FvH4_3g46001

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000004
Physical Location & Seq
Forward (+)
38198035 .. 38198556
522 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g46001.t1

Sequence Viewer

Length: 381 bp
ATGACCTCAGCTATGCTATACCGTGCTCTTTATGACCTGTCCCTTCATCCATTCAACTATAGCACTATATCAGGGCCATTTTGGATATTGGACCTTTGGCTGCAGATTTACTTTGTTCAATTCAGGCATCCCCAAGTCACAGATTTTCCAGATAATCAAGTACTAGGGATGGCATTCGCCGGAGTCAAAGCCCACAACCCTCTCGATTACTCCGATTGCTTCCAACATCTATACACCTTGGATGCTTCTATACTAGATGCCAGCGACCTGATGCTCAACCGAATGTATCCAGAAGCATTGACAAATAAGTTTATGTGGGAACAACTCATTCCCTTGAAGCTATGCATCTGTTTGAACAAGCTATCTCCATTGCTGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

127

Amino Acids

14.67

Weight (kDa)

5.31

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000004)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29371 FvH4_3g19371 FvH4_3g20002 FvH4_3g31374 FvH4_3g46001 FvH4_4g05271 FvH4_5g22601 FvH4_6g33652 FvH4_6g45121
rosa_chinensis RchiOBHm_Chr1g0375511 RchiOBHm_Chr2g0109801 RchiOBHm_Chr3g0457061 RchiOBHm_Chr5g0076791 RchiOBHm_Chr6g0284481
rosa_laevigata RLG00000003830
rosa_multiflora Rmu_co7976492.1_g000001 Rmu_co7985046.1_g000001 Rmu_co8000706.1_g000001 Rmu_co8017324.1_g000001 Rmu_co8045858.1_g000001 Rmu_co8050238.1_g000001 Rmu_co8054242.1_g000001 Rmu_co8054922.1_g000001 Rmu_co8097638.1_g000001 Rmu_co8127040.1_g000001 Rmu_co8144386.1_g000001 Rmu_co8164386.1_g000001 Rmu_co8200162.1_g000001 Rmu_co8205746.1_g000001 Rmu_co8217184.1_g000001 Rmu_co8226271.1_g000001 Rmu_co8229803.1_g000001 Rmu_co8238465.1_g000001 Rmu_co8253933.1_g000001 Rmu_co8274463.1_g000001 Rmu_co8283733.1_g000001 Rmu_co8295849.1_g000002 Rmu_co8300765.1_g000001 Rmu_co8310079.1_g000002 Rmu_co8328669.1_g000001 Rmu_co8346523.1_g000002 Rmu_co8351971.1_g000001 Rmu_co8366477.1_g000001 Rmu_co8369707.1_g000002 Rmu_co8372649.1_g000002 Rmu_co8377765.1_g000001 Rmu_co8380325.1_g000001 Rmu_co8390031.1_g000001 Rmu_co8391743.1_g000002 Rmu_co8401497.1_g000002 Rmu_co8409425.1_g000003 Rmu_co8410387.1_g000001 Rmu_co8410847.1_g000001 Rmu_co8428907.1_g000001 Rmu_co8431995.1_g000002 Rmu_co8436149.1_g000001 Rmu_co8437461.1_g000001 Rmu_co8443943.1_g000001 Rmu_co8445709.1_g000002 Rmu_co8451071.1_g000002 Rmu_co8451315.1_g000002 Rmu_co8455767.1_g000001 Rmu_co8456913.1_g000001 Rmu_co8469203.1_g000001 Rmu_co8470279.1_g000001 Rmu_co8472913.1_g000002 Rmu_co8472913.1_g000003 Rmu_co8486283.1_g000001 Rmu_co8493385.1_g000001 Rmu_co8493385.1_g000003 Rmu_co8497219.1_g000001 Rmu_co8497537.1_g000002 Rmu_co8522293.1_g000003 Rmu_sc0000015.1_g000030 Rmu_sc0000028.1_g000021 Rmu_sc0000063.1_g000001 Rmu_sc0000070.1_g000038 Rmu_sc0000091.1_g000033 Rmu_sc0000108.1_g000003 Rmu_sc0000108.1_g000012 Rmu_sc0000112.1_g000016 Rmu_sc0000121.1_g000028 Rmu_sc0000125.1_g000048 Rmu_sc0000125.1_g000049 Rmu_sc0000163.1_g000007 Rmu_sc0000163.1_g000008 Rmu_sc0000218.1_g000033 Rmu_sc0000236.1_g000003 Rmu_sc0000245.1_g000034 Rmu_sc0000269.1_g000002 Rmu_sc0000272.1_g000017 Rmu_sc0000280.1_g000010 Rmu_sc0000303.1_g000026 Rmu_sc0000315.1_g000041 Rmu_sc0000317.1_g000060 Rmu_sc0000342.1_g000010 Rmu_sc0000346.1_g000016 Rmu_sc0000347.1_g000008 Rmu_sc0000347.1_g000009 Rmu_sc0000363.1_g000019 Rmu_sc0000368.1_g000001 Rmu_sc0000368.1_g000020 Rmu_sc0000405.1_g000004 Rmu_sc0000405.1_g000005 Rmu_sc0000405.1_g000018 Rmu_sc0000434.1_g000024 Rmu_sc0000435.1_g000001 Rmu_sc0000435.1_g000002 