Plant mobile domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| AciI | CCGC | 3 cut(s) | 82, 139, 313 |
| AclWI | GGATC | 2 cut(s) | 34, 47 |
| AcuI | CTGAAG | 1 cut(s) | 584 |
| AfaI | GTAC | 2 cut(s) | 152, 191 |
| AfeI | AGCGCT | 1 cut(s) | 295 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 271, 479, 480, 553 |
| AgsI | TTSAA | 1 cut(s) | 59 |
| AhlI | ACTAGT | 1 cut(s) | 511 |
| AjnI | CCWGG | 1 cut(s) | 437 |
| AluBI | AGCT | 2 cut(s) | 367, 605 |
| AluI | AGCT | 2 cut(s) | 367, 605 |
| Alw26I | GTCTC | 1 cut(s) | 8 |
| AlwI | GGATC | 2 cut(s) | 34, 47 |
| Ama87I | CYCGRG | 1 cut(s) | 269 |
| Aor51HI | AGCGCT | 1 cut(s) | 295 |
| AoxI | GGCC | 6 cut(s) | 28, 207, 400, 469, 482, 530 |
| ApaI | GGGCCC | 1 cut(s) | 534 |
| ApeKI | GCWGC | 1 cut(s) | 344 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 613, 645 |
| AspLEI | GCGC | 3 cut(s) | 296, 317, 462 |
| AspS9I | GGNCC | 5 cut(s) | 29, 470, 482, 530, 531 |
| AsuC2I | CCSGG | 2 cut(s) | 270, 271 |
| AvaI | CYCGRG | 1 cut(s) | 269 |
| BaeGI | GKGCMC | 2 cut(s) | 378, 534 |
| BamHI | GGATCC | 1 cut(s) | 39 |
| BanII | GRGCYC | 2 cut(s) | 277, 534 |
| BbvI | GCAGC | 1 cut(s) | 331 |
| BccI | CCATC | 2 cut(s) | 547, 646 |
| BciT130I | CCWGG | 1 cut(s) | 439 |
| BciVI | GTATCC | 1 cut(s) | 562 |
| BclI | TGATCA | 1 cut(s) | 112 |
| BcnI | CCSGG | 2 cut(s) | 270, 271 |
| BcoDI | GTCTC | 1 cut(s) | 8 |
| BcuI | ACTAGT | 1 cut(s) | 511 |
| BfaI | CTAG | 3 cut(s) | 221, 251, 512 |
| BfmI | CTRYAG | 1 cut(s) | 283 |
| BfoI | RGCGCY | 1 cut(s) | 297 |
| BfuI | GTATCC | 1 cut(s) | 562 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 399 |
| BisI | GCNGC | 4 cut(s) | 82, 139, 313, 345 |
| BlpI | GCTNAGC | 1 cut(s) | 134 |
| BlsI | GCNGC | 4 cut(s) | 83, 140, 314, 346 |
| Bme1390I | CCNGG | 3 cut(s) | 270, 271, 439 |
| BmeT110I | CYCGRG | 1 cut(s) | 269 |
| BmgT120I | GGNCC | 5 cut(s) | 29, 470, 482, 530, 531 |
| BmiI | GGNNCC | 5 cut(s) | 41, 263, 276, 472, 532 |
| BmrFI | CCNGG | 3 cut(s) | 270, 271, 439 |
| BmrI | ACTGGG | 1 cut(s) | 489 |
| BmsI | GCATC | 2 cut(s) | 164, 424 |
| BmuI | ACTGGG | 1 cut(s) | 489 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 134 |
| BpuMI | CCSGG | 2 cut(s) | 270, 271 |
| BsaAI | YACGTR | 1 cut(s) | 373 |
| BsaJI | CCNNGG | 2 cut(s) | 269, 270 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 469, 499 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 271, 479, 480, 553 |
| Bse118I | RCCGGY | 1 cut(s) | 106 |
| Bse1I | ACTGG | 1 cut(s) | 484 |
| Bse3DI | GCAATG | 1 cut(s) | 583 |
