ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 198 |
| AccIII | TCCGGA | 1 cut(s) | 298 |
| AclWI | GGATC | 3 cut(s) | 7, 20, 290 |
| AflIII | ACRYGT | 1 cut(s) | 53 |
| AgsI | TTSAA | 2 cut(s) | 31, 148 |
| AjiI | CACGTC | 1 cut(s) | 56 |
| AjnI | CCWGG | 1 cut(s) | 289 |
| AluBI | AGCT | 1 cut(s) | 88 |
| AluI | AGCT | 1 cut(s) | 88 |
| Alw21I | GWGCWC | 1 cut(s) | 289 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| AlwI | GGATC | 3 cut(s) | 7, 20, 290 |
| Aor13HI | TCCGGA | 1 cut(s) | 298 |
| ApeKI | GCWGC | 1 cut(s) | 88 |
| AspS9I | GGNCC | 1 cut(s) | 301 |
| AvaII | GGWCC | 1 cut(s) | 301 |
| BamHI | GGATCC | 1 cut(s) | 12 |
| Bbv12I | GWGCWC | 1 cut(s) | 289 |
| BbvI | GCAGC | 1 cut(s) | 75 |
| BciT130I | CCWGG | 1 cut(s) | 291 |
| BclI | TGATCA | 1 cut(s) | 166 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BisI | GCNGC | 1 cut(s) | 89 |
| BlsI | GCNGC | 1 cut(s) | 90 |
| Bme1390I | CCNGG | 1 cut(s) | 291 |
| Bme18I | GGWCC | 1 cut(s) | 301 |
| BmgBI | CACGTC | 1 cut(s) | 56 |
| BmgT120I | GGNCC | 1 cut(s) | 301 |
| BmiI | GGNNCC | 1 cut(s) | 14 |
| BmrFI | CCNGG | 1 cut(s) | 291 |
| BmrI | ACTGGG | 1 cut(s) | 230 |
| BmsI | GCATC | 1 cut(s) | 262 |
| BmuI | ACTGGG | 1 cut(s) | 230 |
| BsaWI | WCCGGW | 2 cut(s) | 9, 298 |
| Bse1I | ACTGG | 1 cut(s) | 236 |
| BseAI | TCCGGA | 1 cut(s) | 298 |
| BseBI | CCWGG | 1 cut(s) | 291 |
| BseGI | GGATG | 2 cut(s) | 76, 228 |
| BseNI | ACTGG | 1 cut(s) | 236 |
| BseXI | GCAGC | 1 cut(s) | 75 |
| BsgI | GTGCAG | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 1 cut(s) | 289 |
| BsiSI | CCGG | 2 cut(s) | 10, 299 |
| BslFI | GGGAC | 1 cut(s) | 218 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsmBI | CGTCTC | 1 cut(s) | 107 |
| BsmFI | GGGAC | 1 cut(s) | 218 |
| Bsp1286I | GDGCHC | 1 cut(s) | 289 |
| Bsp13I | TCCGGA | 1 cut(s) | 298 |
| Bsp143I | GATC | 3 cut(s) | 12, 166, 295 |
| BspEI | TCCGGA | 1 cut(s) | 298 |
| BspLI | GGNNCC | 1 cut(s) | 14 |
| BspPI | GGATC | 3 cut(s) | 7, 20, 290 |
| BsrI | ACTGG | 1 cut(s) | 236 |
| BssMI | GATC | 3 cut(s) | 12, 166, 295 |
| Bst2UI | CCWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 1 cut(s) | 210 |
| BstF5I | GGATG | 2 cut(s) | 76, 228 |
| BstKTI | GATC | 3 cut(s) | 15, 169, 298 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 3 cut(s) | 12, 166, 295 |
| BstNI | CCWGG | 1 cut(s) | 291 |
| BstSCI | CCNGG | 1 cut(s) | 289 |
| BstV1I | GCAGC | 1 cut(s) | 75 |
| BstX2I | RGATCY | 2 cut(s) | 12, 295 |
| BstYI | RGATCY | 2 cut(s) | 12, 295 |
| BtrI | CACGTC | 1 cut(s) | 56 |
| BtsCI | GGATG | 2 cut(s) | 76, 228 |
| Cac8I | GCNNGC | 1 cut(s) | 210 |
| Cfr13I | GGNCC | 1 cut(s) | 301 |
| CpoI | CGGWCCG | 1 cut(s) | 301 |
| CspI | CGGWCCG | 1 cut(s) | 301 |
| CviAII | CATG | 2 cut(s) | 170, 276 |
| CviJI | RGCY | 3 cut(s) | 5, 88, 208 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 88, 208 |
| DpnI | GATC | 3 cut(s) | 14, 168, 297 |
| DpnII | GATC | 3 cut(s) | 12, 166, 295 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 198 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 1 cut(s) | 301 |
| EcoRII | CCWGG | 1 cut(s) | 289 |
| EcoT22I | ATGCAT | 1 cut(s) | 277 |
| Esp3I | CGTCTC | 1 cut(s) | 107 |