Rmu_sc0000435.1_g000047 Rmu_sc0000435.1_g000065 Rmu_sc0000435.1_g000070 Rmu_sc0000435.1_g000071 Rmu_sc0000441.1_g000110 Rmu_sc0000488.1_g000006 Rmu_sc0000488.1_g000007 Rmu_sc0000488.1_g000008 Rmu_sc0000493.1_g000013 Rmu_sc0000516.1_g000061 Rmu_sc0000516.1_g000075 Rmu_sc0000533.1_g000050 Rmu_sc0000536.1_g000012 Rmu_sc0000540.1_g000011 Rmu_sc0000594.1_g000057 Rmu_sc0000595.1_g000047 Rmu_sc0000608.1_g000019 Rmu_sc0000608.1_g000021 Rmu_sc0000659.1_g000054 Rmu_sc0000659.1_g000055 Rmu_sc0000660.1_g000002 Rmu_sc0000675.1_g000004 Rmu_sc0000675.1_g000005 Rmu_sc0000680.1_g000038 Rmu_sc0000690.1_g000019 Rmu_sc0000690.1_g000021 Rmu_sc0000704.1_g000028 Rmu_sc0000704.1_g000029 Rmu_sc0000706.1_g000020 Rmu_sc0000737.1_g000006 Rmu_sc0000740.1_g000051 Rmu_sc0000740.1_g000052 Rmu_sc0000744.1_g000005 Rmu_sc0000744.1_g000070 Rmu_sc0000744.1_g000079 Rmu_sc0000745.1_g000010 Rmu_sc0000749.1_g000005 Rmu_sc0000749.1_g000012 Rmu_sc0000762.1_g000020 Rmu_sc0000762.1_g000025 Rmu_sc0000762.1_g000026 Rmu_sc0000768.1_g000011 Rmu_sc0000776.1_g000034 Rmu_sc0000780.1_g000005 Rmu_sc0000795.1_g000101 Rmu_sc0000795.1_g000120 Rmu_sc0000806.1_g000016 Rmu_sc0000826.1_g000002 Rmu_sc0000826.1_g000003 Rmu_sc0000850.1_g000009 Rmu_sc0000928.1_g000009 Rmu_sc0000928.1_g000010 Rmu_sc0000928.1_g000011 Rmu_sc0000945.1_g000028 Rmu_sc0000945.1_g000030 Rmu_sc0000948.1_g000005 Rmu_sc0000955.1_g000004 Rmu_sc0000955.1_g000005 Rmu_sc0000974.1_g000016 Rmu_sc0000982.1_g000072 Rmu_sc0001029.1_g000014 Rmu_sc0001029.1_g000015 Rmu_sc0001051.1_g000049 Rmu_sc0001069.1_g000040 Rmu_sc0001069.1_g000041 Rmu_sc0001069.1_g000042 Rmu_sc0001096.1_g000001 Rmu_sc0001103.1_g000020 Rmu_sc0001113.1_g000016 Rmu_sc0001114.1_g000004 Rmu_sc0001117.1_g000014 Rmu_sc0001132.1_g000018 Rmu_sc0001148.1_g000018 Rmu_sc0001148.1_g000019 Rmu_sc0001152.1_g000048 Rmu_sc0001170.1_g000014 Rmu_sc0001207.1_g000064 Rmu_sc0001208.1_g000016 Rmu_sc0001208.1_g000017 Rmu_sc0001208.1_g000056 Rmu_sc0001214.1_g000034 Rmu_sc0001214.1_g000036 Rmu_sc0001287.1_g000001 Rmu_sc0001301.1_g000040 Rmu_sc0001308.1_g000021 Rmu_sc0001317.1_g000006 Rmu_sc0001320.1_g000002 Rmu_sc0001347.1_g000007 Rmu_sc0001353.1_g000018 Rmu_sc0001382.1_g000008 Rmu_sc0001396.1_g000009 Rmu_sc0001464.1_g000003 Rmu_sc0001496.1_g000019 Rmu_sc0001496.1_g000021 Rmu_sc0001506.1_g000001 Rmu_sc0001516.1_g000001 Rmu_sc0001531.1_g000012 Rmu_sc0001562.1_g000029 Rmu_sc0001562.1_g000031 Rmu_sc0001617.1_g000009 Rmu_sc0001617.1_g000010 Rmu_sc0001659.1_g000039 Rmu_sc0001659.1_g000043 Rmu_sc0001692.1_g000023 Rmu_sc0001706.1_g000027 Rmu_sc0001719.1_g000028 Rmu_sc0001719.1_g000029 Rmu_sc0001738.1_g000046 Rmu_sc0001762.1_g000026 Rmu_sc0001850.1_g000036 Rmu_sc0001850.1_g000037 Rmu_sc0001869.1_g000011 Rmu_sc0001869.1_g000012 Rmu_sc0001884.1_g000016 Rmu_sc0001884.1_g000017 Rmu_sc0001887.1_g000005 Rmu_sc0001959.1_g000023 Rmu_sc0001975.1_g000002 Rmu_sc0001986.1_g000026 Rmu_sc0002008.1_g000005 Rmu_sc0002037.1_g000031 Rmu_sc0002041.1_g000018 Rmu_sc0002056.1_g000004 Rmu_sc0002056.1_g000005 Rmu_sc0002082.1_g000062 Rmu_sc0002083.1_g000014 Rmu_sc0002126.1_g000038 Rmu_sc0002126.1_g000039 Rmu_sc0002131.1_g000005 Rmu_sc0002164.1_g000026 Rmu_sc0002181.1_g000005 Rmu_sc0002184.1_g000019 Rmu_sc0002187.1_g000071 Rmu_sc0002245.1_g000008 Rmu_sc0002245.1_g000009 Rmu_sc0002259.1_g000001 Rmu_sc0002263.1_g000008 Rmu_sc0002263.1_g000009 Rmu_sc0002263.1_g000010 Rmu_sc0002272.1_g000001 Rmu_sc0002272.1_g000002 Rmu_sc0002277.1_g000034 Rmu_sc0002281.1_g000039 Rmu_sc0002322.1_g000036 Rmu_sc0002326.1_g000010 Rmu_sc0002341.1_g000008 Rmu_sc0002341.1_g000009 Rmu_sc0002352.1_g000015 Rmu_sc0002352.1_g000017 Rmu_sc0002370.1_g000007 Rmu_sc0002370.1_g000008 Rmu_sc0002401.1_g000008 Rmu_sc0002451.1_g000053 Rmu_sc0002464.1_g000014 Rmu_sc0002472.1_g000043 Rmu_sc0002481.1_g000048 Rmu_sc0002481.1_g000049 Rmu_sc0002482.1_g000028 Rmu_sc0002489.1_g000034 Rmu_sc0002506.1_g000015 Rmu_sc0002507.1_g000002 Rmu_sc0002507.1_g000003 Rmu_sc0002507.1_g000004 Rmu_sc0002509.1_g000029 Rmu_sc0002539.1_g000065 Rmu_sc0002539.1_g000083 Rmu_sc0002551.1_g000016 Rmu_sc0002551.1_g000017 Rmu_sc0002563.1_g000071 Rmu_sc0002587.1_g000030 Rmu_sc0002638.1_g000043 Rmu_sc0002662.1_g000013 Rmu_sc0002688.1_g000016 Rmu_sc0002690.1_g000017 Rmu_sc0002698.1_g000024 Rmu_sc0002702.1_g000016 Rmu_sc0002702.1_g000018 Rmu_sc0002706.1_g000024 Rmu_sc0002724.1_g000033 Rmu_sc0002727.1_g000003 Rmu_sc0002764.1_g000050 Rmu_sc0002788.1_g000004 Rmu_sc0002799.1_g000022 Rmu_sc0002801.1_g000033 Rmu_sc0002801.1_g000034 Rmu_sc0002843.1_g000019 Rmu_sc0002868.1_g000005 Rmu_sc0002877.1_g000017 Rmu_sc0002877.1_g000018 Rmu_sc0002882.1_g000014 Rmu_sc0002882.1_g000021 Rmu_sc0002883.1_g000004 Rmu_sc0002888.1_g000047 Rmu_sc0002906.1_g000014 Rmu_sc0002934.1_g000011 Rmu_sc0002938.1_g000022 Rmu_sc0002939.1_g000011 Rmu_sc0002939.1_g000012 Rmu_sc0002943.1_g000018 Rmu_sc0002983.1_g000053 Rmu_sc0002995.1_g000002 Rmu_sc0002995.1_g000031 Rmu_sc0003006.1_g000013 Rmu_sc0003008.1_g000020 Rmu_sc0003008.1_g000022 Rmu_sc0003033.1_g000020 Rmu_sc0003092.1_g000004 Rmu_sc0003098.1_g000014 Rmu_sc0003098.1_g000015 Rmu_sc0003127.1_g000010 Rmu_sc0003127.1_g000025 Rmu_sc0003142.1_g000003 Rmu_sc0003170.1_g000020 Rmu_sc0003177.1_g000037 Rmu_sc0003207.1_g000058 Rmu_sc0003218.1_g000015 Rmu_sc0003220.1_g000019 Rmu_sc0003227.1_g000016 Rmu_sc0003275.1_g000028 Rmu_sc0003291.1_g000031 Rmu_sc0003316.1_g000001 Rmu_sc0003322.1_g000010 Rmu_sc0003337.1_g000042 Rmu_sc0003379.1_g000021 Rmu_sc0003395.1_g000001 Rmu_sc0003413.1_g000032 Rmu_sc0003430.1_g000020 Rmu_sc0003454.1_g000010 Rmu_sc0003454.1_g000011 Rmu_sc0003498.1_g000010 Rmu_sc0003498.1_g000011 Rmu_sc0003500.1_g000001 Rmu_sc0003541.1_g000048 Rmu_sc0003641.1_g000032 Rmu_sc0003651.1_g000016 Rmu_sc0003651.1_g000017 Rmu_sc0003708.1_g000042 Rmu_sc0003733.1_g000025 Rmu_sc0003735.1_g000011 Rmu_sc0003735.1_g000012 Rmu_sc0003737.1_g000038 Rmu_sc0003748.1_g000010 Rmu_sc0003748.1_g000011 Rmu_sc0003801.1_g000015 Rmu_sc0003819.1_g000018 Rmu_sc0003837.1_g000003 Rmu_sc0003852.1_g000010 Rmu_sc0003890.1_g000014 Rmu_sc0003936.1_g000003 Rmu_sc0003936.1_g000004 Rmu_sc0003936.1_g000022 Rmu_sc0003978.1_g000007 Rmu_sc0003978.1_g000008 Rmu_sc0003989.1_g000004 Rmu_sc0003991.1_g000002 Rmu_sc0004001.1_g000003 Rmu_sc0004001.1_g000004 Rmu_sc0004035.1_g000024 Rmu_sc0004059.1_g000020 Rmu_sc0004065.1_g000010 Rmu_sc0004065.1_g000011 Rmu_sc0004092.1_g000010 Rmu_sc0004101.1_g000017 Rmu_sc0004101.1_g000018 Rmu_sc0004128.1_g000010 Rmu_sc0004165.1_g000071 Rmu_sc0004168.1_g000066 Rmu_sc0004168.1_g000067 Rmu_sc0004180.1_g000022 Rmu_sc0004189.1_g000023 Rmu_sc0004234.1_g000003 Rmu_sc0004243.1_g000007 Rmu_sc0004318.1_g000038 Rmu_sc0004322.1_g000009 Rmu_sc0004322.1_g000010 Rmu_sc0004336.1_g000048 Rmu_sc0004336.1_g000049 Rmu_sc0004354.1_g000018 Rmu_sc0004404.1_g000014 