ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 838 |
| AciI | CCGC | 6 cut(s) | 338, 363, 431, 552, 583, 706 |
| AcoI | YGGCCR | 2 cut(s) | 339, 432 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AcuI | CTGAAG | 1 cut(s) | 165 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 24, 830 |
| AgeI | ACCGGT | 1 cut(s) | 830 |
| AgsI | TTSAA | 7 cut(s) | 13, 169, 281, 520, 779, 911, 941 |
| AjnI | CCWGG | 3 cut(s) | 94, 483, 647 |
| AleI | CACNNNNGTG | 2 cut(s) | 323, 416 |
| AluBI | AGCT | 1 cut(s) | 934 |
| AluI | AGCT | 1 cut(s) | 934 |
| AoxI | GGCC | 3 cut(s) | 37, 339, 432 |
| ApeKI | GCWGC | 1 cut(s) | 739 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 611, 643 |
| AsiGI | ACCGGT | 1 cut(s) | 830 |
| AspS9I | GGNCC | 5 cut(s) | 37, 297, 365, 554, 651 |
| AsuC2I | CCSGG | 2 cut(s) | 295, 388 |
| AsuHPI | GGTGA | 2 cut(s) | 845, 887 |
| AvaII | GGWCC | 4 cut(s) | 297, 365, 554, 651 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 244, 276 |
| BbvI | GCAGC | 1 cut(s) | 726 |
| BccI | CCATC | 1 cut(s) | 807 |
| BciT130I | CCWGG | 3 cut(s) | 96, 485, 649 |
| BclI | TGATCA | 2 cut(s) | 349, 801 |
| BcnI | CCSGG | 2 cut(s) | 295, 388 |
| BfaI | CTAG | 2 cut(s) | 122, 476 |
| BfmI | CTRYAG | 3 cut(s) | 31, 393, 666 |
| BfuAI | ACCTGC | 1 cut(s) | 838 |
| BisI | GCNGC | 3 cut(s) | 339, 432, 740 |
| BlsI | GCNGC | 3 cut(s) | 340, 433, 741 |
| Bme1390I | CCNGG | 5 cut(s) | 96, 295, 388, 485, 649 |
| Bme18I | GGWCC | 4 cut(s) | 297, 365, 554, 651 |
| BmgT120I | GGNCC | 5 cut(s) | 37, 297, 365, 554, 651 |
| BmiI | GGNNCC | 4 cut(s) | 38, 298, 307, 400 |
| BmrFI | CCNGG | 5 cut(s) | 96, 295, 388, 485, 649 |
| BmsI | GCATC | 1 cut(s) | 134 |
| BpuMI | CCSGG | 2 cut(s) | 295, 388 |
| BsaJI | CCNNGG | 2 cut(s) | 95, 483 |
| BsaWI | WCCGGW | 1 cut(s) | 830 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 24, 830 |
| Bse118I | RCCGGY | 1 cut(s) | 830 |
| Bse1I | ACTGG | 2 cut(s) | 239, 435 |
| BseBI | CCWGG | 3 cut(s) | 96, 485, 649 |
| BseDI | CCNNGG | 2 cut(s) | 95, 483 |
| BseGI | GGATG | 2 cut(s) | 162, 818 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 24, 830 |
| BseMII | CTCAG | 5 cut(s) | 126, 241, 587, 737, 915 |
| BseNI | ACTGG | 2 cut(s) | 239, 435 |
| BseRI | GAGGAG | 1 cut(s) | 761 |
| BseXI | GCAGC | 1 cut(s) | 726 |
| BshFI | GGCC | 3 cut(s) | 39, 341, 434 |
| BshTI | ACCGGT | 1 cut(s) | 830 |
| BsiSI | CCGG | 3 cut(s) | 294, 387, 831 |
| BslFI | GGGAC | 1 cut(s) | 527 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 24, 830 |
| BsmFI | GGGAC | 1 cut(s) | 527 |
| BsmI | GAATGC | 1 cut(s) | 67 |
| BsnI | GGCC | 3 cut(s) | 39, 341, 434 |
| BspACI | CCGC | 6 cut(s) | 338, 363, 431, 552, 583, 706 |
| BspANI | GGCC | 3 cut(s) | 39, 341, 434 |
| BspCNI | CTCAG | 5 cut(s) | 125, 240, 586, 738, 916 |
| BspHI | TCATGA | 1 cut(s) | 960 |
| BspLI | GGNNCC | 4 cut(s) | 38, 298, 307, 400 |
| BspMI | ACCTGC | 1 cut(s) | 838 |
| BsrFI | RCCGGY | 1 cut(s) | 830 |
