Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 130 |
| AcyI | GRCGYC | 1 cut(s) | 303 |
| AdeI | CACNNNGTG | 1 cut(s) | 75 |
| AfaI | GTAC | 1 cut(s) | 88 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw26I | GTCTC | 1 cut(s) | 226 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AspS9I | GGNCC | 1 cut(s) | 181 |
| AvaII | GGWCC | 1 cut(s) | 181 |
| BauI | CACGAG | 1 cut(s) | 150 |
| BbvI | GCAGC | 1 cut(s) | 65 |
| BceAI | ACGGC | 1 cut(s) | 195 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 155, 189 |
| BcoDI | GTCTC | 1 cut(s) | 226 |
| BfaI | CTAG | 2 cut(s) | 171, 307 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| Bme18I | GGWCC | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 1 cut(s) | 181 |
| BmsI | GCATC | 3 cut(s) | 98, 169, 175 |
| BpmI | CTGGAG | 1 cut(s) | 78 |
| BsaHI | GRCGYC | 1 cut(s) | 303 |
| BsaWI | WCCGGW | 1 cut(s) | 83 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 251, 281 |
| Bse1I | ACTGG | 1 cut(s) | 221 |
| BseGI | GGATG | 1 cut(s) | 166 |
| BseNI | ACTGG | 1 cut(s) | 221 |
| BseRI | GAGGAG | 1 cut(s) | 272 |
| BseXI | GCAGC | 1 cut(s) | 65 |
| Bsh1285I | CGRYCG | 1 cut(s) | 179 |
| BsiEI | CGRYCG | 1 cut(s) | 179 |
| BsiSI | CCGG | 2 cut(s) | 13, 84 |
| BslFI | GGGAC | 1 cut(s) | 173 |
| BsmAI | GTCTC | 1 cut(s) | 226 |
| BsmBI | CGTCTC | 1 cut(s) | 226 |
| BsmFI | GGGAC | 1 cut(s) | 173 |
| Bsp143I | GATC | 1 cut(s) | 17 |
| BspACI | CCGC | 1 cut(s) | 130 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BsrI | ACTGG | 1 cut(s) | 221 |
| BssMI | GATC | 1 cut(s) | 17 |
| BssNI | GRCGYC | 1 cut(s) | 303 |
| BssSI | CACGAG | 1 cut(s) | 150 |
| Bst2BI | CACGAG | 1 cut(s) | 150 |
| BstACI | GRCGYC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 132 |
| BstF5I | GGATG | 1 cut(s) | 166 |
| BstKTI | GATC | 1 cut(s) | 20 |
| BstMAI | GTCTC | 1 cut(s) | 226 |
| BstMBI | GATC | 1 cut(s) | 17 |
| BstMCI | CGRYCG | 1 cut(s) | 179 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 122, 131 |
| BstNSI | RCATGY | 1 cut(s) | 8 |
| BstV1I | GCAGC | 1 cut(s) | 65 |
| BtsCI | GGATG | 1 cut(s) | 166 |
| BtsI | GCAGTG | 1 cut(s) | 111 |
| BtsIMutI | CAGTG | 2 cut(s) | 111, 228 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 132 |
| CciI | TCATGA | 1 cut(s) | 274 |
| Cfr13I | GGNCC | 1 cut(s) | 181 |
| Csp6I | GTAC | 1 cut(s) | 87 |
| CviAII | CATG | 4 cut(s) | 5, 185, 227, 275 |
| CviJI | RGCY | 2 cut(s) | 56, 134 |
| CviKI_1 | RGCY | 2 cut(s) | 56, 134 |
| CviQI | GTAC | 1 cut(s) | 87 |
| DpnI | GATC | 1 cut(s) | 19 |
| DpnII | GATC | 1 cut(s) | 17 |
| DraIII | CACNNNGTG | 1 cut(s) | 75 |
| Eco47I | GGWCC | 1 cut(s) | 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| Esp3I | CGTCTC | 1 cut(s) | 226 |
| FaeI | CATG | 4 cut(s) | 8, 188, 230, 278 |
| FaiI | YATR | 5 cut(s) | 6, 47, 186, 228, 276 |
