Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 534 |
| AciI | CCGC | 1 cut(s) | 153 |
| AclWI | GGATC | 1 cut(s) | 357 |
| AcsI | RAATTY | 1 cut(s) | 623 |
| AcuI | CTGAAG | 1 cut(s) | 486 |
| AfaI | GTAC | 1 cut(s) | 498 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 387, 388 |
| AgsI | TTSAA | 4 cut(s) | 377, 430, 553, 578 |
| AluBI | AGCT | 3 cut(s) | 65, 215, 464 |
| AluI | AGCT | 3 cut(s) | 65, 215, 464 |
| Alw26I | GTCTC | 1 cut(s) | 310 |
| AlwI | GGATC | 1 cut(s) | 357 |
| ApoI | RAATTY | 1 cut(s) | 623 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 623 |
| AspLEI | GCGC | 2 cut(s) | 252, 315 |
| AspS9I | GGNCC | 2 cut(s) | 79, 366 |
| AsuHPI | GGTGA | 2 cut(s) | 89, 142 |
| AsuNHI | GCTAGC | 1 cut(s) | 211 |
| AvaII | GGWCC | 2 cut(s) | 79, 366 |
| BccI | CCATC | 2 cut(s) | 273, 409 |
| BceAI | ACGGC | 1 cut(s) | 18 |
| BcoDI | GTCTC | 1 cut(s) | 310 |
| BfaI | CTAG | 4 cut(s) | 122, 212, 342, 383 |
| BfoI | RGCGCY | 1 cut(s) | 316 |
| BglII | AGATCT | 1 cut(s) | 232 |
| BmcAI | AGTACT | 1 cut(s) | 498 |
| Bme18I | GGWCC | 2 cut(s) | 79, 366 |
| BmgT120I | GGNCC | 2 cut(s) | 79, 366 |
| BmiI | GGNNCC | 1 cut(s) | 512 |
| BmsI | GCATC | 3 cut(s) | 48, 134, 347 |
| BmtI | GCTAGC | 1 cut(s) | 215 |
| BpuEI | CTTGAG | 1 cut(s) | 221 |
| BsaAI | YACGTR | 1 cut(s) | 158 |
| BsaJI | CCNNGG | 2 cut(s) | 34, 407 |
| BsaWI | WCCGGW | 1 cut(s) | 513 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 288, 318 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 387, 388 |
| Bse118I | RCCGGY | 1 cut(s) | 473 |
| BseDI | CCNNGG | 2 cut(s) | 34, 407 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 387, 388 |
| BseMII | CTCAG | 1 cut(s) | 189 |
| BsiSI | CCGG | 2 cut(s) | 474, 514 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 387, 388 |
| BsmAI | GTCTC | 1 cut(s) | 310 |
| Bsp143I | GATC | 3 cut(s) | 69, 232, 349 |
| BspACI | CCGC | 1 cut(s) | 153 |
| BspCNI | CTCAG | 1 cut(s) | 190 |
| BspLI | GGNNCC | 1 cut(s) | 512 |
| BspOI | GCTAGC | 1 cut(s) | 215 |
| BspPI | GGATC | 1 cut(s) | 357 |
| BsrFI | RCCGGY | 1 cut(s) | 473 |
| BssAI | RCCGGY | 1 cut(s) | 473 |
| BssECI | CCNNGG | 2 cut(s) | 34, 407 |
| BssMI | GATC | 3 cut(s) | 69, 232, 349 |
| BssT1I | CCWWGG | 1 cut(s) | 407 |
| Bst4CI | ACNGT | 1 cut(s) | 484 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 180 |
| BstBAI | YACGTR | 1 cut(s) | 158 |
| BstC8I | GCNNGC | 3 cut(s) | 63, 172, 213 |
| BstDEI | CTNAG | 2 cut(s) | 198, 370 |