Rmu_sc0004448.1_g000006 Rmu_sc0004448.1_g000008 Rmu_sc0004502.1_g000012 Rmu_sc0004515.1_g000015 Rmu_sc0004515.1_g000016 Rmu_sc0004542.1_g000024 Rmu_sc0004542.1_g000025 Rmu_sc0004555.1_g000013 Rmu_sc0004555.1_g000015 Rmu_sc0004567.1_g000007 Rmu_sc0004583.1_g000010 Rmu_sc0004594.1_g000016 Rmu_sc0004602.1_g000018 Rmu_sc0004602.1_g000019 Rmu_sc0004627.1_g000001 Rmu_sc0004627.1_g000002 Rmu_sc0004707.1_g000001 Rmu_sc0004718.1_g000007 Rmu_sc0004748.1_g000002 Rmu_sc0004820.1_g000010 Rmu_sc0004862.1_g000004 Rmu_sc0004862.1_g000005 Rmu_sc0004888.1_g000008 Rmu_sc0004888.1_g000009 Rmu_sc0004910.1_g000008 Rmu_sc0004928.1_g000016 Rmu_sc0004941.1_g000036 Rmu_sc0005003.1_g000001 Rmu_sc0005008.1_g000009 Rmu_sc0005008.1_g000031 Rmu_sc0005008.1_g000032 Rmu_sc0005015.1_g000011 Rmu_sc0005048.1_g000013 Rmu_sc0005093.1_g000009 Rmu_sc0005093.1_g000011 Rmu_sc0005112.1_g000014 Rmu_sc0005125.1_g000024 Rmu_sc0005125.1_g000026 Rmu_sc0005143.1_g000001 Rmu_sc0005144.1_g000031 Rmu_sc0005147.1_g000005 Rmu_sc0005223.1_g000023 Rmu_sc0005266.1_g000016 Rmu_sc0005294.1_g000035 Rmu_sc0005322.1_g000005 Rmu_sc0005433.1_g000003 Rmu_sc0005439.1_g000013 Rmu_sc0005454.1_g000004 Rmu_sc0005469.1_g000002 Rmu_sc0005539.1_g000015 Rmu_sc0005539.1_g000017 Rmu_sc0005564.1_g000006 Rmu_sc0005564.1_g000007 Rmu_sc0005600.1_g000005 Rmu_sc0005627.1_g000010 Rmu_sc0005627.1_g000013 Rmu_sc0005652.1_g000017 Rmu_sc0005659.1_g000009 Rmu_sc0005664.1_g000017 Rmu_sc0005664.1_g000018 Rmu_sc0005664.1_g000019 Rmu_sc0005770.1_g000021 Rmu_sc0005840.1_g000006 Rmu_sc0005840.1_g000008 Rmu_sc0005911.1_g000013 Rmu_sc0005911.1_g000014 Rmu_sc0005911.1_g000015 Rmu_sc0005929.1_g000021 Rmu_sc0005982.1_g000011 Rmu_sc0005982.1_g000012 Rmu_sc0006021.1_g000013 Rmu_sc0006021.1_g000014 Rmu_sc0006050.1_g000010 Rmu_sc0006059.1_g000026 Rmu_sc0006059.1_g000053 Rmu_sc0006085.1_g000005 Rmu_sc0006085.1_g000006 Rmu_sc0006102.1_g000013 Rmu_sc0006129.1_g000014 Rmu_sc0006129.1_g000015 Rmu_sc0006156.1_g000001 Rmu_sc0006168.1_g000010 Rmu_sc0006168.1_g000011 Rmu_sc0006228.1_g000003 Rmu_sc0006244.1_g000023 Rmu_sc0006244.1_g000024 Rmu_sc0006252.1_g000010 Rmu_sc0006300.1_g000009 Rmu_sc0006343.1_g000014 Rmu_sc0006343.1_g000015 Rmu_sc0006372.1_g000004 Rmu_sc0006388.1_g000021 Rmu_sc0006447.1_g000005 Rmu_sc0006583.1_g000006 Rmu_sc0006624.1_g000014 Rmu_sc0006638.1_g000009 Rmu_sc0006674.1_g000017 Rmu_sc0006674.1_g000018 Rmu_sc0006674.1_g000028 Rmu_sc0006674.1_g000031 Rmu_sc0006767.1_g000012 Rmu_sc0006803.1_g000060 Rmu_sc0006823.1_g000003 Rmu_sc0006823.1_g000004 Rmu_sc0006961.1_g000001 Rmu_sc0006986.1_g000005 Rmu_sc0007018.1_g000003 Rmu_sc0007018.1_g000005 Rmu_sc0007032.1_g000013 Rmu_sc0007077.1_g000008 Rmu_sc0007142.1_g000013 Rmu_sc0007142.1_g000017 Rmu_sc0007221.1_g000011 Rmu_sc0007242.1_g000003 Rmu_sc0007247.1_g000001 Rmu_sc0007248.1_g000009 Rmu_sc0007282.1_g000001 Rmu_sc0007320.1_g000009 Rmu_sc0007477.1_g000009 Rmu_sc0007505.1_g000001 Rmu_sc0007509.1_g000008 Rmu_sc0007511.1_g000006 Rmu_sc0007558.1_g000008 Rmu_sc0007612.1_g000021 Rmu_sc0007612.1_g000033 Rmu_sc0007612.1_g000034 Rmu_sc0007642.1_g000004 Rmu_sc0007678.1_g000010 Rmu_sc0007777.1_g000033 Rmu_sc0007786.1_g000001 Rmu_sc0007826.1_g000017 Rmu_sc0007854.1_g000002 Rmu_sc0007920.1_g000027 Rmu_sc0007920.1_g000028 Rmu_sc0007985.1_g000014 Rmu_sc0007985.1_g000016 Rmu_sc0008019.1_g000021 Rmu_sc0008019.1_g000028 Rmu_sc0008184.1_g000012 