ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 230 |
| AcsI | RAATTY | 1 cut(s) | 470 |
| AgsI | TTSAA | 3 cut(s) | 130, 353, 378 |
| AjnI | CCWGG | 2 cut(s) | 138, 383 |
| AleI | CACNNNNGTG | 1 cut(s) | 218 |
| AluBI | AGCT | 1 cut(s) | 196 |
| AluI | AGCT | 1 cut(s) | 196 |
| Alw21I | GWGCWC | 2 cut(s) | 46, 63 |
| Alw26I | GTCTC | 1 cut(s) | 324 |
| Alw44I | GTGCAC | 1 cut(s) | 59 |
| ApaLI | GTGCAC | 1 cut(s) | 59 |
| ApeKI | GCWGC | 3 cut(s) | 314, 362, 458 |
| ApoI | RAATTY | 1 cut(s) | 470 |
| AseI | ATTAAT | 1 cut(s) | 347 |
| AspLEI | GCGC | 2 cut(s) | 231, 291 |
| AsuHPI | GGTGA | 1 cut(s) | 286 |
| BaeGI | GKGCMC | 1 cut(s) | 63 |
| BauI | CACGAG | 1 cut(s) | 447 |
| BbsI | GAAGAC | 1 cut(s) | 183 |
| Bbv12I | GWGCWC | 2 cut(s) | 46, 63 |
| BbvI | GCAGC | 3 cut(s) | 301, 374, 470 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 35 |
| BciT130I | CCWGG | 2 cut(s) | 140, 385 |
| BcoDI | GTCTC | 1 cut(s) | 324 |
| BfaI | CTAG | 2 cut(s) | 101, 318 |
| BfmI | CTRYAG | 1 cut(s) | 10 |
| BfoI | RGCGCY | 1 cut(s) | 292 |
| BisI | GCNGC | 3 cut(s) | 315, 363, 459 |
| BlsI | GCNGC | 3 cut(s) | 316, 364, 460 |
| Bme1390I | CCNGG | 2 cut(s) | 140, 385 |
| BmrFI | CCNGG | 2 cut(s) | 140, 385 |
| BmsI | GCATC | 1 cut(s) | 27 |
| BpiI | GAAGAC | 1 cut(s) | 183 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 164, 196, 430, 462 |
| BpuEI | CTTGAG | 1 cut(s) | 168 |
| BsaI | GGTCTC | 1 cut(s) | 324 |
| BsaJI | CCNNGG | 3 cut(s) | 139, 383, 462 |
| Bse3DI | GCAATG | 1 cut(s) | 459 |
| BseBI | CCWGG | 2 cut(s) | 140, 385 |
| BseDI | CCNNGG | 3 cut(s) | 139, 383, 462 |
| BseGI | GGATG | 1 cut(s) | 149 |
| BseMI | GCAATG | 1 cut(s) | 459 |
| BseMII | CTCAG | 2 cut(s) | 50, 252 |
| BseSI | GKGCMC | 1 cut(s) | 63 |
| BseXI | GCAGC | 3 cut(s) | 301, 374, 470 |
| BsiHKAI | GWGCWC | 2 cut(s) | 46, 63 |
| BslFI | GGGAC | 1 cut(s) | 413 |
| BsmAI | GTCTC | 1 cut(s) | 324 |
| BsmFI | GGGAC | 1 cut(s) | 413 |
| Bso31I | GGTCTC | 1 cut(s) | 324 |
| Bsp1286I | GDGCHC | 2 cut(s) | 46, 63 |
| Bsp143I | GATC | 1 cut(s) | 52 |
| Bsp19I | CCATGG | 1 cut(s) | 462 |
| BspCNI | CTCAG | 2 cut(s) | 49, 251 |
| BspHI | TCATGA | 2 cut(s) | 169, 421 |
| BspMAI | CTGCAG | 1 cut(s) | 14 |
| BspTNI | GGTCTC | 1 cut(s) | 324 |
| BsrDI | GCAATG | 1 cut(s) | 459 |
| BssECI | CCNNGG | 3 cut(s) | 139, 383, 462 |
| BssMI | GATC | 1 cut(s) | 52 |
| BssSI | CACGAG | 1 cut(s) | 447 |
| BssT1I | CCWWGG | 1 cut(s) | 462 |
| Bst2BI | CACGAG | 1 cut(s) | 447 |
| Bst2UI | CCWGG | 2 cut(s) | 140, 385 |
| BstC8I | GCNNGC | 2 cut(s) | 42, 63 |
| BstDEI | CTNAG | 2 cut(s) | 36, 238 |