| BseBI | CCWGG | 1 cut(s) | 439 |
| BseDI | CCNNGG | 2 cut(s) | 269, 270 |
| BseGI | GGATG | 3 cut(s) | 155, 558, 624 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 271, 479, 480, 553 |
| BseMI | GCAATG | 1 cut(s) | 583 |
| BseMII | CTCAG | 1 cut(s) | 162 |
| BseNI | ACTGG | 1 cut(s) | 484 |
| BseSI | GKGCMC | 2 cut(s) | 378, 534 |
| BseXI | GCAGC | 1 cut(s) | 331 |
| BseYI | CCCAGC | 1 cut(s) | 605 |
| Bsh1236I | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| BshFI | GGCC | 6 cut(s) | 30, 209, 402, 471, 484, 532 |
| BsiHKCI | CYCGRG | 1 cut(s) | 269 |
| BsiSI | CCGG | 2 cut(s) | 107, 270 |
| BslFI | GGGAC | 1 cut(s) | 623 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 271, 479, 480, 553 |
| BsmAI | GTCTC | 1 cut(s) | 8 |
| BsmFI | GGGAC | 1 cut(s) | 623 |
| BsnI | GGCC | 6 cut(s) | 30, 209, 402, 471, 484, 532 |
| BsoBI | CYCGRG | 1 cut(s) | 269 |
| Bsp120I | GGGCCC | 1 cut(s) | 530 |
| Bsp1286I | GDGCHC | 3 cut(s) | 277, 378, 534 |
| Bsp143I | GATC | 4 cut(s) | 39, 112, 318, 517 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 134 |
| Bsp68I | TCGCGA | 1 cut(s) | 634 |
| BspACI | CCGC | 3 cut(s) | 82, 139, 313 |
| BspANI | GGCC | 6 cut(s) | 30, 209, 402, 471, 484, 532 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspFNI | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| BspLI | GGNNCC | 5 cut(s) | 41, 263, 276, 472, 532 |
| BspPI | GGATC | 2 cut(s) | 34, 47 |
| BsrDI | GCAATG | 1 cut(s) | 583 |
| BsrFI | RCCGGY | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 484 |
| BssAI | RCCGGY | 1 cut(s) | 106 |
| BssECI | CCNNGG | 2 cut(s) | 269, 270 |
| BssMI | GATC | 4 cut(s) | 39, 112, 318, 517 |
| Bst2UI | CCWGG | 1 cut(s) | 439 |
| Bst4CI | ACNGT | 1 cut(s) | 287 |
| Bst6I | CTCTTC | 1 cut(s) | 634 |
| BstBAI | YACGTR | 1 cut(s) | 373 |
| BstC8I | GCNNGC | 4 cut(s) | 342, 391, 503, 507 |
| BstDEI | CTNAG | 4 cut(s) | 121, 134, 171, 356 |
| BstF5I | GGATG | 3 cut(s) | 155, 558, 624 |
| BstFNI | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| BstH2I | RGCGCY | 1 cut(s) | 297 |
| BstHHI | GCGC | 3 cut(s) | 296, 317, 462 |
| BstKTI | GATC | 4 cut(s) | 42, 115, 321, 520 |
| BstMAI | GTCTC | 1 cut(s) | 8 |
| BstMBI | GATC | 4 cut(s) | 39, 112, 318, 517 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 373, 399, 468 |
| BstNI | CCWGG | 1 cut(s) | 439 |
| BstNSI | RCATGY | 1 cut(s) | 505 |
| BstSCI | CCNGG | 3 cut(s) | 268, 269, 437 |
| BstSFI | CTRYAG | 1 cut(s) | 283 |
| BstSLI | GKGCMC | 2 cut(s) | 378, 534 |
