) | 332 |
| BbvI | GCAGC | 3 cut(s) | 238, 328, 356 |
| BccI | CCATC | 1 cut(s) | 206 |
| BciT130I | CCWGG | 1 cut(s) | 159 |
| BfaI | CTAG | 1 cut(s) | 424 |
| BfmI | CTRYAG | 2 cut(s) | 252, 342 |
| BfuAI | ACCTGC | 1 cut(s) | 405 |
| BisI | GCNGC | 4 cut(s) | 252, 342, 345, 348 |
| BlsI | GCNGC | 4 cut(s) | 253, 343, 346, 349 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| Bme18I | GGWCC | 1 cut(s) | 332 |
| BmgT120I | GGNCC | 2 cut(s) | 231, 332 |
| BmiI | GGNNCC | 1 cut(s) | 163 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BmsI | GCATC | 1 cut(s) | 130 |
| BsaAI | YACGTR | 3 cut(s) | 116, 120, 168 |
| BsaJI | CCNNGG | 1 cut(s) | 272 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 109, 137, 139, 167 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 87 |
| BseBI | CCWGG | 1 cut(s) | 159 |
| BseDI | CCNNGG | 1 cut(s) | 272 |
| BseGI | GGATG | 1 cut(s) | 282 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BseMII | CTCAG | 1 cut(s) | 83 |
| BseXI | GCAGC | 3 cut(s) | 238, 328, 356 |
| BsgI | GTGCAG | 1 cut(s) | 114 |
| BshFI | GGCC | 2 cut(s) | 233, 350 |
| BsiWI | CGTACG | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BsnI | GGCC | 2 cut(s) | 233, 350 |
| BspACI | CCGC | 3 cut(s) | 143, 347, 389 |
| BspANI | GGCC | 2 cut(s) | 233, 350 |
| BspCNI | CTCAG | 1 cut(s) | 82 |
| BspLI | GGNNCC | 1 cut(s) | 163 |
| BspMAI | CTGCAG | 2 cut(s) | 256, 346 |
| BspMI | ACCTGC | 1 cut(s) | 405 |
| BssECI | CCNNGG | 1 cut(s) | 272 |
| Bst2UI | CCWGG | 1 cut(s) | 159 |
| Bst4CI | ACNGT | 1 cut(s) | 273 |
| BstBAI | YACGTR | 3 cut(s) | 116, 120, 168 |
| BstC8I | GCNNGC | 1 cut(s) | 105 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstDSI | CCRYGG | 1 cut(s) | 272 |
| BstF5I | GGATG | 1 cut(s) | 282 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 347 |
| BstNI | CCWGG | 1 cut(s) | 159 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BstSFI | CTRYAG | 2 cut(s) | 252, 342 |
| BstSNI | TACGTA | 2 cut(s) | 116, 120 |
| BstV1I | GCAGC | 3 cut(s) | 238, 328, 356 |
| BsuRI | GGCC | 2 cut(s) | 233, 350 |
| BtgI | CCRYGG | 1 cut(s) | 272 |
| BtsCI | GGATG | 1 cut(s) | 282 |
| BtsI | GCAGTG | 1 cut(s) | 210 |
| BtsIMutI | CAGTG | 1 cut(s) | 210 |
| BveI | ACCTGC | 1 cut(s) | 405 |
| Cac8I | GCNNGC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 2 cut(s) | 231, 332 |
| Csp6I | GTAC | 2 cut(s) | 11, 117 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 307, 342 |
| CviAII | CATG | 3 cut(s) | 104, 228, 304 |
| CviJI | RGCY | 8 cut(s) | 30, 164, 233, 251, 261, 341, 350, 358 |
| CviKI_1 | RGCY | 8 cut(s) | 30, 164, 233, 251, 261, 341, 350, 358 |
| CviQI | GTAC | 2 cut(s) | 11, 117 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| EaeI | YGGCCR | 1 cut(s) | 348 |
| Eco105I | TACGTA | 2 cut(s) | 116, 120 |
| Eco47I | GGWCC | 1 cut(s) | 332 |
| EcoRII | CCWGG | 1 cut(s) | 157 |
| FaeI | CATG | 3 cut(s) | 107, 231, 307 |
| FatI | CATG | 3 cut(s) | 103, 227, 303 |
| FauI | CCCGC | 1 cut(s) | 396 |
| Fnu4HI | GCNGC | 4 cut(s) | 252, 342, 345, 348 |
| FokI | GGATG | 1 cut(s) | 289 |
| Fsp4HI | GCNGC | 4 cut(s) | 252, 342, 345, 348 |
| FspBI | CTAG | 1 cut(s) | 424 |
| GluI | GCNGC | 4 cut(s) | 252, 342, 345, 348 |
