Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 194 |
| AccB1I | GGYRCC | 2 cut(s) | 71, 269 |
| AccBSI | CCGCTC | 1 cut(s) | 1107 |
| AccII | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| AccIII | TCCGGA | 1 cut(s) | 1149 |
| AciI | CCGC | 8 cut(s) | 167, 349, 471, 895, 908, 952, 1105, 1204 |
| AclWI | GGATC | 3 cut(s) | 862, 875, 1082 |
| AcoI | YGGCCR | 2 cut(s) | 302, 921 |
| AcyI | GRCGYC | 1 cut(s) | 189 |
| AfaI | GTAC | 5 cut(s) | 570, 803, 965, 1004, 1025 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 240, 294, 425, 554, 733 |
| AjnI | CCWGG | 3 cut(s) | 247, 1081, 1113 |
| AluBI | AGCT | 2 cut(s) | 1173, 1180 |
| AluI | AGCT | 2 cut(s) | 1173, 1180 |
| Alw21I | GWGCWC | 4 cut(s) | 88, 322, 1065, 1182 |
| Alw26I | GTCTC | 4 cut(s) | 246, 338, 821, 1138 |
| Alw44I | GTGCAC | 1 cut(s) | 318 |
| AlwI | GGATC | 3 cut(s) | 862, 875, 1082 |
| Ama87I | CYCGRG | 1 cut(s) | 601 |
| Aor13HI | TCCGGA | 1 cut(s) | 1149 |
| AoxI | GGCC | 9 cut(s) | 157, 221, 302, 541, 735, 748, 783, 841, 921 |
| ApaI | GGGCCC | 2 cut(s) | 161, 787 |
| ApaLI | GTGCAC | 1 cut(s) | 318 |
| ApeKI | GCWGC | 6 cut(s) | 56, 377, 446, 579, 1125, 1157 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 479, 511 |
| AspLEI | GCGC | 2 cut(s) | 584, 1130 |
| AspS9I | GGNCC | 8 cut(s) | 157, 158, 222, 720, 736, 783, 784, 842 |
| AsuC2I | CCSGG | 2 cut(s) | 151, 626 |
| AsuHPI | GGTGA | 2 cut(s) | 104, 379 |
| AvaI | CYCGRG | 1 cut(s) | 601 |
| AvaII | GGWCC | 1 cut(s) | 720 |
| BaeGI | GKGCMC | 5 cut(s) | 74, 161, 274, 322, 787 |
| BalI | TGGCCA | 1 cut(s) | 304 |
| BamHI | GGATCC | 1 cut(s) | 867 |
| BanI | GGYRCC | 2 cut(s) | 71, 269 |
| BanII | GRGCYC | 4 cut(s) | 161, 765, 787, 1182 |
| BauI | CACGAG | 1 cut(s) | 420 |
| BbsI | GAAGAC | 2 cut(s) | 200, 906 |
| Bbv12I | GWGCWC | 4 cut(s) | 88, 322, 1065, 1182 |
| BbvI | GCAGC | 6 cut(s) | 43, 389, 433, 591, 1137, 1144 |
| BccI | CCATC | 9 cut(s) | 150, 200, 313, 420, 542, 548, 557, 600, 936 |
| BceAI | ACGGC | 4 cut(s) | 69, 750, 763, 1006 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 61, 95, 930, 964 |
| BciT130I | CCWGG | 3 cut(s) | 249, 1083, 1115 |
| BcnI | CCSGG | 2 cut(s) | 151, 626 |
| BcoDI | GTCTC | 4 cut(s) | 246, 338, 821, 1138 |
| BfaI | CTAG | 2 cut(s) | 98, 728 |
| BfoI | RGCGCY | 1 cut(s) | 585 |
| BglII | AGATCT | 1 cut(s) | 358 |
| BisI | GCNGC | 8 cut(s) | 57, 378, 447, 580, 895, 952, 1126, 1158 |
| BlsI | GCNGC | 8 cut(s) | 58, 379, 448, 581, 896, 953, 1127, 1159 |
| BmcAI | AGTACT | 1 cut(s) | 965 |
