ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 231 |
| AccIII | TCCGGA | 1 cut(s) | 301 |
| AclWI | GGATC | 1 cut(s) | 10 |
| AcuI | CTGAAG | 1 cut(s) | 213 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AjnI | CCWGG | 1 cut(s) | 204 |
| AluBI | AGCT | 2 cut(s) | 125, 341 |
| AluI | AGCT | 2 cut(s) | 125, 341 |
| Alw26I | GTCTC | 1 cut(s) | 346 |
| AlwI | GGATC | 1 cut(s) | 10 |
| Ama87I | CYCGRG | 1 cut(s) | 94 |
| Aor13HI | TCCGGA | 1 cut(s) | 301 |
| AsuC2I | CCSGG | 1 cut(s) | 35 |
| AvaI | CYCGRG | 1 cut(s) | 94 |
| BanII | GRGCYC | 1 cut(s) | 67 |
| BbsI | GAAGAC | 1 cut(s) | 128 |
| BccI | CCATC | 1 cut(s) | 286 |
| BciT130I | CCWGG | 1 cut(s) | 206 |
| BcnI | CCSGG | 1 cut(s) | 35 |
| BcoDI | GTCTC | 1 cut(s) | 346 |
| BfaI | CTAG | 1 cut(s) | 342 |
| Bme1390I | CCNGG | 2 cut(s) | 35, 206 |
| BmeT110I | CYCGRG | 1 cut(s) | 94 |
| BmrFI | CCNGG | 2 cut(s) | 35, 206 |
| BpiI | GAAGAC | 1 cut(s) | 128 |
| BpuMI | CCSGG | 1 cut(s) | 35 |
| BsaAI | YACGTR | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 3 cut(s) | 34, 204, 205 |
| BsaWI | WCCGGW | 1 cut(s) | 301 |
| BseAI | TCCGGA | 1 cut(s) | 301 |
| BseBI | CCWGG | 1 cut(s) | 206 |
| BseDI | CCNNGG | 3 cut(s) | 34, 204, 205 |
| BsiHKCI | CYCGRG | 1 cut(s) | 94 |
| BsiSI | CCGG | 2 cut(s) | 34, 302 |
| BsmAI | GTCTC | 1 cut(s) | 346 |
| BsoBI | CYCGRG | 1 cut(s) | 94 |
| Bsp1286I | GDGCHC | 1 cut(s) | 67 |
| Bsp13I | TCCGGA | 1 cut(s) | 301 |
| Bsp143I | GATC | 1 cut(s) | 15 |
| BspEI | TCCGGA | 1 cut(s) | 301 |
| BspHI | TCATGA | 1 cut(s) | 49 |
| BspPI | GGATC | 1 cut(s) | 10 |
| BssECI | CCNNGG | 3 cut(s) | 34, 204, 205 |
| BssMI | GATC | 1 cut(s) | 15 |
| Bst2UI | CCWGG | 1 cut(s) | 206 |
| BstBAI | YACGTR | 1 cut(s) | 24 |
| BstDEI | CTNAG | 1 cut(s) | 348 |
| BstKTI | GATC | 1 cut(s) | 18 |
| BstMAI | GTCTC | 1 cut(s) | 346 |
| BstMBI | GATC | 1 cut(s) | 15 |
| BstNI | CCWGG | 1 cut(s) | 206 |
| BstSCI | CCNGG | 2 cut(s) | 33, 204 |
| BstV2I | GAAGAC | 1 cut(s) | 128 |
| BstX2I | RGATCY | 1 cut(s) | 15 |
| BstYI | RGATCY | 1 cut(s) | 15 |
| BtsI | GCAGTG | 1 cut(s) | 14 |
| BtsIMutI | CAGTG | 1 cut(s) | 14 |
| CciI | TCATGA | 1 cut(s) | 49 |
| CviAII | CATG | 2 cut(s) | 50, 83 |
| CviJI | RGCY | 4 cut(s) | 65, 125, 191, 341 |
| CviKI_1 | RGCY | 4 cut(s) | 65, 125, 191, 341 |
| DdeI | CTNAG | 1 cut(s) | 348 |
| DpnI | GATC | 1 cut(s) | 17 |
| DpnII | GATC | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 67 |
| Eco32I | GATATC | 1 cut(s) | 299 |
| Eco57I | CTGAAG | 1 cut(s) | 213 |
| Eco88I | CYCGRG | 1 cut(s) | 94 |
| EcoRII | CCWGG | 1 cut(s) | 204 |
| EcoRV | GATATC | 1 cut(s) | 299 |
| EcoT38I | GRGCYC | 1 cut(s) | 67 |
| FaeI | CATG | 2 cut(s) | 53, 86 |
| FatI | CATG | 2 cut(s) | 49, 82 |