| BsrI | ACTGG | 2 cut(s) | 239, 435 |
| BssAI | RCCGGY | 1 cut(s) | 830 |
| BssECI | CCNNGG | 2 cut(s) | 95, 483 |
| Bst2UI | CCWGG | 3 cut(s) | 96, 485, 649 |
| Bst4CI | ACNGT | 3 cut(s) | 32, 203, 608 |
| Bst6I | CTCTTC | 1 cut(s) | 265 |
| BstDEI | CTNAG | 5 cut(s) | 112, 227, 573, 746, 924 |
| BstF5I | GGATG | 2 cut(s) | 162, 818 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 180, 344, 437, 892 |
| BstNI | CCWGG | 3 cut(s) | 96, 485, 649 |
| BstNSI | RCATGY | 1 cut(s) | 496 |
| BstSCI | CCNGG | 5 cut(s) | 94, 293, 386, 483, 647 |
| BstSFI | CTRYAG | 3 cut(s) | 31, 393, 666 |
| BstV1I | GCAGC | 1 cut(s) | 726 |
| BsuRI | GGCC | 3 cut(s) | 39, 341, 434 |
| BtgZI | GCGATG | 1 cut(s) | 111 |
| BtsCI | GGATG | 2 cut(s) | 162, 818 |
| BtsI | GCAGTG | 1 cut(s) | 342 |
| BtsIMutI | CAGTG | 4 cut(s) | 235, 246, 342, 442 |
| BveI | ACCTGC | 1 cut(s) | 838 |
| CciI | TCATGA | 1 cut(s) | 960 |
| Cfr10I | RCCGGY | 1 cut(s) | 830 |
| Cfr13I | GGNCC | 5 cut(s) | 37, 297, 365, 554, 651 |
| CsiI | ACCWGGT | 1 cut(s) | 647 |
| CspAI | ACCGGT | 1 cut(s) | 830 |
| CviAII | CATG | 4 cut(s) | 206, 493, 622, 961 |
| DdeI | CTNAG | 5 cut(s) | 112, 227, 573, 746, 924 |
| EaeI | YGGCCR | 2 cut(s) | 339, 432 |
| Eam1104I | CTCTTC | 1 cut(s) | 265 |
| EarI | CTCTTC | 1 cut(s) | 265 |
| Eco32I | GATATC | 1 cut(s) | 958 |
| Eco47I | GGWCC | 4 cut(s) | 297, 365, 554, 651 |
| Eco57I | CTGAAG | 1 cut(s) | 165 |
| EcoO109I | RGGNCCY | 1 cut(s) | 37 |
| EcoRII | CCWGG | 3 cut(s) | 94, 483, 647 |
| EcoRV | GATATC | 1 cut(s) | 958 |
| FaeI | CATG | 4 cut(s) | 209, 496, 625, 964 |
| FaqI | GGGAC | 1 cut(s) | 527 |
| FatI | CATG | 4 cut(s) | 205, 492, 621, 960 |
| FauI | CCCGC | 1 cut(s) | 699 |
| FbaI | TGATCA | 2 cut(s) | 349, 801 |
| Fnu4HI | GCNGC | 3 cut(s) | 339, 432, 740 |
| FokI | GGATG | 2 cut(s) | 169, 825 |
| Fsp4HI | GCNGC | 3 cut(s) | 339, 432, 740 |
| FspBI | CTAG | 2 cut(s) | 122, 476 |
| GluI | GCNGC | 3 cut(s) | 339, 432, 740 |
| HaeIII | GGCC | 3 cut(s) | 39, 341, 434 |
| HapII | CCGG | 3 cut(s) | 294, 387, 831 |
| Hin1II | CATG | 4 cut(s) | 209, 496, 625, 964 |
| HincII | GTYRAC | 1 cut(s) | 490 |
| HindII | GTYRAC | 1 cut(s) | 490 |
| HinfI | GANTC | 5 cut(s) | 133, 165, 216, 460, 820 |
| HpaI | GTTAAC | 1 cut(s) | 490 |
| HpaII | CCGG | 3 cut(s) | 294, 387, 831 |
| HphI | GGTGA | 2 cut(s) | 845, 887 |
| Hpy166II | GTNNAC | 2 cut(s) | 490, 604 |
| Hpy188I | TCNGA | 6 cut(s) | 115, 145, 576, 693, 747, 757 |
| Hpy188III | TCNNGA | 4 cut(s) | 13, 151, 726, 961 |
| Hpy8I | GTNNAC | 2 cut(s) | 490, 604 |
| HpyCH4III | ACNGT | 3 cut(s) | 32, 203, 608 |
| HpyCH4V | TGCA | 2 cut(s) | 539, 886 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 180, 344, 437, 892 |
| HpyF3I | CTNAG | 5 cut(s) | 112, 227, 573, 746, 924 |
| Hsp92II | CATG | 4 cut(s) | 209, 496, 625, 964 |
| Ksp22I | TGATCA | 2 cut(s) | 349, 801 |
| KspAI | GTTAAC | 1 cut(s) | 490 |
| LmnI | GCTCC | 2 cut(s) | 305, 398 |