| BstDSI | CCRYGG | 1 cut(s) | 34 |
| BstH2I | RGCGCY | 1 cut(s) | 316 |
| BstHHI | GCGC | 2 cut(s) | 252, 315 |
| BstKTI | GATC | 3 cut(s) | 72, 235, 352 |
| BstMAI | GTCTC | 1 cut(s) | 310 |
| BstMBI | GATC | 3 cut(s) | 69, 232, 349 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 180, 321, 461, 470 |
| BstNSI | RCATGY | 1 cut(s) | 547 |
| BstX2I | RGATCY | 1 cut(s) | 232 |
| BstYI | RGATCY | 1 cut(s) | 232 |
| BtgI | CCRYGG | 1 cut(s) | 34 |
| Cac8I | GCNNGC | 3 cut(s) | 63, 172, 213 |
| CfoI | GCGC | 2 cut(s) | 252, 315 |
| Cfr10I | RCCGGY | 1 cut(s) | 473 |
| Cfr13I | GGNCC | 2 cut(s) | 79, 366 |
| CseI | GACGC | 1 cut(s) | 284 |
| Csp6I | GTAC | 1 cut(s) | 497 |
| CviAII | CATG | 4 cut(s) | 76, 363, 487, 544 |
| CviJI | RGCY | 7 cut(s) | 65, 196, 211, 215, 455, 464, 473 |
| CviKI_1 | RGCY | 7 cut(s) | 65, 196, 211, 215, 455, 464, 473 |
| CviQI | GTAC | 1 cut(s) | 497 |
| DdeI | CTNAG | 2 cut(s) | 198, 370 |
| DpnI | GATC | 3 cut(s) | 71, 234, 351 |
| DpnII | GATC | 3 cut(s) | 69, 232, 349 |
| Eco130I | CCWWGG | 1 cut(s) | 407 |
| Eco47I | GGWCC | 2 cut(s) | 79, 366 |
| Eco57I | CTGAAG | 1 cut(s) | 486 |
| EcoRI | GAATTC | 1 cut(s) | 623 |
| EcoT14I | CCWWGG | 1 cut(s) | 407 |
| ErhI | CCWWGG | 1 cut(s) | 407 |
| FaeI | CATG | 4 cut(s) | 79, 366, 490, 547 |
| FatI | CATG | 4 cut(s) | 75, 362, 486, 543 |
| FblI | GTMKAC | 1 cut(s) | 534 |
| FspBI | CTAG | 4 cut(s) | 122, 212, 342, 383 |
| GlaI | GCGC | 2 cut(s) | 251, 314 |
| HaeII | RGCGCY | 1 cut(s) | 316 |
| HapII | CCGG | 2 cut(s) | 474, 514 |
| HgaI | GACGC | 1 cut(s) | 284 |
| HhaI | GCGC | 2 cut(s) | 252, 315 |
| Hin1II | CATG | 4 cut(s) | 79, 366, 490, 547 |
| Hin6I | GCGC | 2 cut(s) | 250, 313 |
| HinP1I | GCGC | 2 cut(s) | 250, 313 |
| HpaII | CCGG | 2 cut(s) | 474, 514 |
| HphI | GGTGA | 2 cut(s) | 89, 142 |
| Hpy166II | GTNNAC | 1 cut(s) | 535 |
| Hpy188I | TCNGA | 4 cut(s) | 115, 232, 289, 461 |
| Hpy188III | TCNNGA | 1 cut(s) | 606 |
| Hpy8I | GTNNAC | 1 cut(s) | 535 |
| Hpy99I | CGWCG | 1 cut(s) | 509 |
| HpyAV | CCTTC | 2 cut(s) | 271, 466 |
| HpyCH4III | ACNGT | 1 cut(s) | 484 |
| HpyCH4IV | ACGT | 1 cut(s) | 157 |
| HpyCH4V | TGCA | 2 cut(s) | 188, 338 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 180, 321, 461, 470 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 370 |
| HpySE526I | ACGT | 1 cut(s) | 157 |
| Hsp92II | CATG | 4 cut(s) | 79, 366, 490, 547 |
| HspAI | GCGC | 2 cut(s) | 250, 313 |
| Kzo9I | GATC | 3 cut(s) | 69, 232, 349 |