| BstUI | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| BstV1I | GCAGC | 1 cut(s) | 331 |
| BstX2I | RGATCY | 1 cut(s) | 39 |
| BstYI | RGATCY | 1 cut(s) | 39 |
| BsuI | GTATCC | 1 cut(s) | 562 |
| BsuRI | GGCC | 6 cut(s) | 30, 209, 402, 471, 484, 532 |
| BtsCI | GGATG | 3 cut(s) | 155, 558, 624 |
| BtsI | GCAGTG | 1 cut(s) | 95 |
| BtsIMutI | CAGTG | 2 cut(s) | 95, 292 |
| BtuMI | TCGCGA | 1 cut(s) | 634 |
| Cac8I | GCNNGC | 4 cut(s) | 342, 391, 503, 507 |
| CfoI | GCGC | 3 cut(s) | 296, 317, 462 |
| Cfr10I | RCCGGY | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 5 cut(s) | 29, 470, 482, 530, 531 |
| Cfr9I | CCCGGG | 1 cut(s) | 269 |
| Csp6I | GTAC | 2 cut(s) | 151, 190 |
| CviAII | CATG | 2 cut(s) | 502, 535 |
| CviQI | GTAC | 2 cut(s) | 151, 190 |
| DdeI | CTNAG | 4 cut(s) | 121, 134, 171, 356 |
| DpnI | GATC | 4 cut(s) | 41, 114, 320, 519 |
| DpnII | GATC | 4 cut(s) | 39, 112, 318, 517 |
| Eam1104I | CTCTTC | 1 cut(s) | 634 |
| EarI | CTCTTC | 1 cut(s) | 634 |
| Eco24I | GRGCYC | 2 cut(s) | 277, 534 |
| Eco47III | AGCGCT | 1 cut(s) | 295 |
| Eco57I | CTGAAG | 1 cut(s) | 584 |
| Eco88I | CYCGRG | 1 cut(s) | 269 |
| EcoRII | CCWGG | 1 cut(s) | 437 |
| EcoT38I | GRGCYC | 2 cut(s) | 277, 534 |
| FaeI | CATG | 2 cut(s) | 505, 538 |
| FaiI | YATR | 7 cut(s) | 73, 90, 184, 363, 432, 503, 536 |
| FaqI | GGGAC | 1 cut(s) | 623 |
| FatI | CATG | 2 cut(s) | 501, 534 |
| FbaI | TGATCA | 1 cut(s) | 112 |
| Fnu4HI | GCNGC | 4 cut(s) | 82, 139, 313, 345 |
| FokI | GGATG | 3 cut(s) | 142, 565, 631 |
| FriOI | GRGCYC | 2 cut(s) | 277, 534 |
| Fsp4HI | GCNGC | 4 cut(s) | 82, 139, 313, 345 |
| FspBI | CTAG | 3 cut(s) | 221, 251, 512 |
| GlaI | GCGC | 3 cut(s) | 295, 316, 461 |
| GluI | GCNGC | 4 cut(s) | 82, 139, 313, 345 |
| GsaI | CCCAGC | 1 cut(s) | 609 |
| HaeII | RGCGCY | 1 cut(s) | 297 |
| HaeIII | GGCC | 6 cut(s) | 30, 209, 402, 471, 484, 532 |
| HapII | CCGG | 2 cut(s) | 107, 270 |
| HhaI | GCGC | 3 cut(s) | 296, 317, 462 |
| Hin1II | CATG | 2 cut(s) | 505, 538 |
| Hin6I | GCGC | 3 cut(s) | 294, 315, 460 |
| HinP1I | GCGC | 3 cut(s) | 294, 315, 460 |
| HincII | GTYRAC | 1 cut(s) | 600 |
| HindII | GTYRAC | 1 cut(s) | 600 |
| HinfI | GANTC | 2 cut(s) | 55, 237 |
| HpaII | CCGG | 2 cut(s) | 107, 270 |
| Hpy166II | GTNNAC | 1 cut(s) | 600 |
| Hpy188I | TCNGA | 4 cut(s) | 172, 198, 331, 588 |
| Hpy188III | TCNNGA | 3 cut(s) | 52, 278, 633 |
| Hpy8I | GTNNAC | 1 cut(s) | 600 |
| HpyAV | CCTTC | 4 cut(s) | 170, 203, 275, 559 |
| HpyCH4III | ACNGT | 1 cut(s) | 287 |
| HpyCH4IV | ACGT | 1 cut(s) | 372 |