| Lsp1109I | GCAGC | 1 cut(s) | 726 |
| LweI | GCATC | 1 cut(s) | 134 |
| MabI | ACCWGGT | 1 cut(s) | 647 |
| MaeI | CTAG | 2 cut(s) | 122, 476 |
| MaeIII | GTNAC | 4 cut(s) | 379, 451, 568, 733 |
| MboII | GAAGA | 3 cut(s) | 128, 252, 829 |
| MluCI | AATT | 2 cut(s) | 234, 947 |
| MlyI | GAGTC | 1 cut(s) | 210 |
| MseI | TTAA | 3 cut(s) | 42, 489, 795 |
| MslI | CAYNNNNRTG | 6 cut(s) | 273, 323, 416, 575, 873, 900 |
| MspI | CCGG | 3 cut(s) | 294, 387, 831 |
| MspR9I | CCNGG | 5 cut(s) | 96, 295, 388, 485, 649 |
| Mva1269I | GAATGC | 1 cut(s) | 67 |
| MvaI | CCWGG | 3 cut(s) | 96, 485, 649 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 180, 344, 437, 892 |
| NciI | CCSGG | 2 cut(s) | 295, 388 |
| NlaIII | CATG | 4 cut(s) | 209, 496, 625, 964 |
| NlaIV | GGNNCC | 4 cut(s) | 38, 298, 307, 400 |
| NmuCI | GTSAC | 3 cut(s) | 379, 568, 733 |
| NspI | RCATGY | 1 cut(s) | 496 |
| OliI | CACNNNNGTG | 2 cut(s) | 323, 416 |
| PagI | TCATGA | 1 cut(s) | 960 |
| PctI | GAATGC | 1 cut(s) | 67 |
| PfeI | GAWTC | 4 cut(s) | 133, 165, 460, 820 |
| PinAI | ACCGGT | 1 cut(s) | 830 |
| PkrI | GCNGC | 3 cut(s) | 340, 433, 741 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| Psp6I | CCWGG | 3 cut(s) | 94, 483, 647 |
| PspGI | CCWGG | 3 cut(s) | 94, 483, 647 |
| PspN4I | GGNNCC | 4 cut(s) | 38, 298, 307, 400 |
| PspPI | GGNCC | 5 cut(s) | 37, 297, 365, 554, 651 |
| RseI | CAYNNNNRTG | 6 cut(s) | 273, 323, 416, 575, 873, 900 |
| SaqAI | TTAA | 3 cut(s) | 42, 489, 795 |
| SatI | GCNGC | 3 cut(s) | 339, 432, 740 |
| Sau96I | GGNCC | 5 cut(s) | 37, 297, 365, 554, 651 |
| SchI | GAGTC | 1 cut(s) | 210 |
| ScrFI | CCNGG | 5 cut(s) | 96, 295, 388, 485, 649 |
| SetI | ASST | 5 cut(s) | 489, 650, 852, 877, 936 |
| SexAI | ACCWGGT | 1 cut(s) | 647 |
| SfaNI | GCATC | 1 cut(s) | 134 |
| SfcI | CTRYAG | 3 cut(s) | 31, 393, 666 |
| SinI | GGWCC | 4 cut(s) | 297, 365, 554, 651 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 273, 323, 416, 575, 873, 900 |
| Sse9I | AATT | 2 cut(s) | 234, 947 |
| SsiI | CCGC | 6 cut(s) | 338, 363, 431, 552, 583, 706 |
| SspMI | CTAG | 2 cut(s) | 122, 476 |
| StyD4I | CCNGG | 5 cut(s) | 94, 293, 386, 483, 647 |
| TaaI | ACNGT | 3 cut(s) | 32, 203, 608 |
| TaqI | TCGA | 2 cut(s) | 82, 618 |
| TasI | AATT | 2 cut(s) | 234, 947 |
| TauI | GCSGC | 2 cut(s) | 341, 434 |
| TfiI | GAWTC | 4 cut(s) | 133, 165, 460, 820 |
| Tru1I | TTAA | 3 cut(s) | 42, 489, 795 |
| Tru9I | TTAA | 3 cut(s) | 42, 489, 795 |
| TscAI | CASTG | 4 cut(s) | 235, 246, 349, 442 |
| TseFI | GTSAC | 3 cut(s) | 379, 568, 733 |
| TseI | GCWGC | 1 cut(s) | 739 |
| Tsp45I | GTSAC | 3 cut(s) | 379, 568, 733 |
| TspDTI | ATGAA | 3 cut(s) | 537, 593, 944 |
| TspGWI | ACGGA | 2 cut(s) | 239, 289 |
| TspRI | CASTG | 4 cut(s) | 235, 246, 349, 442 |
| VpaK11BI | GGWCC | 4 cut(s) | 297, 365, 554, 651 |
| XapI | RAATTY | 1 cut(s) | 234 |
| XceI | RCATGY | 1 cut(s) | 496 |
| XspI | CTAG | 2 cut(s) | 122, 476 |