| BstDSI | CCRYGG | 1 cut(s) | 462 |
| BstF5I | GGATG | 1 cut(s) | 149 |
| BstH2I | RGCGCY | 1 cut(s) | 292 |
| BstHHI | GCGC | 2 cut(s) | 231, 291 |
| BstKTI | GATC | 1 cut(s) | 55 |
| BstMAI | GTCTC | 1 cut(s) | 324 |
| BstMBI | GATC | 1 cut(s) | 52 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 458 |
| BstNI | CCWGG | 2 cut(s) | 140, 385 |
| BstNSI | RCATGY | 1 cut(s) | 221 |
| BstSCI | CCNGG | 2 cut(s) | 138, 383 |
| BstSFI | CTRYAG | 1 cut(s) | 10 |
| BstSLI | GKGCMC | 1 cut(s) | 63 |
| BstV1I | GCAGC | 3 cut(s) | 301, 374, 470 |
| BstV2I | GAAGAC | 1 cut(s) | 183 |
| BtgI | CCRYGG | 1 cut(s) | 462 |
| BtsCI | GGATG | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 2 cut(s) | 42, 63 |
| CciI | TCATGA | 2 cut(s) | 169, 421 |
| CfoI | GCGC | 2 cut(s) | 231, 291 |
| CseI | GACGC | 1 cut(s) | 263 |
| CviAII | CATG | 5 cut(s) | 170, 218, 372, 422, 463 |
| CviJI | RGCY | 8 cut(s) | 73, 138, 156, 189, 196, 314, 388, 461 |
| CviKI_1 | RGCY | 8 cut(s) | 73, 138, 156, 189, 196, 314, 388, 461 |
| DdeI | CTNAG | 2 cut(s) | 36, 238 |
| DpnI | GATC | 1 cut(s) | 54 |
| DpnII | GATC | 1 cut(s) | 52 |
| Eco130I | CCWWGG | 1 cut(s) | 462 |
| Eco31I | GGTCTC | 1 cut(s) | 324 |
| EcoRII | CCWGG | 2 cut(s) | 138, 383 |
| EcoT14I | CCWWGG | 1 cut(s) | 462 |
| ErhI | CCWWGG | 1 cut(s) | 462 |
| FaeI | CATG | 5 cut(s) | 173, 221, 375, 425, 466 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 140, 172 |
| FaqI | GGGAC | 1 cut(s) | 413 |
| FatI | CATG | 5 cut(s) | 169, 217, 371, 421, 462 |
| FauNDI | CATATG | 1 cut(s) | 416 |
| Fnu4HI | GCNGC | 3 cut(s) | 315, 363, 459 |
| FokI | GGATG | 1 cut(s) | 156 |
| Fsp4HI | GCNGC | 3 cut(s) | 315, 363, 459 |
| FspBI | CTAG | 2 cut(s) | 101, 318 |
| FspI | TGCGCA | 1 cut(s) | 230 |
| GlaI | GCGC | 2 cut(s) | 230, 290 |
| GluI | GCNGC | 3 cut(s) | 315, 363, 459 |
| HaeII | RGCGCY | 1 cut(s) | 292 |
| HgaI | GACGC | 1 cut(s) | 263 |
| HhaI | GCGC | 2 cut(s) | 231, 291 |
| Hin1II | CATG | 5 cut(s) | 173, 221, 375, 425, 466 |
| Hin6I | GCGC | 2 cut(s) | 229, 289 |
| HinP1I | GCGC | 2 cut(s) | 229, 289 |
| HincII | GTYRAC | 1 cut(s) | 25 |
| HindII | GTYRAC | 1 cut(s) | 25 |
| HinfI | GANTC | 2 cut(s) | 122, 179 |
| HpaI | GTTAAC | 1 cut(s) | 25 |
| HphI | GGTGA | 1 cut(s) | 286 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 61 |
| Hpy188III | TCNNGA | 4 cut(s) | 170, 202, 273, 422 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 61 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 4 cut(s) | 12, 61, 362, 452 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 458 |
| HpyF3I | CTNAG | 2 cut(s) | 36, 238 |
