ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 15 |
| AciI | CCGC | 2 cut(s) | 48, 239 |
| AclWI | GGATC | 1 cut(s) | 161 |
| AflIII | ACRYGT | 1 cut(s) | 268 |
| AgsI | TTSAA | 1 cut(s) | 143 |
| AluBI | AGCT | 1 cut(s) | 23 |
| AluI | AGCT | 1 cut(s) | 23 |
| AlwI | GGATC | 1 cut(s) | 161 |
| AspLEI | GCGC | 2 cut(s) | 217, 294 |
| AsuC2I | CCSGG | 1 cut(s) | 207 |
| AsuHPI | GGTGA | 1 cut(s) | 195 |
| AsuII | TTCGAA | 1 cut(s) | 82 |
| BauI | CACGAG | 1 cut(s) | 96 |
| BbsI | GAAGAC | 1 cut(s) | 2 |
| BclI | TGATCA | 1 cut(s) | 127 |
| BcnI | CCSGG | 1 cut(s) | 207 |
| BfoI | RGCGCY | 1 cut(s) | 218 |
| Bme1390I | CCNGG | 1 cut(s) | 207 |
| BmrFI | CCNGG | 1 cut(s) | 207 |
| BpiI | GAAGAC | 1 cut(s) | 2 |
| Bpu14I | TTCGAA | 1 cut(s) | 82 |
| BpuMI | CCSGG | 1 cut(s) | 207 |
| BsaJI | CCNNGG | 1 cut(s) | 206 |
| BseDI | CCNNGG | 1 cut(s) | 206 |
| BseGI | GGATG | 2 cut(s) | 231, 238 |
| BseRI | GAGGAG | 1 cut(s) | 203 |
| Bsh1236I | CGCG | 1 cut(s) | 15 |
| BsiSI | CCGG | 1 cut(s) | 206 |
| Bsp119I | TTCGAA | 1 cut(s) | 82 |
| Bsp143I | GATC | 3 cut(s) | 73, 127, 153 |
| BspACI | CCGC | 2 cut(s) | 48, 239 |
| BspFNI | CGCG | 1 cut(s) | 15 |
| BspPI | GGATC | 1 cut(s) | 161 |
| BspT104I | TTCGAA | 1 cut(s) | 82 |
| BssECI | CCNNGG | 1 cut(s) | 206 |
| BssMI | GATC | 3 cut(s) | 73, 127, 153 |
| BssSI | CACGAG | 1 cut(s) | 96 |
| Bst2BI | CACGAG | 1 cut(s) | 96 |
| BstBI | TTCGAA | 1 cut(s) | 82 |
| BstDEI | CTNAG | 1 cut(s) | 19 |
| BstF5I | GGATG | 2 cut(s) | 231, 238 |
| BstFNI | CGCG | 1 cut(s) | 15 |
| BstH2I | RGCGCY | 1 cut(s) | 218 |
| BstHHI | GCGC | 2 cut(s) | 217, 294 |
| BstKTI | GATC | 3 cut(s) | 76, 130, 156 |
| BstMBI | GATC | 3 cut(s) | 73, 127, 153 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 54 |
| BstNSI | RCATGY | 1 cut(s) | 272 |
| BstSCI | CCNGG | 1 cut(s) | 205 |
| BstUI | CGCG | 1 cut(s) | 15 |
| BstV2I | GAAGAC | 1 cut(s) | 2 |
| BtsCI | GGATG | 2 cut(s) | 231, 238 |
| CfoI | GCGC | 2 cut(s) | 217, 294 |
| CseI | GACGC | 1 cut(s) | 4 |
| CviAII | CATG | 1 cut(s) | 269 |
| CviJI | RGCY | 1 cut(s) | 23 |
| CviKI_1 | RGCY | 1 cut(s) | 23 |
| DdeI | CTNAG | 1 cut(s) | 19 |
| DpnI | GATC | 3 cut(s) | 75, 129, 155 |
| DpnII | GATC | 3 cut(s) | 73, 127, 153 |
| FaeI | CATG | 1 cut(s) | 272 |
| FaiI | YATR | 2 cut(s) | 246, 270 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 123, 155 |
| FatI | CATG | 1 cut(s) | 268 |