| FaeI | CATG | 2 cut(s) | 173, 279 |
| FaiI | YATR | 6 cut(s) | 22, 171, 220, 243, 267, 277 |
| FaqI | GGGAC | 1 cut(s) | 218 |
| FatI | CATG | 2 cut(s) | 169, 275 |
| FbaI | TGATCA | 1 cut(s) | 166 |
| Fnu4HI | GCNGC | 1 cut(s) | 89 |
| FokI | GGATG | 2 cut(s) | 83, 235 |
| Fsp4HI | GCNGC | 1 cut(s) | 89 |
| GluI | GCNGC | 1 cut(s) | 89 |
| HapII | CCGG | 2 cut(s) | 10, 299 |
| Hin1II | CATG | 2 cut(s) | 173, 279 |
| HinfI | GANTC | 2 cut(s) | 61, 140 |
| HpaII | CCGG | 2 cut(s) | 10, 299 |
| Hpy188I | TCNGA | 1 cut(s) | 60 |
| Hpy188III | TCNNGA | 1 cut(s) | 299 |
| Hpy99I | CGWCG | 1 cut(s) | 60 |
| HpyCH4III | ACNGT | 1 cut(s) | 195 |
| HpyCH4IV | ACGT | 2 cut(s) | 55, 116 |
| HpyCH4V | TGCA | 2 cut(s) | 260, 275 |
| HpySE526I | ACGT | 2 cut(s) | 55, 116 |
| Hsp92II | CATG | 2 cut(s) | 173, 279 |
| Kpn2I | TCCGGA | 1 cut(s) | 298 |
| Ksp22I | TGATCA | 1 cut(s) | 166 |
| Kzo9I | GATC | 3 cut(s) | 12, 166, 295 |
| LmnI | GCTCC | 2 cut(s) | 85, 284 |
| LpnPI | CCDG | 4 cut(s) | 23, 249, 276, 303 |
| Lsp1109I | GCAGC | 1 cut(s) | 75 |
| LweI | GCATC | 1 cut(s) | 262 |
| MaeII | ACGT | 2 cut(s) | 55, 116 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 3 cut(s) | 14, 168, 297 |
| MboI | GATC | 3 cut(s) | 12, 166, 295 |
| MboII | GAAGA | 1 cut(s) | 160 |
| MflI | RGATCY | 2 cut(s) | 12, 295 |
| MhlI | GDGCHC | 1 cut(s) | 289 |
| MluCI | AATT | 2 cut(s) | 43, 135 |
| MlyI | GAGTC | 1 cut(s) | 134 |
| MmeI | TCCRAC | 2 cut(s) | 38, 48 |
| Mph1103I | ATGCAT | 1 cut(s) | 277 |
| MroI | TCCGGA | 1 cut(s) | 298 |
| MseI | TTAA | 2 cut(s) | 153, 180 |
| MslI | CAYNNNNRTG | 1 cut(s) | 270 |
| MspI | CCGG | 2 cut(s) | 10, 299 |
| MspR9I | CCNGG | 1 cut(s) | 291 |
| MvaI | CCWGG | 1 cut(s) | 291 |
| NdeII | GATC | 3 cut(s) | 12, 166, 295 |
| NlaIII | CATG | 2 cut(s) | 173, 279 |
| NlaIV | GGNNCC | 1 cut(s) | 14 |
| NsiI | ATGCAT | 1 cut(s) | 277 |
| PfeI | GAWTC | 1 cut(s) | 61 |
| PkrI | GCNGC | 1 cut(s) | 90 |
| PleI | GAGTC | 1 cut(s) | 134 |
| PpsI | GAGTC | 1 cut(s) | 134 |
| Psp6I | CCWGG | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 289 |
| PspN4I | GGNNCC | 1 cut(s) | 14 |
| PspPI | GGNCC | 1 cut(s) | 301 |
| PsuI | RGATCY | 2 cut(s) | 12, 295 |
| RseI | CAYNNNNRTG | 1 cut(s) | 270 |
| Rsr2I | CGGWCCG | 1 cut(s) | 301 |
| RsrII | CGGWCCG | 1 cut(s) | 301 |
| SaqAI | TTAA | 2 cut(s) | 153, 180 |
| SatI | GCNGC | 1 cut(s) | 89 |
| Sau3AI | GATC | 3 cut(s) | 12, 166, 295 |
| Sau96I | GGNCC | 1 cut(s) | 301 |
| SchI | GAGTC | 1 cut(s) | 134 |
| ScrFI | CCNGG | 1 cut(s) | 291 |
| SduI | GDGCHC | 1 cut(s) | 289 |
| SetI | ASST | 3 cut(s) | 58, 90, 119 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| SinI | GGWCC | 1 cut(s) | 301 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 270 |
| Sse9I | AATT | 2 cut(s) | 43, 135 |
| StyD4I | CCNGG | 1 cut(s) | 289 |
| TaaI | ACNGT | 1 cut(s) | 195 |
| TaiI | ACGT | 2 cut(s) | 58, 119 |
| TasI | AATT | 2 cut(s) | 43, 135 |
| TfiI | GAWTC | 1 cut(s) | 61 |
| Tru1I | TTAA | 2 cut(s) | 153, 180 |
| Tru9I | TTAA | 2 cut(s) | 153, 180 |
| TseI | GCWGC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 2 cut(s) | 236, 239 |
| VpaK11BI | GGWCC | 1 cut(s) | 301 |
| Zsp2I | ATGCAT | 1 cut(s) | 277 |