| Hsp92II | CATG | 5 cut(s) | 173, 221, 375, 425, 466 |
| HspAI | GCGC | 2 cut(s) | 229, 289 |
| KspAI | GTTAAC | 1 cut(s) | 25 |
| Kzo9I | GATC | 1 cut(s) | 52 |
| LmnI | GCTCC | 1 cut(s) | 193 |
| LpnPI | CCDG | 7 cut(s) | 41, 125, 152, 187, 370, 397, 420 |
| Lsp1109I | GCAGC | 3 cut(s) | 301, 374, 470 |
| LweI | GCATC | 1 cut(s) | 27 |
| MaeI | CTAG | 2 cut(s) | 101, 318 |
| MalI | GATC | 1 cut(s) | 54 |
| MboI | GATC | 1 cut(s) | 52 |
| MboII | GAAGA | 1 cut(s) | 188 |
| MhlI | GDGCHC | 2 cut(s) | 46, 63 |
| MluCI | AATT | 4 cut(s) | 48, 348, 378, 470 |
| MlyI | GAGTC | 2 cut(s) | 116, 173 |
| MnlI | CCTC | 6 cut(s) | 8, 146, 166, 177, 317, 456 |
| MseI | TTAA | 3 cut(s) | 24, 347, 405 |
| MslI | CAYNNNNRTG | 2 cut(s) | 218, 370 |
| MspR9I | CCNGG | 2 cut(s) | 140, 385 |
| MvaI | CCWGG | 2 cut(s) | 140, 385 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 458 |
| NcoI | CCATGG | 1 cut(s) | 462 |
| NdeI | CATATG | 1 cut(s) | 416 |
| NdeII | GATC | 1 cut(s) | 52 |
| NlaIII | CATG | 5 cut(s) | 173, 221, 375, 425, 466 |
| NsbI | TGCGCA | 1 cut(s) | 230 |
| NspI | RCATGY | 1 cut(s) | 221 |
| OliI | CACNNNNGTG | 1 cut(s) | 218 |
| PagI | TCATGA | 2 cut(s) | 169, 421 |
| PkrI | GCNGC | 3 cut(s) | 316, 364, 460 |
| PleI | GAGTC | 2 cut(s) | 116, 173 |
| PpsI | GAGTC | 2 cut(s) | 116, 173 |
| PshBI | ATTAAT | 1 cut(s) | 347 |
| Psp6I | CCWGG | 2 cut(s) | 138, 383 |
| PspGI | CCWGG | 2 cut(s) | 138, 383 |
| PstI | CTGCAG | 1 cut(s) | 14 |
| RseI | CAYNNNNRTG | 2 cut(s) | 218, 370 |
| SaqAI | TTAA | 3 cut(s) | 24, 347, 405 |
| SatI | GCNGC | 3 cut(s) | 315, 363, 459 |
| Sau3AI | GATC | 1 cut(s) | 52 |
| SchI | GAGTC | 2 cut(s) | 116, 173 |
| ScrFI | CCNGG | 2 cut(s) | 140, 385 |
| SduI | GDGCHC | 2 cut(s) | 46, 63 |
| SetI | ASST | 2 cut(s) | 198, 328 |
| SfaNI | GCATC | 1 cut(s) | 27 |
| SfcI | CTRYAG | 1 cut(s) | 10 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 218, 370 |
| SmlI | CTYRAG | 1 cut(s) | 183 |
| SmoI | CTYRAG | 1 cut(s) | 183 |
| Sse9I | AATT | 4 cut(s) | 48, 348, 378, 470 |
| SspMI | CTAG | 2 cut(s) | 101, 318 |
| StyD4I | CCNGG | 2 cut(s) | 138, 383 |
| StyI | CCWWGG | 1 cut(s) | 462 |
| TaqII | GACCGA | 1 cut(s) | 348 |
| TasI | AATT | 4 cut(s) | 48, 348, 378, 470 |
| Tru1I | TTAA | 3 cut(s) | 24, 347, 405 |
| Tru9I | TTAA | 3 cut(s) | 24, 347, 405 |
| TseI | GCWGC | 3 cut(s) | 314, 362, 458 |
| TspDTI | ATGAA | 2 cut(s) | 45, 423 |
| VneI | GTGCAC | 1 cut(s) | 59 |
| VspI | ATTAAT | 1 cut(s) | 347 |
| XapI | RAATTY | 1 cut(s) | 470 |
| XceI | RCATGY | 1 cut(s) | 221 |
| XspI | CTAG | 2 cut(s) | 101, 318 |