ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AcvI | CACGTG | 1 cut(s) | 217 |
| AfaI | GTAC | 1 cut(s) | 177 |
| AgsI | TTSAA | 4 cut(s) | 198, 347, 359, 428 |
| AluBI | AGCT | 2 cut(s) | 245, 272 |
| AluI | AGCT | 2 cut(s) | 245, 272 |
| Alw26I | GTCTC | 2 cut(s) | 145, 235 |
| ApeKI | GCWGC | 1 cut(s) | 285 |
| AseI | ATTAAT | 1 cut(s) | 291 |
| BbrPI | CACGTG | 1 cut(s) | 217 |
| BbsI | GAAGAC | 1 cut(s) | 14 |
| BbvI | GCAGC | 1 cut(s) | 272 |
| BccI | CCATC | 1 cut(s) | 125 |
| BcoDI | GTCTC | 2 cut(s) | 145, 235 |
| BisI | GCNGC | 1 cut(s) | 286 |
| BlsI | GCNGC | 1 cut(s) | 287 |
| BmsI | GCATC | 3 cut(s) | 34, 220, 352 |
| BpiI | GAAGAC | 1 cut(s) | 14 |
| BsaAI | YACGTR | 1 cut(s) | 217 |
| BseGI | GGATG | 3 cut(s) | 49, 70, 140 |
| BseXI | GCAGC | 1 cut(s) | 272 |
| BsmAI | GTCTC | 2 cut(s) | 145, 235 |
| Bsp1407I | TGTACA | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 402 |
| BsrGI | TGTACA | 1 cut(s) | 175 |
| BssMI | GATC | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 2 cut(s) | 180, 229 |
| BstAUI | TGTACA | 1 cut(s) | 175 |
| BstBAI | YACGTR | 1 cut(s) | 217 |
| BstC8I | GCNNGC | 1 cut(s) | 270 |
| BstF5I | GGATG | 3 cut(s) | 49, 70, 140 |
| BstKTI | GATC | 1 cut(s) | 405 |
| BstMAI | GTCTC | 2 cut(s) | 145, 235 |
| BstMBI | GATC | 1 cut(s) | 402 |
| BstV1I | GCAGC | 1 cut(s) | 272 |
| BstV2I | GAAGAC | 1 cut(s) | 14 |
| BtsCI | GGATG | 3 cut(s) | 49, 70, 140 |
| Cac8I | GCNNGC | 1 cut(s) | 270 |
| Csp6I | GTAC | 1 cut(s) | 176 |
| CviJI | RGCY | 3 cut(s) | 245, 272, 353 |
| CviKI_1 | RGCY | 3 cut(s) | 245, 272, 353 |
| CviQI | GTAC | 1 cut(s) | 176 |
| DpnI | GATC | 1 cut(s) | 404 |
| DpnII | GATC | 1 cut(s) | 402 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| Eco72I | CACGTG | 1 cut(s) | 217 |
| EcoT22I | ATGCAT | 1 cut(s) | 213 |
| FaiI | YATR | 5 cut(s) | 39, 41, 108, 193, 392 |
| FauNDI | CATATG | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 1 cut(s) | 286 |
| FokI | GGATG | 3 cut(s) | 56, 77, 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 286 |
| GluI | GCNGC | 1 cut(s) | 286 |
| HinfI | GANTC | 2 cut(s) | 84, 437 |
| Hpy166II | GTNNAC | 1 cut(s) | 327 |
| Hpy188I | TCNGA | 2 cut(s) | 235, 316 |
| Hpy188III | TCNNGA | 1 cut(s) | 359 |
| Hpy8I | GTNNAC | 1 cut(s) | 327 |
| Hpy99I | CGWCG | 1 cut(s) | 306 |
| HpyAV | CCTTC | 1 cut(s) | 341 |
| HpyCH4III | ACNGT | 2 cut(s) | 180, 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 216 |
| HpyCH4V | TGCA | 5 cut(s) | 185, 211, 288, 365, 380 |
| HpySE526I | ACGT | 1 cut(s) | 216 |
| Kzo9I | GATC | 1 cut(s) | 402 |
| LpnPI | CCDG | 1 cut(s) | 65 |
| Lsp1109I | GCAGC | 1 cut(s) | 272 |
| LweI | GCATC | 3 cut(s) | 34, 220, 352 |
| MaeII | ACGT | 1 cut(s) | 216 |
| MalI | GATC | 1 cut(s) | 404 |
| MboI | GATC | 1 cut(s) | 402 |
| MboII | GAAGA | 2 cut(s) | 19, 140 |
| MluCI | AATT | 3 cut(s) | 19, 188, 430 |
| MlyI | GAGTC | 1 cut(s) | 431 |
| MmeI | TCCRAC | 3 cut(s) | 42, 61, 234 |
| MnlI | CCTC | 3 cut(s) | 39, 155, 250 |
| Mph1103I | ATGCAT | 1 cut(s) | 213 |
| MseI | TTAA | 2 cut(s) | 206, 291 |
| MslI | CAYNNNNRTG | 2 cut(s) | 42, 190 |
| NdeI | CATATG | 1 cut(s) | 39 |
| NdeII | GATC | 1 cut(s) | 402 |
| NsiI | ATGCAT | 1 cut(s) | 213 |
| PfeI | GAWTC | 1 cut(s) | 84 |
| PkrI | GCNGC | 1 cut(s) | 287 |
| PleI | GAGTC | 1 cut(s) | 431 |
| PmaCI | CACGTG | 1 cut(s) | 217 |
| PmlI | CACGTG | 1 cut(s) | 217 |
| PpsI | GAGTC | 1 cut(s) | 431 |
| Ppu21I | YACGTR | 1 cut(s) | 217 |
| PshBI | ATTAAT | 1 cut(s) | 291 |
| PspCI | CACGTG | 1 cut(s) | 217 |
| RsaI | GTAC | 1 cut(s) | 177 |
| RsaNI | GTAC | 1 cut(s) | 176 |
| RseI | CAYNNNNRTG | 2 cut(s) | 42, 190 |
| SaqAI | TTAA | 2 cut(s) | 206, 291 |
| SatI | GCNGC | 1 cut(s) | 286 |
| Sau3AI | GATC | 1 cut(s) | 402 |
| SchI | GAGTC | 1 cut(s) | 431 |
| SetI | ASST | 6 cut(s) | 166, 219, 247, 261, 274, 379 |
| SfaNI | GCATC | 3 cut(s) | 34, 220, 352 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 42, 190 |
| Sse9I | AATT | 3 cut(s) | 19, 188, 430 |
| TaaI | ACNGT | 2 cut(s) | 180, 229 |
| TaiI | ACGT | 1 cut(s) | 219 |
| TasI | AATT | 3 cut(s) | 19, 188, 430 |
| TatI | WGTACW | 1 cut(s) | 175 |
| TfiI | GAWTC | 1 cut(s) | 84 |
| Tru1I | TTAA | 2 cut(s) | 206, 291 |
| Tru9I | TTAA | 2 cut(s) | 206, 291 |
| TseI | GCWGC | 1 cut(s) | 285 |
| TspDTI | ATGAA | 2 cut(s) | 185, 351 |
| VspI | ATTAAT | 1 cut(s) | 291 |
| Zsp2I | ATGCAT | 1 cut(s) | 213 |