Rmu_sc0008240.1_g000006 Rmu_sc0008245.1_g000008 Rmu_sc0008245.1_g000010 Rmu_sc0008296.1_g000001 Rmu_sc0008382.1_g000003 Rmu_sc0008512.1_g000002 Rmu_sc0008524.1_g000001 Rmu_sc0008562.1_g000001 Rmu_sc0008676.1_g000010 Rmu_sc0008872.1_g000008 Rmu_sc0008872.1_g000009 Rmu_sc0008978.1_g000002 Rmu_sc0009057.1_g000005 Rmu_sc0009057.1_g000006 Rmu_sc0009162.1_g000002 Rmu_sc0009206.1_g000005 Rmu_sc0009240.1_g000014 Rmu_sc0009253.1_g000013 Rmu_sc0009395.1_g000020 Rmu_sc0009395.1_g000021 Rmu_sc0009395.1_g000038 Rmu_sc0009415.1_g000002 Rmu_sc0009639.1_g000017 Rmu_sc0009695.1_g000003 Rmu_sc0009844.1_g000011 Rmu_sc0009862.1_g000019 Rmu_sc0009883.1_g000010 Rmu_sc0010213.1_g000002 Rmu_sc0010226.1_g000010 Rmu_sc0010226.1_g000011 Rmu_sc0010265.1_g000006 Rmu_sc0010272.1_g000013 Rmu_sc0010313.1_g000007 Rmu_sc0010338.1_g000007 Rmu_sc0010426.1_g000024 Rmu_sc0010426.1_g000025 Rmu_sc0010444.1_g000005 Rmu_sc0010445.1_g000007 Rmu_sc0010445.1_g000008 Rmu_sc0010454.1_g000005 Rmu_sc0010483.1_g000025 Rmu_sc0010543.1_g000013 Rmu_sc0010616.1_g000014 Rmu_sc0010616.1_g000016 Rmu_sc0010674.1_g000007 Rmu_sc0010674.1_g000008 Rmu_sc0011079.1_g000005 Rmu_sc0011136.1_g000016 Rmu_sc0011142.1_g000006 Rmu_sc0011142.1_g000007 Rmu_sc0011197.1_g000008 Rmu_sc0011424.1_g000030 Rmu_sc0011688.1_g000003 Rmu_sc0011803.1_g000004 Rmu_sc0011870.1_g000014 Rmu_sc0011870.1_g000015 Rmu_sc0012193.1_g000001 Rmu_sc0012322.1_g000010 Rmu_sc0012344.1_g000004 Rmu_sc0012345.1_g000001 Rmu_sc0012403.1_g000022 Rmu_sc0012533.1_g000001 Rmu_sc0012674.1_g000010 Rmu_sc0012674.1_g000011 Rmu_sc0012685.1_g000003 Rmu_sc0012734.1_g000005 Rmu_sc0013216.1_g000016 Rmu_sc0013339.1_g000001 Rmu_sc0014606.1_g000001 Rmu_sc0014606.1_g000002 Rmu_sc0014620.1_g000020 Rmu_sc0014728.1_g000002 Rmu_sc0014728.1_g000004 Rmu_sc0014811.1_g000005 Rmu_sc0014811.1_g000006 Rmu_sc0014893.1_g000008 Rmu_sc0014956.1_g000001 Rmu_sc0015421.1_g000002 Rmu_sc0015486.1_g000001 Rmu_sc0015525.1_g000003 Rmu_sc0015603.1_g000007 Rmu_sc0015771.1_g000007 Rmu_sc0015844.1_g000003 Rmu_sc0015844.1_g000005 Rmu_sc0015900.1_g000001 Rmu_sc0016141.1_g000004 Rmu_sc0016141.1_g000005 Rmu_sc0016344.1_g000002 Rmu_sc0016344.1_g000003 Rmu_sc0016387.1_g000016 Rmu_sc0016387.1_g000018 Rmu_sc0016568.1_g000001 Rmu_sc0016595.1_g000002 Rmu_sc0016612.1_g000003 Rmu_sc0016612.1_g000005 Rmu_sc0016796.1_g000001 Rmu_sc0017178.1_g000005 Rmu_sc0017267.1_g000001 Rmu_sc0017707.1_g000001 Rmu_sc0017841.1_g000001 Rmu_sc0018132.1_g000001 Rmu_sc0018324.1_g000001 Rmu_sc0018324.1_g000002 Rmu_sc0018537.1_g000006 Rmu_sc0018537.1_g000007 Rmu_sc0018928.1_g000002 Rmu_sc0020333.1_g000004 Rmu_sc0020936.1_g000002 Rmu_sc0021624.1_g000001 Rmu_sc0021885.1_g000002 Rmu_sc0021992.1_g000003 Rmu_sc0022376.1_g000001 Rmu_sc0023644.1_g000001 Rmu_sc0024195.1_g000005 Rmu_sc0025816.1_g000001 Rmu_sc0026167.1_g000001 Rmu_sc0026393.1_g000001 Rmu_sc0026394.1_g000001 Rmu_sc0027295.1_g000001 Rmu_sc0027295.1_g000003 Rmu_sc0027634.1_g000002 Rmu_sc0027889.1_g000001 Rmu_sc0028790.1_g000001 Rmu_sc0030077.1_g000001 Rmu_sc0030177.1_g000002 Rmu_sc0030806.1_g000001 Rmu_sc0031804.1_g000001 Rmu_sc0031834.1_g000001 Rmu_sc0032094.1_g000001 Rmu_sc0033744.1_g000002 Rmu_sc0034307.1_g000001 Rmu_sc0035076.1_g000001 Rmu_sc0035153.1_g000001 Rmu_sc0035629.1_g000002 Rmu_sc0035659.1_g000001 Rmu_sc0036479.1_g000002 Rmu_sc0039545.1_g000001 Rmu_sc0039844.1_g000001 Rmu_sc0039957.1_g000001 Rmu_sc0040334.1_g000001 