| Bme1390I | CCNGG | 5 cut(s) | 151, 249, 626, 1083, 1115 |
| Bme18I | GGWCC | 1 cut(s) | 720 |
| BmeT110I | CYCGRG | 1 cut(s) | 601 |
| BmgT120I | GGNCC | 8 cut(s) | 157, 158, 222, 720, 736, 783, 784, 842 |
| BmiI | GGNNCC | 8 cut(s) | 6, 73, 159, 271, 784, 785, 844, 869 |
| BmrFI | CCNGG | 5 cut(s) | 151, 249, 626, 1083, 1115 |
| BmsI | GCATC | 5 cut(s) | 87, 393, 519, 804, 826 |
| BpiI | GAAGAC | 2 cut(s) | 200, 906 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 499, 531 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| BpuEI | CTTGAG | 1 cut(s) | 680 |
| BpuMI | CCSGG | 2 cut(s) | 151, 626 |
| Bsa29I | ATCGAT | 2 cut(s) | 27, 552 |
| BsaHI | GRCGYC | 1 cut(s) | 189 |
| BsaI | GGTCTC | 1 cut(s) | 821 |
| BsaWI | WCCGGW | 2 cut(s) | 641, 1149 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 108, 138, 636, 666 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 240, 294, 425, 554, 733 |
| Bse118I | RCCGGY | 2 cut(s) | 219, 919 |
| Bse1I | ACTGG | 2 cut(s) | 544, 715 |
| BseAI | TCCGGA | 1 cut(s) | 1149 |
| BseBI | CCWGG | 3 cut(s) | 249, 1083, 1115 |
| BseCI | ATCGAT | 2 cut(s) | 27, 552 |
| BseGI | GGATG | 5 cut(s) | 305, 525, 817, 903, 1146 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 240, 294, 425, 554, 733 |
| BseMII | CTCAG | 1 cut(s) | 1183 |
| BseNI | ACTGG | 2 cut(s) | 544, 715 |
| BseSI | GKGCMC | 5 cut(s) | 74, 161, 274, 322, 787 |
| BseXI | GCAGC | 6 cut(s) | 43, 389, 433, 591, 1137, 1144 |
| BseYI | CCCAGC | 1 cut(s) | 160 |
| BsgI | GTGCAG | 1 cut(s) | 673 |
| Bsh1236I | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| Bsh1285I | CGRYCG | 1 cut(s) | 642 |
| BshFI | GGCC | 9 cut(s) | 159, 223, 304, 543, 737, 750, 785, 843, 923 |
| BshNI | GGYRCC | 2 cut(s) | 71, 269 |
| BshVI | ATCGAT | 2 cut(s) | 27, 552 |
| BsiEI | CGRYCG | 1 cut(s) | 642 |
| BsiHKAI | GWGCWC | 4 cut(s) | 88, 322, 1065, 1182 |
| BsiHKCI | CYCGRG | 1 cut(s) | 601 |
| BsiSI | CCGG | 7 cut(s) | 150, 220, 625, 642, 840, 920, 1150 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 240, 294, 425, 554, 733 |
| BsmAI | GTCTC | 4 cut(s) | 246, 338, 821, 1138 |
| BsmBI | CGTCTC | 1 cut(s) | 338 |
| BsmI | GAATGC | 3 cut(s) | 90, 379, 992 |
| BsnI | GGCC | 9 cut(s) | 159, 223, 304, 543, 737, 750, 785, 843, 923 |
| Bso31I | GGTCTC | 1 cut(s) | 821 |
| BsoBI | CYCGRG | 1 cut(s) | 601 |
| Bsp120I | GGGCCC | 2 cut(s) | 157, 783 |
| Bsp1286I | GDGCHC | 9 cut(s) | 74, 88, 161, 274, 322, 765, 787, 1065, 1182 |
| Bsp13I | TCCGGA | 1 cut(s) | 1149 |
| Bsp1407I | TGTACA | 1 cut(s) | 568 |
| Bsp143I | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| Bsp68I | TCGCGA | 1 cut(s) | 342 |
| BspACI | CCGC | 8 cut(s) | 167, 349, 471, 895, 908, 952, 1105, 1204 |
| BspANI | GGCC | 9 cut(s) | 159, 223, 304, 543, 737, 750, 785, 843, 923 |
| BspCNI | CTCAG | 1 cut(s) | 1182 |
| BspDI | ATCGAT | 2 cut(s) | 27, 552 |
| BspEI | TCCGGA | 1 cut(s) | 1149 |
| BspFNI | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| BspLI | GGNNCC | 8 cut(s) | 6, 73, 159, 271, 784, 785, 844, 869 |
| BspPI | GGATC | 3 cut(s) | 862, 875, 1082 |
| BspT107I | GGYRCC | 2 cut(s) | 71, 269 |
| BspTNI | GGTCTC | 1 cut(s) | 821 |
| BsrBI | CCGCTC | 1 cut(s) | 1107 |
| BsrFI | RCCGGY | 2 cut(s) | 219, 919 |
| BsrGI | TGTACA | 1 cut(s) | 568 |
| BsrI | ACTGG | 2 cut(s) | 544, 715 |
| BssAI | RCCGGY | 2 cut(s) | 219, 919 |
| BssMI | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| BssNI | GRCGYC | 1 cut(s) | 189 |
| BssSI | CACGAG | 1 cut(s) | 420 |
| Bst2BI | CACGAG | 1 cut(s) | 420 |
| Bst2UI | CCWGG | 3 cut(s) | 249, 1083, 1115 |
| Bst4CI | ACNGT | 2 cut(s) | 206, 1028 |
| Bst6I | CTCTTC | 1 cut(s) | 893 |
| BstACI | GRCGYC | 1 cut(s) | 189 |
| BstAUI | TGTACA | 1 cut(s) | 568 |
| BstC8I | GCNNGC | 6 cut(s) | 88, 221, 382, 437, 545, 1204 |
| BstDEI | CTNAG | 3 cut(s) | 12, 934, 1169 |
| BstF5I | GGATG | 5 cut(s) | 305, 525, 817, 903, 1146 |
| BstFNI | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| BstH2I | RGCGCY | 1 cut(s) | 585 |
| BstHHI | GCGC | 2 cut(s) | 584, 1130 |
| BstKTI | GATC | 4 cut(s) | 31, 361, 870, 1090 |
| BstMAI | GTCTC | 4 cut(s) | 246, 338, 821, 1138 |
| BstMBI | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| BstMCI | CGRYCG | 1 cut(s) | 642 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1092 |
| BstNI | CCWGG | 3 cut(s) | 249, 1083, 1115 |
| BstNSI | RCATGY | 1 cut(s) | 799 |
| BstSCI | CCNGG | 5 cut(s) | 149, 247, 624, 1081, 1113 |
| BstSLI | GKGCMC | 5 cut(s) | 74, 161, 274, 322, 787 |
| BstUI | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| BstV1I | GCAGC | 6 cut(s) | 43, 389, 433, 591, 1137, 1144 |
| BstV2I | GAAGAC | 2 cut(s) | 200, 906 |
| BstX2I | RGATCY | 2 cut(s) | 358, 867 |
| BstYI | RGATCY | 2 cut(s) | 358, 867 |
| Bsu15I | ATCGAT | 2 cut(s) | 27, 552 |
| BsuRI | GGCC | 9 cut(s) | 159, 223, 304, 543, 737, 750, 785, 843, 923 |
| BsuTUI | ATCGAT | 2 cut(s) | 27, 552 |
| BtsCI | GGATG | 5 cut(s) | 305, 525, 817, 903, 1146 |
| BtsIMutI | CAGTG | 2 cut(s) | 537, 708 |
| BtuMI | TCGCGA | 1 cut(s) | 342 |
| Cac8I | GCNNGC | 6 cut(s) | 88, 221, 382, 437, 545, 1204 |
| CfoI | GCGC | 2 cut(s) | 584, 1130 |
| Cfr10I | RCCGGY | 2 cut(s) | 219, 919 |
| Cfr13I | GGNCC | 8 cut(s) | 157, 158, 222, 720, 736, 783, 784, 842 |
| ClaI | ATCGAT | 2 cut(s) | 27, 552 |
| CseI | GACGC | 3 cut(s) | 197, 355, 361 |
| Csp6I | GTAC | 5 cut(s) | 569, 802, 964, 1003, 1024 |
| CviAII | CATG | 2 cut(s) | 572, 796 |
| CviQI | GTAC | 5 cut(s) | 569, 802, 964, 1003, 1024 |
| DdeI | CTNAG | 3 cut(s) | 12, 934, 1169 |
| DpnI | GATC | 4 cut(s) | 30, 360, 869, 1089 |
| DpnII | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 194 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 194 |
| EaeI | YGGCCR | 2 cut(s) | 302, 921 |
| Eam1104I | CTCTTC | 1 cut(s) | 893 |
| EarI | CTCTTC | 1 cut(s) | 893 |
| Ecl136II | GAGCTC | 1 cut(s) | 1180 |
| Eco24I | GRGCYC | 4 cut(s) | 161, 765, 787, 1182 |
| Eco31I | GGTCTC | 1 cut(s) | 821 |
| Eco47I | GGWCC | 1 cut(s) | 720 |
| Eco53kI | GAGCTC | 1 cut(s) | 1180 |
| Eco88I | CYCGRG | 1 cut(s) | 601 |
| EcoICRI | GAGCTC | 1 cut(s) | 1180 |
| EcoO109I | RGGNCCY | 2 cut(s) | 783, 784 |
| EcoRII | CCWGG | 3 cut(s) | 247, 1081, 1113 |
| EcoT22I | ATGCAT | 1 cut(s) | 819 |
| EcoT38I | GRGCYC | 4 cut(s) | 161, 765, 787, 1182 |
| Esp3I | CGTCTC | 1 cut(s) | 338 |
| FaeI | CATG | 2 cut(s) | 575, 799 |
| FatI | CATG | 2 cut(s) | 571, 795 |
| FauI | CCCGC | 1 cut(s) | 915 |
| Fnu4HI | GCNGC | 8 cut(s) | 57, 378, 447, 580, 895, 952, 1126, 1158 |
| FokI | GGATG | 5 cut(s) | 292, 512, 804, 890, 1133 |
| FriOI | GRGCYC | 4 cut(s) | 161, 765, 787, 1182 |
| Fsp4HI | GCNGC | 8 cut(s) | 57, 378, 447, 580, 895, 952, 1126, 1158 |
| FspBI | CTAG | 2 cut(s) | 98, 728 |
| GlaI | GCGC | 2 cut(s) | 583, 1129 |
| GluI | GCNGC | 8 cut(s) | 57, 378, 447, 580, 895, 952, 1126, 1158 |
| GsaI | CCCAGC | 1 cut(s) | 164 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HaeII | RGCGCY | 1 cut(s) | 585 |
| HaeIII | GGCC | 9 cut(s) | 159, 223, 304, 543, 737, 750, 785, 843, 923 |
| HapII | CCGG | 7 cut(s) | 150, 220, 625, 642, 840, 920, 1150 |
| HgaI | GACGC | 3 cut(s) | 197, 355, 361 |
| HhaI | GCGC | 2 cut(s) | 584, 1130 |
| Hin1I | GRCGYC | 1 cut(s) | 189 |
| Hin1II | CATG | 2 cut(s) | 575, 799 |
| Hin6I | GCGC | 2 cut(s) | 582, 1128 |
| HinP1I | GCGC | 2 cut(s) | 582, 1128 |
| HinfI | GANTC | 3 cut(s) | 244, 648, 1050 |
| HpaII | CCGG | 7 cut(s) | 150, 220, 625, 642, 840, 920, 1150 |
| HphI | GGTGA | 2 cut(s) | 104, 379 |
| Hpy166II | GTNNAC | 2 cut(s) | 320, 704 |
| Hpy188I | TCNGA | 6 cut(s) | 63, 139, 239, 767, 985, 1144 |
| Hpy188III | TCNNGA | 8 cut(s) | 32, 98, 341, 463, 850, 865, 871, 1150 |
| Hpy8I | GTNNAC | 2 cut(s) | 320, 704 |
| Hpy99I | CGWCG | 2 cut(s) | 191, 814 |
| HpyAV | CCTTC | 4 cut(s) | 137, 234, 703, 856 |
| HpyCH4III | ACNGT | 2 cut(s) | 206, 1028 |
| HpyCH4V | TGCA | 5 cut(s) | 320, 377, 675, 690, 817 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1092 |
| HpyF3I | CTNAG | 3 cut(s) | 12, 934, 1169 |
| Hsp92I | GRCGYC | 1 cut(s) | 189 |
| Hsp92II | CATG | 2 cut(s) | 575, 799 |
| HspAI | GCGC | 2 cut(s) | 582, 1128 |
| Kpn2I | TCCGGA | 1 cut(s) | 1149 |
| KroI | GCCGGC | 1 cut(s) | 219 |
| KroNI | GCCGGC | 1 cut(s) | 221 |
| Kzo9I | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| LmnI | GCTCC | 2 cut(s) | 10, 1192 |
| Lsp1109I | GCAGC | 6 cut(s) | 43, 389, 433, 591, 1137, 1144 |
| LweI | GCATC | 5 cut(s) | 87, 393, 519, 804, 826 |
| MaeI | CTAG | 2 cut(s) | 98, 728 |
| MalI | GATC | 4 cut(s) | 30, 360, 869, 1089 |
| MbiI | CCGCTC | 1 cut(s) | 1107 |
| MboI | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| MboII | GAAGA | 9 cut(s) | 47, 50, 200, 407, 880, 911, 1059, 1070, 1175 |
| MflI | RGATCY | 2 cut(s) | 358, 867 |
| MhlI | GDGCHC | 9 cut(s) | 74, 88, 161, 274, 322, 765, 787, 1065, 1182 |
| MlsI | TGGCCA | 1 cut(s) | 304 |
| MluCI | AATT | 3 cut(s) | 41, 298, 1035 |
| MluNI | TGGCCA | 1 cut(s) | 304 |
| MlyI | GAGTC | 1 cut(s) | 238 |
| MmeI | TCCRAC | 4 cut(s) | 162, 501, 907, 990 |
| Mox20I | TGGCCA | 1 cut(s) | 304 |
| Mph1103I | ATGCAT | 1 cut(s) | 819 |
| MroI | TCCGGA | 1 cut(s) | 1149 |
| MroNI | GCCGGC | 1 cut(s) | 219 |
| MscI | TGGCCA | 1 cut(s) | 304 |
| MseI | TTAA | 2 cut(s) | 44, 1034 |
| Msp20I | TGGCCA | 1 cut(s) | 304 |
| MspI | CCGG | 7 cut(s) | 150, 220, 625, 642, 840, 920, 1150 |
| MspR9I | CCNGG | 5 cut(s) | 151, 249, 626, 1083, 1115 |
| Mva1269I | GAATGC | 3 cut(s) | 90, 379, 992 |
| MvaI | CCWGG | 3 cut(s) | 249, 1083, 1115 |
| MvnI | CGCG | 5 cut(s) | 342, 349, 355, 897, 954 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1092 |
| NaeI | GCCGGC | 1 cut(s) | 221 |
| NciI | CCSGG | 2 cut(s) | 151, 626 |
| NdeII | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| NgoMIV | GCCGGC | 1 cut(s) | 219 |
| NlaIII | CATG | 2 cut(s) | 575, 799 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 73, 159, 271, 784, 785, 844, 869 |
| NruI | TCGCGA | 1 cut(s) | 342 |
| NsiI | ATGCAT | 1 cut(s) | 819 |
| NspI | RCATGY | 1 cut(s) | 799 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 192 |
| PctI | GAATGC | 3 cut(s) | 90, 379, 992 |
| PdiI | GCCGGC | 1 cut(s) | 221 |
| PfeI | GAWTC | 2 cut(s) | 648, 1050 |
| PfoI | TCCNGGA | 1 cut(s) | 247 |
| PkrI | GCNGC | 8 cut(s) | 58, 379, 448, 581, 896, 953, 1127, 1159 |
| PleI | GAGTC | 1 cut(s) | 238 |
| PpsI | GAGTC | 1 cut(s) | 238 |
| Psp124BI | GAGCTC | 1 cut(s) | 1182 |
| Psp6I | CCWGG | 3 cut(s) | 247, 1081, 1113 |
| PspFI | CCCAGC | 1 cut(s) | 160 |
| PspGI | CCWGG | 3 cut(s) | 247, 1081, 1113 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 73, 159, 271, 784, 785, 844, 869 |
| PspOMI | GGGCCC | 2 cut(s) | 157, 783 |
| PspPI | GGNCC | 8 cut(s) | 157, 158, 222, 720, 736, 783, 784, 842 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 552, 584 |
| PsuI | RGATCY | 2 cut(s) | 358, 867 |
| RruI | TCGCGA | 1 cut(s) | 342 |
| RsaI | GTAC | 5 cut(s) | 570, 803, 965, 1004, 1025 |
| RsaNI | GTAC | 5 cut(s) | 569, 802, 964, 1003, 1024 |
| SacI | GAGCTC | 1 cut(s) | 1182 |
| SaqAI | TTAA | 2 cut(s) | 44, 1034 |
| SatI | GCNGC | 8 cut(s) | 57, 378, 447, 580, 895, 952, 1126, 1158 |
| Sau3AI | GATC | 4 cut(s) | 28, 358, 867, 1087 |
| Sau96I | GGNCC | 8 cut(s) | 157, 158, 222, 720, 736, 783, 784, 842 |
| ScaI | AGTACT | 1 cut(s) | 965 |
| SchI | GAGTC | 1 cut(s) | 238 |
| ScrFI | CCNGG | 5 cut(s) | 151, 249, 626, 1083, 1115 |
| SduI | GDGCHC | 9 cut(s) | 74, 88, 161, 274, 322, 765, 787, 1065, 1182 |
| SetI | ASST | 7 cut(s) | 565, 695, 725, 777, 940, 1175, 1182 |
| SfaNI | GCATC | 5 cut(s) | 87, 393, 519, 804, 826 |
| SinI | GGWCC | 1 cut(s) | 720 |
| SmlI | CTYRAG | 1 cut(s) | 659 |
| SmoI | CTYRAG | 1 cut(s) | 659 |
| Sse9I | AATT | 3 cut(s) | 41, 298, 1035 |
| SsiI | CCGC | 8 cut(s) | 167, 349, 471, 895, 908, 952, 1105, 1204 |
| SspMI | CTAG | 2 cut(s) | 98, 728 |
| SstI | GAGCTC | 1 cut(s) | 1182 |
| StyD4I | CCNGG | 5 cut(s) | 149, 247, 624, 1081, 1113 |
| TaaI | ACNGT | 2 cut(s) | 206, 1028 |
| TaqI | TCGA | 4 cut(s) | 27, 552, 940, 1065 |
| TasI | AATT | 3 cut(s) | 41, 298, 1035 |
| TatI | WGTACW | 3 cut(s) | 568, 963, 1002 |
| TauI | GCSGC | 2 cut(s) | 897, 954 |
| TfiI | GAWTC | 2 cut(s) | 648, 1050 |
| Tru1I | TTAA | 2 cut(s) | 44, 1034 |
| Tru9I | TTAA | 2 cut(s) | 44, 1034 |
| TscAI | CASTG | 2 cut(s) | 544, 715 |
| TseI | GCWGC | 6 cut(s) | 56, 377, 446, 579, 1125, 1157 |
| TspDTI | ATGAA | 1 cut(s) | 670 |
| TspRI | CASTG | 2 cut(s) | 544, 715 |
| VneI | GTGCAC | 1 cut(s) | 318 |
| VpaK11BI | GGWCC | 1 cut(s) | 720 |
| XbaI | TCTAGA | 1 cut(s) | 97 |
| XceI | RCATGY | 1 cut(s) | 799 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 419 |
| XspI | CTAG | 2 cut(s) | 98, 728 |
| ZrmI | AGTACT | 1 cut(s) | 965 |
| Zsp2I | ATGCAT | 1 cut(s) | 819 |