ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 100 |
| AclI | AACGTT | 1 cut(s) | 574 |
| AflIII | ACRYGT | 2 cut(s) | 244, 490 |
| AgsI | TTSAA | 3 cut(s) | 211, 353, 509 |
| AluBI | AGCT | 2 cut(s) | 410, 419 |
| AluI | AGCT | 2 cut(s) | 410, 419 |
| AoxI | GGCC | 1 cut(s) | 127 |
| ApeKI | GCWGC | 2 cut(s) | 76, 218 |
| AspS9I | GGNCC | 1 cut(s) | 592 |
| AsuHPI | GGTGA | 1 cut(s) | 41 |
| AvaII | GGWCC | 1 cut(s) | 592 |
| BbvI | GCAGC | 2 cut(s) | 63, 205 |
| BccI | CCATC | 2 cut(s) | 285, 590 |
| BfaI | CTAG | 2 cut(s) | 69, 596 |
| BfuAI | ACCTGC | 1 cut(s) | 100 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 557 |
| BisI | GCNGC | 2 cut(s) | 77, 219 |
| BlsI | GCNGC | 2 cut(s) | 78, 220 |
| Bme18I | GGWCC | 1 cut(s) | 592 |
| BmgT120I | GGNCC | 1 cut(s) | 592 |
| BsaJI | CCNNGG | 3 cut(s) | 164, 497, 552 |
| Bse1I | ACTGG | 1 cut(s) | 313 |
| Bse3DI | GCAATG | 1 cut(s) | 546 |
| BseDI | CCNNGG | 3 cut(s) | 164, 497, 552 |
| BseGI | GGATG | 2 cut(s) | 16, 58 |
| BseMI | GCAATG | 1 cut(s) | 546 |
| BseMII | CTCAG | 1 cut(s) | 600 |
| BseNI | ACTGG | 1 cut(s) | 313 |
| BseXI | GCAGC | 2 cut(s) | 63, 205 |
| BshFI | GGCC | 1 cut(s) | 129 |
| BsiSI | CCGG | 1 cut(s) | 215 |
| BslFI | GGGAC | 3 cut(s) | 190, 319, 501 |
| BsmFI | GGGAC | 3 cut(s) | 190, 319, 501 |
| BsnI | GGCC | 1 cut(s) | 129 |
| BspANI | GGCC | 1 cut(s) | 129 |
| BspCNI | CTCAG | 1 cut(s) | 601 |
| BspMI | ACCTGC | 1 cut(s) | 100 |
| BsrDI | GCAATG | 1 cut(s) | 546 |
| BsrI | ACTGG | 1 cut(s) | 313 |
| BssECI | CCNNGG | 3 cut(s) | 164, 497, 552 |
| BssT1I | CCWWGG | 2 cut(s) | 164, 497 |
| Bst4CI | ACNGT | 2 cut(s) | 181, 378 |
| Bst6I | CTCTTC | 3 cut(s) | 51, 291, 504 |
| BstDEI | CTNAG | 1 cut(s) | 609 |
| BstDSI | CCRYGG | 1 cut(s) | 552 |
| BstF5I | GGATG | 2 cut(s) | 16, 58 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 416, 557 |
| BstNSI | RCATGY | 2 cut(s) | 248, 494 |
| BstV1I | GCAGC | 2 cut(s) | 63, 205 |
| BsuRI | GGCC | 1 cut(s) | 129 |
| BtgI | CCRYGG | 1 cut(s) | 552 |
| BtsCI | GGATG | 2 cut(s) | 16, 58 |
| BtsIMutI | CAGTG | 1 cut(s) | 383 |
| BveI | ACCTGC | 1 cut(s) | 100 |
| Cfr13I | GGNCC | 1 cut(s) | 592 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 106, 141 |
| CviAII | CATG | 2 cut(s) | 245, 491 |
| CviJI | RGCY | 6 cut(s) | 76, 129, 218, 410, 419, 581 |
| CviKI_1 | RGCY | 6 cut(s) | 76, 129, 218, 410, 419, 581 |
| DdeI | CTNAG | 1 cut(s) | 609 |
| Eam1104I | CTCTTC | 3 cut(s) | 51, 291, 504 |
| EarI | CTCTTC | 3 cut(s) | 51, 291, 504 |
| Eco130I | CCWWGG | 2 cut(s) | 164, 497 |
| Eco47I | GGWCC | 1 cut(s) | 592 |
| EcoO109I | RGGNCCY | 1 cut(s) | 592 |
| EcoT14I | CCWWGG | 2 cut(s) | 164, 497 |
| ErhI | CCWWGG | 2 cut(s) | 164, 497 |
| FaeI | CATG | 2 cut(s) | 248, 494 |
| FaiI | YATR | 7 cut(s) | 8, 246, 403, 413, 444, 492, 606 |
| FaqI | GGGAC | 3 cut(s) | 190, 319, 501 |
| FatI | CATG | 2 cut(s) | 244, 490 |
| Fnu4HI | GCNGC | 2 cut(s) | 77, 219 |
| FokI | GGATG | 2 cut(s) | 23, 65 |
| Fsp4HI | GCNGC | 2 cut(s) | 77, 219 |
| FspBI | CTAG | 2 cut(s) | 69, 596 |
| GluI | GCNGC | 2 cut(s) | 77, 219 |
| HaeIII | GGCC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 215 |
| Hin1II | CATG | 2 cut(s) | 248, 494 |
| HincII | GTYRAC | 1 cut(s) | 572 |
| HindII | GTYRAC | 1 cut(s) | 572 |
| HinfI | GANTC | 1 cut(s) | 211 |
| HpaII | CCGG | 1 cut(s) | 215 |
| HphI | GGTGA | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 3 cut(s) | 314, 522, 572 |
| Hpy188I | TCNGA | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 1 cut(s) | 208 |
| Hpy8I | GTNNAC | 3 cut(s) | 314, 522, 572 |
| HpyAV | CCTTC | 1 cut(s) | 330 |
| HpyCH4III | ACNGT | 2 cut(s) | 181, 378 |
| HpyCH4IV | ACGT | 1 cut(s) | 574 |
| HpyCH4V | TGCA | 3 cut(s) | 79, 221, 529 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 416, 557 |
| HpyF3I | CTNAG | 1 cut(s) | 609 |
| HpySE526I | ACGT | 1 cut(s) | 574 |
| Hsp92II | CATG | 2 cut(s) | 248, 494 |
| LmnI | GCTCC | 1 cut(s) | 168 |
| LpnPI | CCDG | 4 cut(s) | 95, 96, 228, 294 |
| Lsp1109I | GCAGC | 2 cut(s) | 63, 205 |
| MaeI | CTAG | 2 cut(s) | 69, 596 |
| MaeII | ACGT | 1 cut(s) | 574 |
| MaeIII | GTNAC | 1 cut(s) | 272 |
| MboII | GAAGA | 4 cut(s) | 68, 272, 278, 521 |
| MluCI | AATT | 2 cut(s) | 138, 425 |
| MnlI | CCTC | 6 cut(s) | 42, 93, 294, 391, 495, 550 |
| MseI | TTAA | 4 cut(s) | 36, 132, 366, 515 |
| MslI | CAYNNNNRTG | 1 cut(s) | 447 |
| MspI | CCGG | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 416, 557 |
| NlaIII | CATG | 2 cut(s) | 248, 494 |
| NmuCI | GTSAC | 1 cut(s) | 272 |
| NspI | RCATGY | 2 cut(s) | 248, 494 |
| PciI | ACATGT | 2 cut(s) | 244, 490 |
| PfeI | GAWTC | 1 cut(s) | 211 |
| PkrI | GCNGC | 2 cut(s) | 78, 220 |
| PpuMI | RGGWCCY | 1 cut(s) | 592 |
| PscI | ACATGT | 2 cut(s) | 244, 490 |
| Psp1406I | AACGTT | 1 cut(s) | 574 |
| Psp5II | RGGWCCY | 1 cut(s) | 592 |
| PspPI | GGNCC | 1 cut(s) | 592 |
| PspPPI | RGGWCCY | 1 cut(s) | 592 |
| RseI | CAYNNNNRTG | 1 cut(s) | 447 |
| SaqAI | TTAA | 4 cut(s) | 36, 132, 366, 515 |
| SatI | GCNGC | 2 cut(s) | 77, 219 |
| Sau96I | GGNCC | 1 cut(s) | 592 |
| SetI | ASST | 8 cut(s) | 85, 104, 114, 402, 412, 421, 577, 597 |
| SinI | GGWCC | 1 cut(s) | 592 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 447 |
| Sse9I | AATT | 2 cut(s) | 138, 425 |
| SspI | AATATT | 1 cut(s) | 45 |
| SspMI | CTAG | 2 cut(s) | 69, 596 |
| StyI | CCWWGG | 2 cut(s) | 164, 497 |
| TaaI | ACNGT | 2 cut(s) | 181, 378 |
| TaiI | ACGT | 1 cut(s) | 577 |
| TasI | AATT | 2 cut(s) | 138, 425 |
| TfiI | GAWTC | 1 cut(s) | 211 |
| Tru1I | TTAA | 4 cut(s) | 36, 132, 366, 515 |
| Tru9I | TTAA | 4 cut(s) | 36, 132, 366, 515 |
| TscAI | CASTG | 1 cut(s) | 383 |
| TseFI | GTSAC | 1 cut(s) | 272 |
| TseI | GCWGC | 2 cut(s) | 76, 218 |
| Tsp45I | GTSAC | 1 cut(s) | 272 |
| TspDTI | ATGAA | 6 cut(s) | 54, 69, 242, 428, 431, 438 |
| TspGWI | ACGGA | 1 cut(s) | 569 |
| TspRI | CASTG | 1 cut(s) | 383 |
| VpaK11BI | GGWCC | 1 cut(s) | 592 |
| XceI | RCATGY | 2 cut(s) | 248, 494 |
| XspI | CTAG | 2 cut(s) | 69, 596 |