ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 130, 172 |
| AciI | CCGC | 1 cut(s) | 371 |
| AfaI | GTAC | 3 cut(s) | 154, 276, 415 |
| AluBI | AGCT | 2 cut(s) | 323, 430 |
| AluI | AGCT | 2 cut(s) | 323, 430 |
| ApeKI | GCWGC | 3 cut(s) | 178, 323, 367 |
| AspS9I | GGNCC | 2 cut(s) | 54, 96 |
| AvaII | GGWCC | 2 cut(s) | 54, 96 |
| BbvI | GCAGC | 3 cut(s) | 165, 310, 379 |
| BccI | CCATC | 1 cut(s) | 222 |
| BfmI | CTRYAG | 2 cut(s) | 179, 356 |
| BfuAI | ACCTGC | 2 cut(s) | 130, 172 |
| BisI | GCNGC | 4 cut(s) | 179, 324, 368, 371 |
| BlsI | GCNGC | 4 cut(s) | 180, 325, 369, 372 |
| Bme18I | GGWCC | 2 cut(s) | 54, 96 |
| BmgT120I | GGNCC | 2 cut(s) | 54, 96 |
| BsaJI | CCNNGG | 1 cut(s) | 99 |
| Bse1I | ACTGG | 1 cut(s) | 349 |
| BseDI | CCNNGG | 1 cut(s) | 99 |
| BseGI | GGATG | 2 cut(s) | 253, 430 |
| BseNI | ACTGG | 1 cut(s) | 349 |
| BseRI | GAGGAG | 1 cut(s) | 186 |
| BseXI | GCAGC | 3 cut(s) | 165, 310, 379 |
| BslFI | GGGAC | 1 cut(s) | 320 |
| BsmFI | GGGAC | 1 cut(s) | 320 |
| BsmI | GAATGC | 1 cut(s) | 80 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspACI | CCGC | 1 cut(s) | 371 |
| BspMAI | CTGCAG | 2 cut(s) | 183, 360 |
| BspMI | ACCTGC | 2 cut(s) | 130, 172 |
| BsrI | ACTGG | 1 cut(s) | 349 |
| BssECI | CCNNGG | 1 cut(s) | 99 |
| BssMI | GATC | 1 cut(s) | 82 |
| Bst4CI | ACNGT | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 1 cut(s) | 440 |
| BstDSI | CCRYGG | 1 cut(s) | 99 |
| BstF5I | GGATG | 2 cut(s) | 253, 430 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 364 |
| BstNSI | RCATGY | 1 cut(s) | 442 |
| BstSFI | CTRYAG | 2 cut(s) | 179, 356 |
| BstV1I | GCAGC | 3 cut(s) | 165, 310, 379 |
| BtgI | CCRYGG | 1 cut(s) | 99 |
| BtsCI | GGATG | 2 cut(s) | 253, 430 |
| BveI | ACCTGC | 2 cut(s) | 130, 172 |
| Cac8I | GCNNGC | 1 cut(s) | 440 |
| Cfr13I | GGNCC | 2 cut(s) | 54, 96 |
| Csp6I | GTAC | 3 cut(s) | 153, 275, 414 |
| CviAII | CATG | 3 cut(s) | 25, 382, 439 |
| CviJI | RGCY | 6 cut(s) | 42, 89, 285, 323, 370, 430 |
| CviKI_1 | RGCY | 6 cut(s) | 42, 89, 285, 323, 370, 430 |
| CviQI | GTAC | 3 cut(s) | 153, 275, 414 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| Eco47I | GGWCC | 2 cut(s) | 54, 96 |
| FaeI | CATG | 3 cut(s) | 28, 385, 442 |
| FaiI | YATR | 7 cut(s) | 26, 94, 165, 170, 329, 383, 440 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 63, 95 |
| FaqI | GGGAC | 1 cut(s) | 320 |
| FatI | CATG | 3 cut(s) | 24, 381, 438 |
| Fnu4HI | GCNGC | 4 cut(s) | 179, 324, 368, 371 |
| FokI | GGATG | 2 cut(s) | 240, 437 |
| Fsp4HI | GCNGC | 4 cut(s) | 179, 324, 368, 371 |
| GluI | GCNGC | 4 cut(s) | 179, 324, 368, 371 |
| Hin1II | CATG | 3 cut(s) | 28, 385, 442 |
| HinfI | GANTC | 1 cut(s) | 298 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 4 cut(s) | 58, 66, 160, 390 |
| Hpy188III | TCNNGA | 1 cut(s) | 257 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| HpyCH4III | ACNGT | 1 cut(s) | 11 |
| HpyCH4V | TGCA | 2 cut(s) | 181, 358 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 364 |
| Hsp92II | CATG | 3 cut(s) | 28, 385, 442 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LpnPI | CCDG | 6 cut(s) | 135, 167, 214, 270, 271, 330 |
| Lsp1109I | GCAGC | 3 cut(s) | 165, 310, 379 |
| MaeIII | GTNAC | 1 cut(s) | 117 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MboII | GAAGA | 2 cut(s) | 120, 343 |
| MlyI | GAGTC | 1 cut(s) | 307 |
| MnlI | CCTC | 3 cut(s) | 207, 275, 296 |
| MseI | TTAA | 2 cut(s) | 134, 336 |
| Mva1269I | GAATGC | 1 cut(s) | 80 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 364 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 3 cut(s) | 28, 385, 442 |
| NspI | RCATGY | 1 cut(s) | 442 |
| PaeI | GCATGC | 1 cut(s) | 442 |
| PctI | GAATGC | 1 cut(s) | 80 |
| PkrI | GCNGC | 4 cut(s) | 180, 325, 369, 372 |
| PleI | GAGTC | 1 cut(s) | 306 |
| PpsI | GAGTC | 1 cut(s) | 306 |
| PspPI | GGNCC | 2 cut(s) | 54, 96 |
| PstI | CTGCAG | 2 cut(s) | 183, 360 |
| RsaI | GTAC | 3 cut(s) | 154, 276, 415 |
| RsaNI | GTAC | 3 cut(s) | 153, 275, 414 |
| SaqAI | TTAA | 2 cut(s) | 134, 336 |
| SatI | GCNGC | 4 cut(s) | 179, 324, 368, 371 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| Sau96I | GGNCC | 2 cut(s) | 54, 96 |
| SchI | GAGTC | 1 cut(s) | 307 |
| SetI | ASST | 6 cut(s) | 124, 186, 205, 271, 325, 432 |
| SfcI | CTRYAG | 2 cut(s) | 179, 356 |
| SinI | GGWCC | 2 cut(s) | 54, 96 |
| SphI | GCATGC | 1 cut(s) | 442 |
| SsiI | CCGC | 1 cut(s) | 371 |
| SspI | AATATT | 1 cut(s) | 461 |
| TaaI | ACNGT | 1 cut(s) | 11 |
| TaqI | TCGA | 3 cut(s) | 85, 301, 418 |
| TatI | WGTACW | 2 cut(s) | 152, 274 |
| TauI | GCSGC | 1 cut(s) | 373 |
| Tru1I | TTAA | 2 cut(s) | 134, 336 |
| Tru9I | TTAA | 2 cut(s) | 134, 336 |
| TseI | GCWGC | 3 cut(s) | 178, 323, 367 |
| TspDTI | ATGAA | 2 cut(s) | 344, 370 |
| TspGWI | ACGGA | 2 cut(s) | 88, 401 |
| VpaK11BI | GGWCC | 2 cut(s) | 54, 96 |
| XceI | RCATGY | 1 cut(s) | 442 |