| FaqI | GGGAC | 1 cut(s) | 173 |
| FatI | CATG | 4 cut(s) | 4, 184, 226, 274 |
| FauI | CCCGC | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| FokI | GGATG | 1 cut(s) | 153 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| FspBI | CTAG | 2 cut(s) | 171, 307 |
| GluI | GCNGC | 1 cut(s) | 54 |
| GsuI | CTGGAG | 1 cut(s) | 78 |
| HapII | CCGG | 2 cut(s) | 13, 84 |
| Hin1I | GRCGYC | 1 cut(s) | 303 |
| Hin1II | CATG | 4 cut(s) | 8, 188, 230, 278 |
| HinfI | GANTC | 1 cut(s) | 80 |
| HpaII | CCGG | 2 cut(s) | 13, 84 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 150, 275 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyAV | CCTTC | 2 cut(s) | 234, 272 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 111, 160, 166, 226, 287 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 122, 131 |
| Hsp92I | GRCGYC | 1 cut(s) | 303 |
| Hsp92II | CATG | 4 cut(s) | 8, 188, 230, 278 |
| Kzo9I | GATC | 1 cut(s) | 17 |
| LpnPI | CCDG | 4 cut(s) | 26, 42, 97, 234 |
| Lsp1109I | GCAGC | 1 cut(s) | 65 |
| LweI | GCATC | 3 cut(s) | 98, 169, 175 |
| MaeI | CTAG | 2 cut(s) | 171, 307 |
| MalI | GATC | 1 cut(s) | 19 |
| MboI | GATC | 1 cut(s) | 17 |
| MboII | GAAGA | 2 cut(s) | 53, 111 |
| MluCI | AATT | 1 cut(s) | 28 |
| MmeI | TCCRAC | 3 cut(s) | 81, 159, 180 |
| MnlI | CCTC | 5 cut(s) | 53, 90, 201, 250, 292 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MspI | CCGG | 2 cut(s) | 13, 84 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 122, 131 |
| NdeII | GATC | 1 cut(s) | 17 |
| NlaIII | CATG | 4 cut(s) | 8, 188, 230, 278 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 8 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PfeI | GAWTC | 1 cut(s) | 80 |
| PflFI | GACNNNGTC | 1 cut(s) | 185 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| PspPI | GGNCC | 1 cut(s) | 181 |
| PsyI | GACNNNGTC | 1 cut(s) | 185 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 88 |
| RsaNI | GTAC | 1 cut(s) | 87 |
| SatI | GCNGC | 1 cut(s) | 54 |
| Sau3AI | GATC | 1 cut(s) | 17 |
| Sau96I | GGNCC | 1 cut(s) | 181 |
| SetI | ASST | 3 cut(s) | 58, 64, 101 |
| SfaNI | GCATC | 3 cut(s) | 98, 169, 175 |
| SinI | GGWCC | 1 cut(s) | 181 |
| SphI | GCATGC | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 28 |
| SsiI | CCGC | 1 cut(s) | 130 |
| SspMI | CTAG | 2 cut(s) | 171, 307 |
| TaqI | TCGA | 1 cut(s) | 250 |
| TaqII | GACCGA | 1 cut(s) | 165 |
| TasI | AATT | 1 cut(s) | 28 |
| TfiI | GAWTC | 1 cut(s) | 80 |
| TscAI | CASTG | 2 cut(s) | 118, 228 |
| TseI | GCWGC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 291 |
| TspRI | CASTG | 2 cut(s) | 118, 228 |
| Tth111I | GACNNNGTC | 1 cut(s) | 185 |
| VpaK11BI | GGWCC | 1 cut(s) | 181 |
| XceI | RCATGY | 1 cut(s) | 8 |
| XspI | CTAG | 2 cut(s) | 171, 307 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |