Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 463 |
| AccBSI | CCGCTC | 1 cut(s) | 171 |
| AccII | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| AciI | CCGC | 7 cut(s) | 171, 174, 437, 481, 590, 655, 742 |
| AclWI | GGATC | 3 cut(s) | 389, 391, 404 |
| AcoI | YGGCCR | 2 cut(s) | 277, 450 |
| AcsI | RAATTY | 1 cut(s) | 206 |
| AfaI | GTAC | 3 cut(s) | 220, 325, 494 |
| AfeI | AGCGCT | 1 cut(s) | 112 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 38, 463 |
| AgsI | TTSAA | 2 cut(s) | 596, 646 |
| AhlI | ACTAGT | 1 cut(s) | 239 |
| AjnI | CCWGG | 2 cut(s) | 537, 610 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 393, 425 |
| AluBI | AGCT | 1 cut(s) | 709 |
| AluI | AGCT | 1 cut(s) | 709 |
| Alw21I | GWGCWC | 1 cut(s) | 162 |
| Alw26I | GTCTC | 1 cut(s) | 350 |
| AlwI | GGATC | 3 cut(s) | 389, 391, 404 |
| Ama87I | CYCGRG | 1 cut(s) | 293 |
| Aor51HI | AGCGCT | 1 cut(s) | 112 |
| AoxI | GGCC | 6 cut(s) | 25, 93, 277, 336, 370, 450 |
| ApeKI | GCWGC | 3 cut(s) | 108, 439, 686 |
| ApoI | RAATTY | 1 cut(s) | 206 |
| AsiSI | GCGATCGC | 1 cut(s) | 634 |
| AspLEI | GCGC | 6 cut(s) | 113, 617, 638, 640, 642, 659 |
| AspS9I | GGNCC | 2 cut(s) | 94, 371 |
| AsuHPI | GGTGA | 2 cut(s) | 67, 73 |
| AvaI | CYCGRG | 1 cut(s) | 293 |
| BamHI | GGATCC | 1 cut(s) | 396 |
| BanII | GRGCYC | 2 cut(s) | 294, 316 |
| Bbv12I | GWGCWC | 1 cut(s) | 162 |
| BbvI | GCAGC | 3 cut(s) | 120, 426, 698 |
| BccI | CCATC | 5 cut(s) | 26, 32, 41, 129, 429 |
| BceAI | ACGGC | 2 cut(s) | 292, 643 |
| BciT130I | CCWGG | 2 cut(s) | 539, 612 |
| BcoDI | GTCTC | 1 cut(s) | 350 |
| BcuI | ACTAGT | 1 cut(s) | 239 |
| BfaI | CTAG | 3 cut(s) | 240, 308, 360 |
| BfoI | RGCGCY | 2 cut(s) | 114, 618 |
| BisI | GCNGC | 6 cut(s) | 109, 172, 440, 481, 655, 687 |
| BlsI | GCNGC | 6 cut(s) | 110, 173, 441, 482, 656, 688 |
| Bme1390I | CCNGG | 2 cut(s) | 539, 612 |
| BmeT110I | CYCGRG | 1 cut(s) | 293 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 371 |
| BmiI | GGNNCC | 4 cut(s) | 124, 313, 373, 398 |
| BmrFI | CCNGG | 2 cut(s) | 539, 612 |
| BmsI | GCATC | 2 cut(s) | 355, 537 |
| Bsa29I | ATCGAT | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 90, 690 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 107, 137 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 38, 463 |
| Bse118I | RCCGGY | 1 cut(s) | 448 |
| Bse1I | ACTGG | 4 cut(s) | 28, 306, 736, 759 |
| BseBI | CCWGG | 2 cut(s) | 539, 612 |
