ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 216 |
| AccIII | TCCGGA | 1 cut(s) | 9 |
| AciI | CCGC | 2 cut(s) | 290, 293 |
| AcvI | CACGTG | 1 cut(s) | 200 |
| AfaI | GTAC | 1 cut(s) | 243 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 16, 216, 336, 337 |
| AgsI | TTSAA | 1 cut(s) | 183 |
| AluBI | AGCT | 2 cut(s) | 48, 335 |
| AluI | AGCT | 2 cut(s) | 48, 335 |
| Alw26I | GTCTC | 2 cut(s) | 107, 134 |
| Ama87I | CYCGRG | 1 cut(s) | 93 |
| Aor13HI | TCCGGA | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 305 |
| ApeKI | GCWGC | 1 cut(s) | 45 |
| AvaI | CYCGRG | 1 cut(s) | 93 |
| BbrPI | CACGTG | 1 cut(s) | 200 |
| BbvI | GCAGC | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 130 |
| BcoDI | GTCTC | 2 cut(s) | 107, 134 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BfmI | CTRYAG | 1 cut(s) | 49 |
| BisI | GCNGC | 2 cut(s) | 46, 291 |
| BlsI | GCNGC | 2 cut(s) | 47, 292 |
| BmeT110I | CYCGRG | 1 cut(s) | 93 |
| Bsa29I | ATCGAT | 1 cut(s) | 275 |
| BsaAI | YACGTR | 3 cut(s) | 200, 241, 245 |
| BsaI | GGTCTC | 1 cut(s) | 107 |
| BsaWI | WCCGGW | 1 cut(s) | 9 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 16, 216, 336, 337 |
| BseAI | TCCGGA | 1 cut(s) | 9 |
| BseCI | ATCGAT | 1 cut(s) | 275 |
| BseGI | GGATG | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 16, 216, 336, 337 |
| BseRI | GAGGAG | 1 cut(s) | 311 |
| BseXI | GCAGC | 1 cut(s) | 57 |
| BseYI | CCCAGC | 1 cut(s) | 335 |
| BshFI | GGCC | 1 cut(s) | 307 |
| BshVI | ATCGAT | 1 cut(s) | 275 |
| BsiHKCI | CYCGRG | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 10 |
| BsiWI | CGTACG | 1 cut(s) | 241 |
| BslFI | GGGAC | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 16, 216, 336, 337 |
| BsmAI | GTCTC | 2 cut(s) | 107, 134 |
| BsmFI | GGGAC | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 307 |
| Bso31I | GGTCTC | 1 cut(s) | 107 |
| BsoBI | CYCGRG | 1 cut(s) | 93 |
| Bsp13I | TCCGGA | 1 cut(s) | 9 |
| BspACI | CCGC | 2 cut(s) | 290, 293 |
| BspANI | GGCC | 1 cut(s) | 307 |
| BspDI | ATCGAT | 1 cut(s) | 275 |
| BspEI | TCCGGA | 1 cut(s) | 9 |
| BspTNI | GGTCTC | 1 cut(s) | 107 |
| BstBAI | YACGTR | 3 cut(s) | 200, 241, 245 |
| BstDEI | CTNAG | 1 cut(s) | 129 |
| BstF5I | GGATG | 1 cut(s) | 225 |
| BstMAI | GTCTC | 2 cut(s) | 107, 134 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 42, 290 |
| BstNSI | RCATGY | 1 cut(s) | 266 |
| BstSFI | CTRYAG | 1 cut(s) | 49 |
| BstSNI | TACGTA | 1 cut(s) | 245 |
| BstV1I | GCAGC | 1 cut(s) | 57 |
| Bsu15I | ATCGAT | 1 cut(s) | 275 |
| BsuRI | GGCC | 1 cut(s) | 307 |
| BsuTUI | ATCGAT | 1 cut(s) | 275 |
| BtsCI | GGATG | 1 cut(s) | 225 |
| ClaI | ATCGAT | 1 cut(s) | 275 |
| Csp6I | GTAC | 1 cut(s) | 242 |
| CviAII | CATG | 3 cut(s) | 21, 211, 263 |
| CviJI | RGCY | 5 cut(s) | 5, 48, 307, 324, 335 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 48, 307, 324, 335 |
| CviQI | GTAC | 1 cut(s) | 242 |
| DdeI | CTNAG | 1 cut(s) | 129 |
| EciI | GGCGGA | 1 cut(s) | 308 |
| Eco105I | TACGTA | 1 cut(s) | 245 |
| Eco31I | GGTCTC | 1 cut(s) | 107 |
| Eco72I | CACGTG | 1 cut(s) | 200 |
| Eco88I | CYCGRG | 1 cut(s) | 93 |
| FaeI | CATG | 3 cut(s) | 24, 214, 266 |
| FaiI | YATR | 8 cut(s) | 22, 178, 212, 217, 264, 319, 321, 327 |
| FaqI | GGGAC | 1 cut(s) | 215 |
| FatI | CATG | 3 cut(s) | 20, 210, 262 |
| Fnu4HI | GCNGC | 2 cut(s) | 46, 291 |
| FokI | GGATG | 1 cut(s) | 232 |
| Fsp4HI | GCNGC | 2 cut(s) | 46, 291 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GluI | GCNGC | 2 cut(s) | 46, 291 |
| GsaI | CCCAGC | 1 cut(s) | 339 |
| HaeIII | GGCC | 1 cut(s) | 307 |
| HapII | CCGG | 1 cut(s) | 10 |
| Hin1II | CATG | 3 cut(s) | 24, 214, 266 |
| HinfI | GANTC | 3 cut(s) | 96, 194, 204 |
| HpaII | CCGG | 1 cut(s) | 10 |
| Hpy166II | GTNNAC | 1 cut(s) | 268 |
| Hpy188I | TCNGA | 1 cut(s) | 112 |
| Hpy188III | TCNNGA | 1 cut(s) | 10 |
| Hpy8I | GTNNAC | 1 cut(s) | 268 |
| Hpy99I | CGWCG | 2 cut(s) | 259, 313 |
| HpyCH4IV | ACGT | 4 cut(s) | 199, 240, 244, 270 |
| HpyCH4V | TGCA | 1 cut(s) | 238 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 42, 290 |
| HpyF3I | CTNAG | 1 cut(s) | 129 |
| HpySE526I | ACGT | 4 cut(s) | 199, 240, 244, 270 |
| Hsp92II | CATG | 3 cut(s) | 24, 214, 266 |
| Kpn2I | TCCGGA | 1 cut(s) | 9 |
| LpnPI | CCDG | 5 cut(s) | 23, 37, 68, 113, 321 |
| Lsp1109I | GCAGC | 1 cut(s) | 57 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MaeII | ACGT | 4 cut(s) | 199, 240, 244, 270 |
| MaeIII | GTNAC | 1 cut(s) | 245 |
| MboII | GAAGA | 1 cut(s) | 200 |
| MluCI | AATT | 3 cut(s) | 25, 150, 169 |
| MlyI | GAGTC | 2 cut(s) | 105, 213 |
| MnlI | CCTC | 5 cut(s) | 102, 128, 252, 289, 297 |
| MroI | TCCGGA | 1 cut(s) | 9 |
| MseI | TTAA | 1 cut(s) | 153 |
| MspI | CCGG | 1 cut(s) | 10 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 42, 290 |
| NlaIII | CATG | 3 cut(s) | 24, 214, 266 |
| NspI | RCATGY | 1 cut(s) | 266 |
| PaeR7I | CTCGAG | 1 cut(s) | 93 |
| PfeI | GAWTC | 1 cut(s) | 194 |
| Pfl23II | CGTACG | 1 cut(s) | 241 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 216 |
| PkrI | GCNGC | 2 cut(s) | 47, 292 |
| PleI | GAGTC | 2 cut(s) | 104, 212 |
| PmaCI | CACGTG | 1 cut(s) | 200 |
| PmlI | CACGTG | 1 cut(s) | 200 |
| PpsI | GAGTC | 2 cut(s) | 104, 212 |
| Ppu21I | YACGTR | 3 cut(s) | 200, 241, 245 |
| PspCI | CACGTG | 1 cut(s) | 200 |
| PspFI | CCCAGC | 1 cut(s) | 335 |
| PspLI | CGTACG | 1 cut(s) | 241 |
| PspXI | VCTCGAGB | 1 cut(s) | 93 |
| RsaI | GTAC | 1 cut(s) | 243 |
| RsaNI | GTAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 1 cut(s) | 153 |
| SatI | GCNGC | 2 cut(s) | 46, 291 |
| SchI | GAGTC | 2 cut(s) | 105, 213 |
| SetI | ASST | 8 cut(s) | 50, 94, 163, 202, 243, 247, 273, 337 |
| SfcI | CTRYAG | 1 cut(s) | 49 |
| Sfr274I | CTCGAG | 1 cut(s) | 93 |
| SlaI | CTCGAG | 1 cut(s) | 93 |
| SmlI | CTYRAG | 1 cut(s) | 93 |
| SmoI | CTYRAG | 1 cut(s) | 93 |
| SnaBI | TACGTA | 1 cut(s) | 245 |
| Sse9I | AATT | 3 cut(s) | 25, 150, 169 |
| SsiI | CCGC | 2 cut(s) | 290, 293 |
| SspMI | CTAG | 1 cut(s) | 285 |
| TaiI | ACGT | 4 cut(s) | 202, 243, 247, 273 |
| TaqI | TCGA | 3 cut(s) | 94, 254, 275 |
| TasI | AATT | 3 cut(s) | 25, 150, 169 |
| TauI | GCSGC | 1 cut(s) | 293 |
| TfiI | GAWTC | 1 cut(s) | 194 |
| Tru1I | TTAA | 1 cut(s) | 153 |
| Tru9I | TTAA | 1 cut(s) | 153 |
| TseI | GCWGC | 1 cut(s) | 45 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 216 |
| XceI | RCATGY | 1 cut(s) | 266 |
| XhoI | CTCGAG | 1 cut(s) | 93 |
| XspI | CTAG | 1 cut(s) | 285 |