Rmu_sc0040734.1_g000001 Rmu_sc0040735.1_g000001 Rmu_sc0041020.1_g000004 Rmu_ssc0000008.1_g000023 Rmu_ssc0000092.1_g000017 Rmu_ssc0000152.1_g000024 Rmu_ssc0000173.1_g000011 Rmu_ssc0000173.1_g000012 Rmu_ssc0000184.1_g000020 Rmu_ssc0000233.1_g000015 Rmu_ssc0000233.1_g000017 Rmu_ssc0000287.1_g000002 Rmu_ssc0000287.1_g000003 Rmu_ssc0000343.1_g000005 Rmu_ssc0000357.1_g000034 Rmu_ssc0000393.1_g000010 Rmu_ssc0000398.1_g000009 Rmu_ssc0000398.1_g000011 Rmu_ssc0000400.1_g000078 Rmu_ssc0000400.1_g000079 Rmu_ssc0000403.1_g000011 Rmu_ssc0000421.1_g000050 Rmu_ssc0000421.1_g000074 Rmu_ssc0000459.1_g000015 Rmu_ssc0000459.1_g000016 Rmu_ssc0000470.1_g000014 Rmu_ssc0000479.1_g000010 Rmu_ssc0000480.1_g000041 Rmu_ssc0000480.1_g000042
rosa_roxburghii Rroxscaffold_154G00448000 Rroxscaffold_166G00440690 Rroxscaffold_174G00435250 Rroxscaffold_174G00435260 Rroxscaffold_175G00431940 Rroxscaffold_176G00431250 Rroxscaffold_176G00431260 Rroxscaffold_178G00437290 Rroxscaffold_1G00001810 Rroxscaffold_1G00002150 Rroxscaffold_1G00003500 Rroxscaffold_1G00003510 Rroxscaffold_1G00003520 Rroxscaffold_1G00003680 Rroxscaffold_1G00003690 Rroxscaffold_1G00003700 Rroxscaffold_1G00003730 Rroxscaffold_1G00003740 Rroxscaffold_1G00003850 Rroxscaffold_1G00004420 Rroxscaffold_1G00004430 Rroxscaffold_1G00008650 Rroxscaffold_1G00011250 Rroxscaffold_1G00012150 Rroxscaffold_1G00016630 Rroxscaffold_1G00020720 Rroxscaffold_1G00023550 Rroxscaffold_1G00025270 Rroxscaffold_1G00025540 Rroxscaffold_1G00029810 Rroxscaffold_1G00033580 Rroxscaffold_1G00049290 Rroxscaffold_1G00049300 Rroxscaffold_1G00050620 Rroxscaffold_1G00060270 Rroxscaffold_1G00060280 Rroxscaffold_1G00060290 Rroxscaffold_1G00060890 Rroxscaffold_1G00071760 Rroxscaffold_1G00071840 Rroxscaffold_1G00075870 Rroxscaffold_2G00077720 Rroxscaffold_2G00077730 Rroxscaffold_2G00085640 Rroxscaffold_2G00085650 Rroxscaffold_2G00086390 Rroxscaffold_2G00089930 Rroxscaffold_2G00089940 Rroxscaffold_2G00090540 Rroxscaffold_2G00092340 Rroxscaffold_2G00094020 Rroxscaffold_2G00094030 Rroxscaffold_2G00094040 Rroxscaffold_2G00097080 Rroxscaffold_2G00111460 Rroxscaffold_2G00112010 Rroxscaffold_2G00112020 Rroxscaffold_2G00112030 Rroxscaffold_2G00112080 Rroxscaffold_2G00112690 Rroxscaffold_2G00127810 Rroxscaffold_2G00127820 Rroxscaffold_2G00128660 Rroxscaffold_2G00128670 Rroxscaffold_2G00128700 Rroxscaffold_2G00128710 Rroxscaffold_2G00128720 Rroxscaffold_2G00136260 Rroxscaffold_2G00136270 Rroxscaffold_2G00155900 Rroxscaffold_3G00218390 Rroxscaffold_3G00219550 Rroxscaffold_3G00220330 Rroxscaffold_3G00221530 Rroxscaffold_3G00223210 Rroxscaffold_3G00223220 Rroxscaffold_3G00223230 Rroxscaffold_3G00223510 Rroxscaffold_3G00230960 Rroxscaffold_3G00232420 Rroxscaffold_3G00234100 Rroxscaffold_3G00234110 Rroxscaffold_3G00236810 Rroxscaffold_3G00241390 Rroxscaffold_3G00241400 Rroxscaffold_3G00244130 Rroxscaffold_3G00244140 Rroxscaffold_3G00249360 Rroxscaffold_3G00254460 Rroxscaffold_3G00254470 Rroxscaffold_3G00258460 Rroxscaffold_3G00259090 Rroxscaffold_3G00261260 Rroxscaffold_3G00272020 Rroxscaffold_3G00272030 Rroxscaffold_4G00282060 Rroxscaffold_4G00282070 Rroxscaffold_4G00294360 Rroxscaffold_4G00295640 Rroxscaffold_4G00298170 Rroxscaffold_4G00298180 Rroxscaffold_4G00298490 Rroxscaffold_4G00298500 Rroxscaffold_4G00303100 Rroxscaffold_4G00304240 Rroxscaffold_4G00304250 Rroxscaffold_4G00304260 