| FblI | GTMKAC | 1 cut(s) | 231 |
| FriOI | GRGCYC | 1 cut(s) | 67 |
| FspBI | CTAG | 1 cut(s) | 342 |
| HapII | CCGG | 2 cut(s) | 34, 302 |
| Hin1II | CATG | 2 cut(s) | 53, 86 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HinfI | GANTC | 4 cut(s) | 97, 133, 143, 200 |
| HpaI | GTTAAC | 1 cut(s) | 244 |
| HpaII | CCGG | 2 cut(s) | 34, 302 |
| Hpy166II | GTNNAC | 2 cut(s) | 232, 244 |
| Hpy188I | TCNGA | 2 cut(s) | 115, 351 |
| Hpy188III | TCNNGA | 3 cut(s) | 50, 140, 302 |
| Hpy8I | GTNNAC | 2 cut(s) | 232, 244 |
| HpyAV | CCTTC | 2 cut(s) | 220, 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 12, 86, 170 |
| HpyF3I | CTNAG | 1 cut(s) | 348 |
| HpySE526I | ACGT | 1 cut(s) | 23 |
| Hsp92II | CATG | 2 cut(s) | 53, 86 |
| Kpn2I | TCCGGA | 1 cut(s) | 301 |
| KspAI | GTTAAC | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 15 |
| LpnPI | CCDG | 8 cut(s) | 47, 156, 173, 191, 218, 252, 306, 315 |
| MaeI | CTAG | 1 cut(s) | 342 |
| MaeII | ACGT | 1 cut(s) | 23 |
| MaeIII | GTNAC | 1 cut(s) | 216 |
| MalI | GATC | 1 cut(s) | 17 |
| MboI | GATC | 1 cut(s) | 15 |
| MboII | GAAGA | 3 cut(s) | 128, 206, 209 |
| MflI | RGATCY | 1 cut(s) | 15 |
| MhlI | GDGCHC | 1 cut(s) | 67 |
| MluCI | AATT | 1 cut(s) | 39 |
| MlyI | GAGTC | 2 cut(s) | 106, 142 |
| MnlI | CCTC | 1 cut(s) | 273 |
| MroI | TCCGGA | 1 cut(s) | 301 |
| MseI | TTAA | 2 cut(s) | 150, 243 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| MspI | CCGG | 2 cut(s) | 34, 302 |
| MspR9I | CCNGG | 2 cut(s) | 35, 206 |
| MvaI | CCWGG | 1 cut(s) | 206 |
| NciI | CCSGG | 1 cut(s) | 35 |
| NdeII | GATC | 1 cut(s) | 15 |
| NlaIII | CATG | 2 cut(s) | 53, 86 |
| PagI | TCATGA | 1 cut(s) | 49 |
| PasI | CCCWGGG | 1 cut(s) | 205 |
| PfeI | GAWTC | 2 cut(s) | 143, 200 |
| PleI | GAGTC | 2 cut(s) | 105, 141 |
| PpsI | GAGTC | 2 cut(s) | 105, 141 |
| Ppu21I | YACGTR | 1 cut(s) | 24 |
| Psp6I | CCWGG | 1 cut(s) | 204 |
| PspGI | CCWGG | 1 cut(s) | 204 |
| PsuI | RGATCY | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 2 cut(s) | 150, 243 |
| Sau3AI | GATC | 1 cut(s) | 15 |
| SchI | GAGTC | 2 cut(s) | 106, 142 |
| ScrFI | CCNGG | 2 cut(s) | 35, 206 |
| SduI | GDGCHC | 1 cut(s) | 67 |
| SetI | ASST | 7 cut(s) | 26, 127, 231, 249, 289, 325, 343 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| Sse9I | AATT | 1 cut(s) | 39 |
| SspMI | CTAG | 1 cut(s) | 342 |
| StyD4I | CCNGG | 2 cut(s) | 33, 204 |
| TaiI | ACGT | 1 cut(s) | 26 |
| TasI | AATT | 1 cut(s) | 39 |
| TfiI | GAWTC | 2 cut(s) | 143, 200 |
| Tru1I | TTAA | 2 cut(s) | 150, 243 |
| Tru9I | TTAA | 2 cut(s) | 150, 243 |
| TscAI | CASTG | 1 cut(s) | 14 |
| TspDTI | ATGAA | 2 cut(s) | 66, 71 |
| TspRI | CASTG | 1 cut(s) | 14 |
| XmiI | GTMKAC | 1 cut(s) | 231 |
| XspI | CTAG | 1 cut(s) | 342 |