| FbaI | TGATCA | 1 cut(s) | 127 |
| FokI | GGATG | 2 cut(s) | 238, 245 |
| GlaI | GCGC | 2 cut(s) | 216, 293 |
| HaeII | RGCGCY | 1 cut(s) | 218 |
| HapII | CCGG | 1 cut(s) | 206 |
| HgaI | GACGC | 1 cut(s) | 4 |
| HhaI | GCGC | 2 cut(s) | 217, 294 |
| Hin1II | CATG | 1 cut(s) | 272 |
| Hin6I | GCGC | 2 cut(s) | 215, 292 |
| HinP1I | GCGC | 2 cut(s) | 215, 292 |
| HinfI | GANTC | 4 cut(s) | 7, 79, 143, 200 |
| HpaII | CCGG | 1 cut(s) | 206 |
| HphI | GGTGA | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 2 cut(s) | 157, 223 |
| HpyAV | CCTTC | 1 cut(s) | 223 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 54 |
| HpyF3I | CTNAG | 1 cut(s) | 19 |
| Hsp92II | CATG | 1 cut(s) | 272 |
| HspAI | GCGC | 2 cut(s) | 215, 292 |
| Ksp22I | TGATCA | 1 cut(s) | 127 |
| Kzo9I | GATC | 3 cut(s) | 73, 127, 153 |
| LpnPI | CCDG | 3 cut(s) | 20, 208, 219 |
| MalI | GATC | 3 cut(s) | 75, 129, 155 |
| MboI | GATC | 3 cut(s) | 73, 127, 153 |
| MluCI | AATT | 3 cut(s) | 28, 172, 297 |
| MlyI | GAGTC | 1 cut(s) | 16 |
| MnlI | CCTC | 3 cut(s) | 105, 181, 190 |
| MseI | TTAA | 1 cut(s) | 301 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| MspI | CCGG | 1 cut(s) | 206 |
| MspR9I | CCNGG | 1 cut(s) | 207 |
| MvnI | CGCG | 1 cut(s) | 15 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 54 |
| NciI | CCSGG | 1 cut(s) | 207 |
| NdeII | GATC | 3 cut(s) | 73, 127, 153 |
| NlaIII | CATG | 1 cut(s) | 272 |
| NspI | RCATGY | 1 cut(s) | 272 |
| NspV | TTCGAA | 1 cut(s) | 82 |
| PciI | ACATGT | 1 cut(s) | 268 |
| PfeI | GAWTC | 3 cut(s) | 79, 143, 200 |
| PleI | GAGTC | 1 cut(s) | 15 |
| PpsI | GAGTC | 1 cut(s) | 15 |
| PscI | ACATGT | 1 cut(s) | 268 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 1 cut(s) | 301 |
| Sau3AI | GATC | 3 cut(s) | 73, 127, 153 |
| SchI | GAGTC | 1 cut(s) | 16 |
| ScrFI | CCNGG | 1 cut(s) | 207 |
| SetI | ASST | 2 cut(s) | 25, 97 |
| SfuI | TTCGAA | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| Sse9I | AATT | 3 cut(s) | 28, 172, 297 |
| SsiI | CCGC | 2 cut(s) | 48, 239 |
| StyD4I | CCNGG | 1 cut(s) | 205 |
| TaqI | TCGA | 2 cut(s) | 82, 265 |
| TasI | AATT | 3 cut(s) | 28, 172, 297 |
| TfiI | GAWTC | 3 cut(s) | 79, 143, 200 |
| Tru1I | TTAA | 1 cut(s) | 301 |
| Tru9I | TTAA | 1 cut(s) | 301 |
| TspDTI | ATGAA | 2 cut(s) | 233, 242 |
| TspGWI | ACGGA | 1 cut(s) | 166 |
| XceI | RCATGY | 1 cut(s) | 272 |