Rroxscaffold_4G00306450 Rroxscaffold_4G00306460 Rroxscaffold_4G00306570 Rroxscaffold_4G00306660 Rroxscaffold_4G00310660 Rroxscaffold_4G00316020 Rroxscaffold_4G00316340 Rroxscaffold_4G00322240 Rroxscaffold_4G00322250 Rroxscaffold_4G00324180 Rroxscaffold_4G00324190 Rroxscaffold_4G00324700 Rroxscaffold_4G00324710 Rroxscaffold_4G00324910 Rroxscaffold_4G00326890 Rroxscaffold_4G00326900 Rroxscaffold_4G00326910 Rroxscaffold_4G00326920 Rroxscaffold_4G00329710 Rroxscaffold_4G00330350 Rroxscaffold_4G00331240 Rroxscaffold_4G00331250 Rroxscaffold_4G00331260 Rroxscaffold_4G00331730 Rroxscaffold_5G00336210 Rroxscaffold_5G00338550 Rroxscaffold_5G00340490 Rroxscaffold_5G00340500 Rroxscaffold_5G00341690 Rroxscaffold_5G00341790 Rroxscaffold_5G00341910 Rroxscaffold_5G00345470 Rroxscaffold_5G00345480 Rroxscaffold_5G00345490 Rroxscaffold_5G00348870 Rroxscaffold_5G00350140 Rroxscaffold_5G00350150 Rroxscaffold_5G00350160 Rroxscaffold_5G00353430 Rroxscaffold_5G00353560 Rroxscaffold_5G00354550 Rroxscaffold_5G00356530 Rroxscaffold_5G00356540 Rroxscaffold_5G00356550 Rroxscaffold_5G00359470 Rroxscaffold_5G00359760 Rroxscaffold_5G00359770 Rroxscaffold_5G00378060 Rroxscaffold_5G00381700 Rroxscaffold_5G00385170 Rroxscaffold_5G00385180 Rroxscaffold_5G00387490 Rroxscaffold_5G00387500 Rroxscaffold_6G00388020 Rroxscaffold_6G00389410 Rroxscaffold_6G00389420 Rroxscaffold_6G00389430 Rroxscaffold_6G00389550 Rroxscaffold_6G00389800 Rroxscaffold_6G00391020 Rroxscaffold_6G00391030 Rroxscaffold_6G00393550 Rroxscaffold_6G00395580 Rroxscaffold_6G00401250 Rroxscaffold_6G00402620 Rroxscaffold_6G00402630 Rroxscaffold_6G00405830 Rroxscaffold_6G00416450 Rroxscaffold_6G00416460 Rroxscaffold_6G00420480 Rroxscaffold_6G00420490 Rroxscaffold_6G00420500 Rroxscaffold_6G00424420 Rroxscaffold_6G00426830 Rroxscaffold_6G00426840 Rroxscaffold_6G00426850 Rroxscaffold_7G00156740 Rroxscaffold_7G00156750 Rroxscaffold_7G00156760 Rroxscaffold_7G00165580 Rroxscaffold_7G00168120 Rroxscaffold_7G00170070 Rroxscaffold_7G00170080 Rroxscaffold_7G00171380 Rroxscaffold_7G00171390 Rroxscaffold_7G00171400 Rroxscaffold_7G00174380 Rroxscaffold_7G00178710 Rroxscaffold_7G00178920 Rroxscaffold_7G00178930 Rroxscaffold_7G00189780 Rroxscaffold_7G00190190 Rroxscaffold_7G00191660 Rroxscaffold_7G00193640 Rroxscaffold_7G00193650 Rroxscaffold_7G00193660 Rroxscaffold_7G00194630 Rroxscaffold_7G00196810 Rroxscaffold_7G00203030 Rroxscaffold_7G00203040 Rroxscaffold_7G00203050 Rroxscaffold_7G00203060 Rroxscaffold_7G00203560 Rroxscaffold_7G00203830 Rroxscaffold_7G00204280 Rroxscaffold_7G00205470 Rroxscaffold_7G00205480 Rroxscaffold_7G00205620 Rroxscaffold_7G00207450 Rroxscaffold_7G00207460 Rroxscaffold_7G00209320 Rroxscaffold_7G00213000 Rroxscaffold_7G00213010 Rroxscaffold_7G00213020 Rroxscaffold_7G00213030 Rroxscaffold_7G00213040
rosa_samantha Rh1AG067100 Rh1CG067000 Rh5DG203700 Rh6CG190100
rosa_wichuraiana Rw0G006970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 162
AgsI TTSAA 4 cut(s) 55, 119, 337, 355
AluBI AGCT 3 cut(s) 11, 340, 361
AluI AGCT 3 cut(s) 11, 340, 361
Alw21I GWGCWC 1 cut(s) 28
AoxI GGCC 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 100
AspS9I GGNCC 2 cut(s) 74, 91
AvaII GGWCC 1 cut(s) 91
Bbv12I GWGCWC 1 cut(s) 28
BbvCI CCTCAGC 1 cut(s) 7
BbvI GCAGC 1 cut(s) 87
BccI CCATC 1 cut(s) 163
BciVI GTATCC 1 cut(s) 297
BfaI CTAG 2 cut(s) 164, 254
BfmI CTRYAG 2 cut(s) 58, 101