| LmnI | GCTCC | 1 cut(s) | 461 |
| LweI | GCATC | 3 cut(s) | 48, 134, 347 |
| MaeI | CTAG | 4 cut(s) | 122, 212, 342, 383 |
| MaeII | ACGT | 1 cut(s) | 157 |
| MaeIII | GTNAC | 1 cut(s) | 478 |
| MalI | GATC | 3 cut(s) | 71, 234, 351 |
| MboI | GATC | 3 cut(s) | 69, 232, 349 |
| MboII | GAAGA | 2 cut(s) | 97, 479 |
| MflI | RGATCY | 1 cut(s) | 232 |
| MluCI | AATT | 5 cut(s) | 394, 553, 558, 578, 623 |
| MnlI | CCTC | 4 cut(s) | 105, 110, 427, 602 |
| MroXI | GAANNNNTTC | 1 cut(s) | 623 |
| MseI | TTAA | 2 cut(s) | 218, 557 |
| MslI | CAYNNNNRTG | 1 cut(s) | 485 |
| MspI | CCGG | 2 cut(s) | 474, 514 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 180, 321, 461, 470 |
| NdeII | GATC | 3 cut(s) | 69, 232, 349 |
| NheI | GCTAGC | 1 cut(s) | 211 |
| NlaIII | CATG | 4 cut(s) | 79, 366, 490, 547 |
| NlaIV | GGNNCC | 1 cut(s) | 512 |
| NmuCI | GTSAC | 1 cut(s) | 478 |
| NspI | RCATGY | 1 cut(s) | 547 |
| PdmI | GAANNNNTTC | 1 cut(s) | 623 |
| PflFI | GACNNNGTC | 1 cut(s) | 77 |
| Ppu21I | YACGTR | 1 cut(s) | 158 |
| PspN4I | GGNNCC | 1 cut(s) | 512 |
| PspPI | GGNCC | 2 cut(s) | 79, 366 |
| PsuI | RGATCY | 1 cut(s) | 232 |
| PsyI | GACNNNGTC | 1 cut(s) | 77 |
| RsaI | GTAC | 1 cut(s) | 498 |
| RsaNI | GTAC | 1 cut(s) | 497 |
| RseI | CAYNNNNRTG | 1 cut(s) | 485 |
| SaqAI | TTAA | 2 cut(s) | 218, 557 |
| Sau3AI | GATC | 3 cut(s) | 69, 232, 349 |
| Sau96I | GGNCC | 2 cut(s) | 79, 366 |
| ScaI | AGTACT | 1 cut(s) | 498 |
| SfaNI | GCATC | 3 cut(s) | 48, 134, 347 |
| SinI | GGWCC | 2 cut(s) | 79, 366 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 485 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| Sse9I | AATT | 5 cut(s) | 394, 553, 558, 578, 623 |
| SsiI | CCGC | 1 cut(s) | 153 |
| SspMI | CTAG | 4 cut(s) | 122, 212, 342, 383 |
| StyI | CCWWGG | 1 cut(s) | 407 |
| TaaI | ACNGT | 1 cut(s) | 484 |
| TaiI | ACGT | 1 cut(s) | 160 |
| TaqI | TCGA | 3 cut(s) | 72, 352, 504 |
| TasI | AATT | 5 cut(s) | 394, 553, 558, 578, 623 |
| TatI | WGTACW | 1 cut(s) | 496 |
| Tru1I | TTAA | 2 cut(s) | 218, 557 |
| Tru9I | TTAA | 2 cut(s) | 218, 557 |
| TseFI | GTSAC | 1 cut(s) | 478 |
| Tsp45I | GTSAC | 1 cut(s) | 478 |
| Tth111I | GACNNNGTC | 1 cut(s) | 77 |
| VpaK11BI | GGWCC | 2 cut(s) | 79, 366 |
| XapI | RAATTY | 1 cut(s) | 623 |
| XceI | RCATGY | 1 cut(s) | 547 |
| XmiI | GTMKAC | 1 cut(s) | 534 |
| XmnI | GAANNNNTTC | 1 cut(s) | 623 |
| XspI | CTAG | 4 cut(s) | 122, 212, 342, 383 |
| ZrmI | AGTACT | 1 cut(s) | 498 |