| BseCI | ATCGAT | 1 cut(s) | 36 |
| BseDI | CCNNGG | 2 cut(s) | 90, 690 |
| BseGI | GGATG | 3 cut(s) | 346, 547, 586 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 38, 463 |
| BseMII | CTCAG | 1 cut(s) | 684 |
| BseNI | ACTGG | 4 cut(s) | 28, 306, 736, 759 |
| BsePI | GCGCGC | 2 cut(s) | 636, 638 |
| BseRI | GAGGAG | 1 cut(s) | 492 |
| BseX3I | CGGCCG | 1 cut(s) | 450 |
| BseXI | GCAGC | 3 cut(s) | 120, 426, 698 |
| Bsh1236I | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| Bsh1285I | CGRYCG | 2 cut(s) | 453, 634 |
| BshFI | GGCC | 6 cut(s) | 27, 95, 279, 338, 372, 452 |
| BshVI | ATCGAT | 1 cut(s) | 36 |
| BsiEI | CGRYCG | 2 cut(s) | 453, 634 |
| BsiHKAI | GWGCWC | 1 cut(s) | 162 |
| BsiHKCI | CYCGRG | 1 cut(s) | 293 |
| BsiSI | CCGG | 1 cut(s) | 449 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 38, 463 |
| BsmAI | GTCTC | 1 cut(s) | 350 |
| BsmI | GAATGC | 1 cut(s) | 521 |
| BsnI | GGCC | 6 cut(s) | 27, 95, 279, 338, 372, 452 |
| BsoBI | CYCGRG | 1 cut(s) | 293 |
| Bsp1286I | GDGCHC | 3 cut(s) | 162, 294, 316 |
| Bsp143I | GATC | 4 cut(s) | 381, 396, 631, 660 |
| Bsp19I | CCATGG | 1 cut(s) | 90 |
| Bsp68I | TCGCGA | 1 cut(s) | 426 |
| BspACI | CCGC | 7 cut(s) | 171, 174, 437, 481, 590, 655, 742 |
| BspANI | GGCC | 6 cut(s) | 27, 95, 279, 338, 372, 452 |
| BspCNI | CTCAG | 1 cut(s) | 683 |
| BspDI | ATCGAT | 1 cut(s) | 36 |
| BspFNI | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| BspLI | GGNNCC | 4 cut(s) | 124, 313, 373, 398 |
| BspPI | GGATC | 3 cut(s) | 389, 391, 404 |
| BsrBI | CCGCTC | 1 cut(s) | 171 |
| BsrFI | RCCGGY | 1 cut(s) | 448 |
| BsrI | ACTGG | 4 cut(s) | 28, 306, 736, 759 |
| BssAI | RCCGGY | 1 cut(s) | 448 |
| BssECI | CCNNGG | 2 cut(s) | 90, 690 |
| BssHII | GCGCGC | 2 cut(s) | 636, 638 |
| BssMI | GATC | 4 cut(s) | 381, 396, 631, 660 |
| BssT1I | CCWWGG | 2 cut(s) | 90, 690 |
| Bst2UI | CCWGG | 2 cut(s) | 539, 612 |
| Bst4CI | ACNGT | 2 cut(s) | 59, 119 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 304 |
| BstC8I | GCNNGC | 4 cut(s) | 44, 169, 638, 640 |
| BstDEI | CTNAG | 3 cut(s) | 187, 670, 698 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstF5I | GGATG | 3 cut(s) | 346, 547, 586 |
| BstFNI | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| BstH2I | RGCGCY | 2 cut(s) | 114, 618 |
| BstHHI | GCGC | 6 cut(s) | 113, 617, 638, 640, 642, 659 |
| BstKTI | GATC | 4 cut(s) | 384, 399, 634, 663 |
| BstMAI | GTCTC | 1 cut(s) | 350 |