BfuI GTATCC 1 cut(s) 297
BisI GCNGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 102
BmcAI AGTACT 1 cut(s) 162
Bme18I GGWCC 1 cut(s) 91
BmgT120I GGNCC 2 cut(s) 74, 91
BmsI GCATC 5 cut(s) 136, 232, 247, 261, 354
Bpu10I CCTNAGC 1 cut(s) 7
BsaJI CCNNGG 1 cut(s) 237
Bse3DI GCAATG 1 cut(s) 368
BseDI CCNNGG 1 cut(s) 237
BseGI GGATG 4 cut(s) 46, 127, 174, 247
BseMI GCAATG 1 cut(s) 368
BseMII CTCAG 1 cut(s) 21
BseXI GCAGC 1 cut(s) 87
BshFI GGCC 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 28
BsiSI CCGG 1 cut(s) 180
BslFI GGGAC 1 cut(s) 25
BsmFI GGGAC 1 cut(s) 25
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 1 cut(s) 76
Bsp1286I GDGCHC 1 cut(s) 28
BspANI GGCC 1 cut(s) 76
BspCNI CTCAG 1 cut(s) 20
BspMAI CTGCAG 1 cut(s) 105
BsrDI GCAATG 1 cut(s) 368
BssECI CCNNGG 1 cut(s) 237
BssT1I CCWWGG 1 cut(s) 237
Bst4CI ACNGT 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 262
BstDEI CTNAG 1 cut(s) 7
BstF5I GGATG 4 cut(s) 46, 127, 174, 247
BstSFI CTRYAG 2 cut(s) 58, 101
BstV1I GCAGC 1 cut(s) 87
BsuI GTATCC 1 cut(s) 297
BsuRI GGCC 1 cut(s) 76
BtsCI GGATG 4 cut(s) 46, 127, 174, 247
Cac8I GCNNGC 1 cut(s) 262
Cfr13I GGNCC 2 cut(s) 74, 91
Csp6I GTAC 1 cut(s) 161
CviJI RGCY 6 cut(s) 11, 76, 100, 191, 340, 361
CviKI_1 RGCY 6 cut(s) 11, 76, 100, 191, 340, 361
CviQI GTAC 1 cut(s) 161
DdeI CTNAG 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 91
EcoT14I CCWWGG 1 cut(s) 237
EcoT22I ATGCAT 1 cut(s) 347
ErhI CCWWGG 1 cut(s) 237
FaiI YATR 9 cut(s) 14, 19, 33, 60, 68, 232, 251, 314, 343
FaqI GGGAC 1 cut(s) 25
Fnu4HI GCNGC 1 cut(s) 101
FokI GGATG 4 cut(s) 33, 114, 181, 254
Fsp4HI GCNGC 1 cut(s) 101
FspBI CTAG 2 cut(s) 164, 254
GluI GCNGC 1 cut(s) 101
HaeIII GGCC 1 cut(s) 76
HapII CCGG 1 cut(s) 180
HinfI GANTC 1 cut(s) 183
HpaII CCGG 1 cut(s) 180
Hpy188I TCNGA 1 cut(s) 214
Hpy188III TCNNGA 3 cut(s) 149, 203, 290
HpyAV CCTTC 1 cut(s) 53
HpyCH4III ACNGT 1 cut(s) 23
HpyCH4V TGCA 2 cut(s) 103, 345
HpyF3I CTNAG 1 cut(s) 7
LpnPI CCDG 8 cut(s) 50, 57, 109, 162, 193, 274, 281, 303
Lsp1109I GCAGC 1 cut(s) 87
LweI GCATC 5 cut(s) 136, 232, 247, 261, 354
MaeI CTAG 2 cut(s) 164, 254
MaeIII GTNAC 1 cut(s) 136
MhlI GDGCHC 1 cut(s) 28
MluCI AATT 1 cut(s) 119
MlyI GAGTC 1 cut(s) 192
MmeI TCCRAC 1 cut(s) 247
MnlI CCTC 2 cut(s) 16, 210
Mph1103I ATGCAT 1 cut(s) 347
MspI CCGG 1 cut(s) 180
Mva1269I GAATGC 1 cut(s) 173
NmuCI GTSAC 1 cut(s) 136
NsiI ATGCAT 1 cut(s) 347
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 1 cut(s) 173
PkrI GCNGC 1 cut(s) 102
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PspPI GGNCC 2 cut(s) 74, 91
PstI CTGCAG 1 cut(s) 105
RsaI GTAC 1 cut(s) 162
RsaNI GTAC 1 cut(s) 161
SatI GCNGC 1 cut(s) 101
Sau96I GGNCC 2 cut(s) 74, 91
ScaI AGTACT 1 cut(s) 162
SchI GAGTC 1 cut(s) 192
SduI GDGCHC 1 cut(s) 28
SetI ASST 8 cut(s) 8, 13, 39, 96, 239, 270, 342, 363
SfaNI GCATC 5 cut(s) 136, 232, 247, 261, 354
SfcI CTRYAG 2 cut(s) 58, 101
SinI GGWCC 1 cut(s) 91
Sse9I AATT 1 cut(s) 119
SspMI CTAG 2 cut(s) 164, 254
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 23
TaqI TCGA 1 cut(s) 204
TasI AATT 1 cut(s) 119
TatI WGTACW 1 cut(s) 160
TseFI GTSAC 1 cut(s) 136
TseI GCWGC 1 cut(s) 100
Tsp45I GTSAC 1 cut(s) 136
TspDTI ATGAA 1 cut(s) 35
VpaK11BI GGWCC 1 cut(s) 91
XspI CTAG 2 cut(s) 164, 254
ZrmI AGTACT 1 cut(s) 162
Zsp2I ATGCAT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.