| HaeIII | GGCC | 2 cut(s) | 233, 350 |
| Hin1II | CATG | 3 cut(s) | 107, 231, 307 |
| HindIII | AAGCTT | 1 cut(s) | 356 |
| HinfI | GANTC | 2 cut(s) | 65, 242 |
| HphI | GGTGA | 1 cut(s) | 299 |
| Hpy166II | GTNNAC | 1 cut(s) | 420 |
| Hpy188I | TCNGA | 3 cut(s) | 60, 129, 366 |
| Hpy8I | GTNNAC | 1 cut(s) | 420 |
| HpyAV | CCTTC | 1 cut(s) | 251 |
| HpyCH4III | ACNGT | 1 cut(s) | 273 |
| HpyCH4IV | ACGT | 3 cut(s) | 115, 119, 167 |
| HpyCH4V | TGCA | 4 cut(s) | 95, 203, 254, 344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 347 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| HpySE526I | ACGT | 3 cut(s) | 115, 119, 167 |
| Hsp92II | CATG | 3 cut(s) | 107, 231, 307 |
| LmnI | GCTCC | 1 cut(s) | 161 |
| LpnPI | CCDG | 4 cut(s) | 56, 144, 171, 400 |
| Lsp1109I | GCAGC | 3 cut(s) | 238, 328, 356 |
| LweI | GCATC | 1 cut(s) | 130 |
| MaeI | CTAG | 1 cut(s) | 424 |
| MaeII | ACGT | 3 cut(s) | 115, 119, 167 |
| MaeIII | GTNAC | 1 cut(s) | 383 |
| MluCI | AATT | 1 cut(s) | 172 |
| MnlI | CCTC | 3 cut(s) | 63, 210, 323 |
| MslI | CAYNNNNRTG | 1 cut(s) | 138 |
| MspA1I | CMGCKG | 1 cut(s) | 347 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| MvaI | CCWGG | 1 cut(s) | 159 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 347 |
| NlaIII | CATG | 3 cut(s) | 107, 231, 307 |
| NlaIV | GGNNCC | 1 cut(s) | 163 |
| NmuCI | GTSAC | 1 cut(s) | 383 |
| NspI | RCATGY | 1 cut(s) | 107 |
| PaeI | GCATGC | 1 cut(s) | 107 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 125 |
| PfeI | GAWTC | 2 cut(s) | 65, 242 |
| Pfl23II | CGTACG | 1 cut(s) | 116 |
| PfoI | TCCNGGA | 1 cut(s) | 157 |
| PkrI | GCNGC | 4 cut(s) | 253, 343, 346, 349 |
| Ppu21I | YACGTR | 3 cut(s) | 116, 120, 168 |
| Psp6I | CCWGG | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 157 |
| PspLI | CGTACG | 1 cut(s) | 116 |
| PspN4I | GGNNCC | 1 cut(s) | 163 |
| PspPI | GGNCC | 2 cut(s) | 231, 332 |
| PstI | CTGCAG | 2 cut(s) | 256, 346 |
| RsaI | GTAC | 2 cut(s) | 12, 118 |
| RsaNI | GTAC | 2 cut(s) | 11, 117 |
| RseI | CAYNNNNRTG | 1 cut(s) | 138 |
| SatI | GCNGC | 4 cut(s) | 252, 342, 345, 348 |
| Sau96I | GGNCC | 2 cut(s) | 231, 332 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SetI | ASST | 8 cut(s) | 118, 122, 170, 334, 343, 360, 419, 425 |
| SfaNI | GCATC | 1 cut(s) | 130 |
| SfcI | CTRYAG | 2 cut(s) | 252, 342 |
| SinI | GGWCC | 1 cut(s) | 332 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 138 |
| SnaBI | TACGTA | 2 cut(s) | 116, 120 |
| SphI | GCATGC | 1 cut(s) | 107 |
| Sse9I | AATT | 1 cut(s) | 172 |
| SsiI | CCGC | 3 cut(s) | 143, 347, 389 |
| SspMI | CTAG | 1 cut(s) | 424 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 1 cut(s) | 273 |
| TaiI | ACGT | 3 cut(s) | 118, 122, 170 |
| TasI | AATT | 1 cut(s) | 172 |
| TatI | WGTACW | 1 cut(s) | 10 |
| TauI | GCSGC | 1 cut(s) | 350 |
| TfiI | GAWTC | 2 cut(s) | 65, 242 |
| TscAI | CASTG | 1 cut(s) | 210 |
| TseFI | GTSAC | 1 cut(s) | 383 |
| TseI | GCWGC | 3 cut(s) | 251, 341, 344 |
| Tsp45I | GTSAC | 1 cut(s) | 383 |
| TspDTI | ATGAA | 1 cut(s) | 312 |
| TspRI | CASTG | 1 cut(s) | 210 |
| VpaK11BI | GGWCC | 1 cut(s) | 332 |
| XceI | RCATGY | 1 cut(s) | 107 |
| XspI | CTAG | 1 cut(s) | 424 |