| BstMBI | GATC | 4 cut(s) | 381, 396, 631, 660 |
| BstMCI | CGRYCG | 2 cut(s) | 453, 634 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 304, 369, 621, 741 |
| BstNI | CCWGG | 2 cut(s) | 539, 612 |
| BstSCI | CCNGG | 2 cut(s) | 537, 610 |
| BstUI | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| BstV1I | GCAGC | 3 cut(s) | 120, 426, 698 |
| BstX2I | RGATCY | 2 cut(s) | 381, 396 |
| BstYI | RGATCY | 2 cut(s) | 381, 396 |
| BstZI | CGGCCG | 1 cut(s) | 450 |
| Bsu15I | ATCGAT | 1 cut(s) | 36 |
| BsuRI | GGCC | 6 cut(s) | 27, 95, 279, 338, 372, 452 |
| BsuTUI | ATCGAT | 1 cut(s) | 36 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtgZI | GCGATG | 2 cut(s) | 407, 441 |
| BtsCI | GGATG | 3 cut(s) | 346, 547, 586 |
| BtsIMutI | CAGTG | 2 cut(s) | 21, 124 |
| BtuMI | TCGCGA | 1 cut(s) | 426 |
| Cac8I | GCNNGC | 4 cut(s) | 44, 169, 638, 640 |
| CfoI | GCGC | 6 cut(s) | 113, 617, 638, 640, 642, 659 |
| Cfr10I | RCCGGY | 1 cut(s) | 448 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 371 |
| ClaI | ATCGAT | 1 cut(s) | 36 |
| Csp6I | GTAC | 3 cut(s) | 219, 324, 493 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 120, 155 |
| CviAII | CATG | 2 cut(s) | 91, 101 |
| CviQI | GTAC | 3 cut(s) | 219, 324, 493 |
| DdeI | CTNAG | 3 cut(s) | 187, 670, 698 |
| DpnI | GATC | 4 cut(s) | 383, 398, 633, 662 |
| DpnII | GATC | 4 cut(s) | 381, 396, 631, 660 |
| EaeI | YGGCCR | 2 cut(s) | 277, 450 |
| EagI | CGGCCG | 1 cut(s) | 450 |
| EciI | GGCGGA | 2 cut(s) | 189, 731 |
| EclXI | CGGCCG | 1 cut(s) | 450 |
| Eco130I | CCWWGG | 2 cut(s) | 90, 690 |
| Eco24I | GRGCYC | 2 cut(s) | 294, 316 |
| Eco32I | GATATC | 1 cut(s) | 676 |
| Eco47III | AGCGCT | 1 cut(s) | 112 |
| Eco52I | CGGCCG | 1 cut(s) | 450 |
| Eco88I | CYCGRG | 1 cut(s) | 293 |
| EcoRII | CCWGG | 2 cut(s) | 537, 610 |
| EcoRV | GATATC | 1 cut(s) | 676 |
| EcoT14I | CCWWGG | 2 cut(s) | 90, 690 |
| EcoT22I | ATGCAT | 1 cut(s) | 348 |
| EcoT38I | GRGCYC | 2 cut(s) | 294, 316 |
| ErhI | CCWWGG | 2 cut(s) | 90, 690 |
| FaeI | CATG | 2 cut(s) | 94, 104 |
| FatI | CATG | 2 cut(s) | 90, 100 |
| Fnu4HI | GCNGC | 6 cut(s) | 109, 172, 440, 481, 655, 687 |
| FokI | GGATG | 3 cut(s) | 333, 554, 573 |
| FriOI | GRGCYC | 2 cut(s) | 294, 316 |
| Fsp4HI | GCNGC | 6 cut(s) | 109, 172, 440, 481, 655, 687 |
| FspBI | CTAG | 3 cut(s) | 240, 308, 360 |
| GlaI | GCGC | 6 cut(s) | 112, 616, 637, 639, 641, 658 |
| GluI | GCNGC | 6 cut(s) | 109, 172, 440, 481, 655, 687 |
| HaeII | RGCGCY | 2 cut(s) | 114, 618 |
| HaeIII | GGCC | 6 cut(s) | 27, 95, 279, 338, 372, 452 |
| HapII | CCGG | 1 cut(s) | 449 |
| HhaI | GCGC | 6 cut(s) | 113, 617, 638, 640, 642, 659 |
| Hin1II | CATG | 2 cut(s) | 94, 104 |
| Hin6I | GCGC | 6 cut(s) | 111, 615, 636, 638, 640, 657 |
| HinP1I | GCGC | 6 cut(s) | 111, 615, 636, 638, 640, 657 |
| HinfI | GANTC | 5 cut(s) | 68, 177, 579, 603, 681 |
| HpaII | CCGG | 1 cut(s) | 449 |
| HphI | GGTGA | 2 cut(s) | 67, 73 |
| Hpy166II | GTNNAC | 1 cut(s) | 233 |
| Hpy188I | TCNGA | 3 cut(s) | 514, 673, 680 |
| Hpy188III | TCNNGA | 3 cut(s) | 155, 394, 425 |
| Hpy8I | GTNNAC | 1 cut(s) | 233 |
| HpyAV | CCTTC | 2 cut(s) | 88, 617 |
| HpyCH4III | ACNGT | 2 cut(s) | 59, 119 |
| HpyCH4V | TGCA | 1 cut(s) | 346 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 304, 369, 621, 741 |
| HpyF3I | CTNAG | 3 cut(s) | 187, 670, 698 |
| Hsp92II | CATG | 2 cut(s) | 94, 104 |
| HspAI | GCGC | 6 cut(s) | 111, 615, 636, 638, 640, 657 |
| Kzo9I | GATC | 4 cut(s) | 381, 396, 631, 660 |
| LmnI | GCTCC | 4 cut(s) | 128, 157, 311, 767 |
| Lsp1109I | GCAGC | 3 cut(s) | 120, 426, 698 |
| LweI | GCATC | 2 cut(s) | 355, 537 |
| MaeI | CTAG | 3 cut(s) | 240, 308, 360 |
| MaeIII | GTNAC | 2 cut(s) | 73, 701 |
| MalI | GATC | 4 cut(s) | 383, 398, 633, 662 |
| MauBI | CGCGCGCG | 1 cut(s) | 636 |
| MbiI | CCGCTC | 1 cut(s) | 171 |
| MboI | GATC | 4 cut(s) | 381, 396, 631, 660 |
| MboII | GAAGA | 3 cut(s) | 205, 409, 588 |
| MflI | RGATCY | 2 cut(s) | 381, 396 |
| MhlI | GDGCHC | 3 cut(s) | 162, 294, 316 |
| MluCI | AATT | 2 cut(s) | 62, 206 |
| MlyI | GAGTC | 1 cut(s) | 62 |
| MnlI | CCTC | 5 cut(s) | 94, 235, 478, 513, 755 |
| Mph1103I | ATGCAT | 1 cut(s) | 348 |
| MslI | CAYNNNNRTG | 1 cut(s) | 426 |
| MspA1I | CMGCKG | 1 cut(s) | 439 |
| MspI | CCGG | 1 cut(s) | 449 |
| MspR9I | CCNGG | 2 cut(s) | 539, 612 |
| Mva1269I | GAATGC | 1 cut(s) | 521 |
| MvaI | CCWGG | 2 cut(s) | 539, 612 |
| MvnI | CGCG | 7 cut(s) | 426, 483, 636, 638, 640, 657, 659 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 304, 369, 621, 741 |
| NcoI | CCATGG | 1 cut(s) | 90 |
| NdeII | GATC | 4 cut(s) | 381, 396, 631, 660 |
| NlaIII | CATG | 2 cut(s) | 94, 104 |
| NlaIV | GGNNCC | 4 cut(s) | 124, 313, 373, 398 |
| NmuCI | GTSAC | 1 cut(s) | 73 |
| NruI | TCGCGA | 1 cut(s) | 426 |
| NsiI | ATGCAT | 1 cut(s) | 348 |
| PauI | GCGCGC | 2 cut(s) | 636, 638 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 282 |
| PctI | GAATGC | 1 cut(s) | 521 |
| PfeI | GAWTC | 4 cut(s) | 177, 579, 603, 681 |
| PflFI | GACNNNGTC | 1 cut(s) | 71 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 463 |
| PfoI | TCCNGGA | 1 cut(s) | 537 |
| PkrI | GCNGC | 6 cut(s) | 110, 173, 441, 482, 656, 688 |
| Ple19I | CGATCG | 1 cut(s) | 634 |
| PleI | GAGTC | 1 cut(s) | 62 |
| PpsI | GAGTC | 1 cut(s) | 62 |
| Psp6I | CCWGG | 2 cut(s) | 537, 610 |
| PspGI | CCWGG | 2 cut(s) | 537, 610 |
| PspN4I | GGNNCC | 4 cut(s) | 124, 313, 373, 398 |
| PspPI | GGNCC | 2 cut(s) | 94, 371 |
| PsuI | RGATCY | 2 cut(s) | 381, 396 |
| PsyI | GACNNNGTC | 1 cut(s) | 71 |
| PteI | GCGCGC | 2 cut(s) | 636, 638 |
| PvuI | CGATCG | 1 cut(s) | 634 |
| RgaI | GCGATCGC | 1 cut(s) | 634 |
| RruI | TCGCGA | 1 cut(s) | 426 |
| RsaI | GTAC | 3 cut(s) | 220, 325, 494 |
| RsaNI | GTAC | 3 cut(s) | 219, 324, 493 |
| RseI | CAYNNNNRTG | 1 cut(s) | 426 |
| SatI | GCNGC | 6 cut(s) | 109, 172, 440, 481, 655, 687 |
| Sau3AI | GATC | 4 cut(s) | 381, 396, 631, 660 |
| Sau96I | GGNCC | 2 cut(s) | 94, 371 |
| SchI | GAGTC | 1 cut(s) | 62 |
| ScrFI | CCNGG | 2 cut(s) | 539, 612 |
| SduI | GDGCHC | 3 cut(s) | 162, 294, 316 |
| SetI | ASST | 7 cut(s) | 80, 86, 407, 494, 527, 574, 711 |
| SfaAI | GCGATCGC | 1 cut(s) | 634 |
| SfaNI | GCATC | 2 cut(s) | 355, 537 |
| SgfI | GCGATCGC | 1 cut(s) | 634 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 426 |
| SpeI | ACTAGT | 1 cut(s) | 239 |
| Sse9I | AATT | 2 cut(s) | 62, 206 |
| SsiI | CCGC | 7 cut(s) | 171, 174, 437, 481, 590, 655, 742 |
| SspI | AATATT | 2 cut(s) | 194, 567 |
| SspMI | CTAG | 3 cut(s) | 240, 308, 360 |
| StyD4I | CCNGG | 2 cut(s) | 537, 610 |
| StyI | CCWWGG | 2 cut(s) | 90, 690 |
| TaaI | ACNGT | 2 cut(s) | 59, 119 |
| TaqI | TCGA | 2 cut(s) | 36, 86 |
| TasI | AATT | 2 cut(s) | 62, 206 |
| TatI | WGTACW | 1 cut(s) | 218 |
| TauI | GCSGC | 3 cut(s) | 174, 483, 657 |
| TfiI | GAWTC | 4 cut(s) | 177, 579, 603, 681 |
| TscAI | CASTG | 2 cut(s) | 28, 124 |
| TseFI | GTSAC | 1 cut(s) | 73 |
| TseI | GCWGC | 3 cut(s) | 108, 439, 686 |
| Tsp45I | GTSAC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 1 cut(s) | 199 |
| TspRI | CASTG | 2 cut(s) | 28, 124 |
| Tth111I | GACNNNGTC | 1 cut(s) | 71 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 463 |
| XapI | RAATTY | 1 cut(s) | 206 |
| XspI | CTAG | 3 cut(s) | 240, 308, 360 |
| Zsp2I | ATGCAT | 1 cut(s) | 348 |