| HpyCH4V | TGCA | 3 cut(s) | 216, 509, 646 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 373, 399, 468 |
| HpyF3I | CTNAG | 4 cut(s) | 121, 134, 171, 356 |
| HpySE526I | ACGT | 1 cut(s) | 372 |
| Hsp92II | CATG | 2 cut(s) | 505, 538 |
| HspAI | GCGC | 3 cut(s) | 294, 315, 460 |
| Ksp22I | TGATCA | 1 cut(s) | 112 |
| Kzo9I | GATC | 4 cut(s) | 39, 112, 318, 517 |
| LmnI | GCTCC | 1 cut(s) | 280 |
| Lsp1109I | GCAGC | 1 cut(s) | 331 |
| LweI | GCATC | 2 cut(s) | 164, 424 |
| MaeI | CTAG | 3 cut(s) | 221, 251, 512 |
| MaeII | ACGT | 1 cut(s) | 372 |
| MaeIII | GTNAC | 1 cut(s) | 415 |
| MalI | GATC | 4 cut(s) | 41, 114, 320, 519 |
| MboI | GATC | 4 cut(s) | 39, 112, 318, 517 |
| MboII | GAAGA | 2 cut(s) | 246, 621 |
| MflI | RGATCY | 1 cut(s) | 39 |
| MhlI | GDGCHC | 3 cut(s) | 277, 378, 534 |
| MluCI | AATT | 3 cut(s) | 395, 410, 465 |
| MnlI | CCTC | 5 cut(s) | 53, 136, 255, 413, 495 |
| MslI | CAYNNNNRTG | 1 cut(s) | 547 |
| MspA1I | CMGCKG | 1 cut(s) | 605 |
| MspI | CCGG | 2 cut(s) | 107, 270 |
| MspR9I | CCNGG | 3 cut(s) | 270, 271, 439 |
| MvaI | CCWGG | 1 cut(s) | 439 |
| MvnI | CGCG | 5 cut(s) | 84, 141, 315, 317, 634 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 373, 399, 468 |
| NciI | CCSGG | 2 cut(s) | 270, 271 |
| NdeII | GATC | 4 cut(s) | 39, 112, 318, 517 |
| NlaIII | CATG | 2 cut(s) | 505, 538 |
| NlaIV | GGNNCC | 5 cut(s) | 41, 263, 276, 472, 532 |
| NruI | TCGCGA | 1 cut(s) | 634 |
| NspI | RCATGY | 1 cut(s) | 505 |
| PaeI | GCATGC | 1 cut(s) | 505 |
| PfeI | GAWTC | 2 cut(s) | 55, 237 |
| PkrI | GCNGC | 4 cut(s) | 83, 140, 314, 346 |
| Ppu21I | YACGTR | 1 cut(s) | 373 |
| Psp6I | CCWGG | 1 cut(s) | 437 |
| PspFI | CCCAGC | 1 cut(s) | 605 |
| PspGI | CCWGG | 1 cut(s) | 437 |
| PspN4I | GGNNCC | 5 cut(s) | 41, 263, 276, 472, 532 |
| PspOMI | GGGCCC | 1 cut(s) | 530 |
| PspPI | GGNCC | 5 cut(s) | 29, 470, 482, 530, 531 |
| PsuI | RGATCY | 1 cut(s) | 39 |
| PvuII | CAGCTG | 1 cut(s) | 605 |
| RruI | TCGCGA | 1 cut(s) | 634 |
| RsaI | GTAC | 2 cut(s) | 152, 191 |
| RsaNI | GTAC | 2 cut(s) | 151, 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 547 |
| SatI | GCNGC | 4 cut(s) | 82, 139, 313, 345 |
| Sau3AI | GATC | 4 cut(s) | 39, 112, 318, 517 |
| Sau96I | GGNCC | 5 cut(s) | 29, 470, 482, 530, 531 |
| ScrFI | CCNGG | 3 cut(s) | 270, 271, 439 |
| SduI | GDGCHC | 3 cut(s) | 277, 378, 534 |
| SetI | ASST | 8 cut(s) | 127, 152, 195, 222, 247, 369, 375, 607 |
| SfaNI | GCATC | 2 cut(s) | 164, 424 |
| SfcI | CTRYAG | 1 cut(s) | 283 |
| SmaI | CCCGGG | 1 cut(s) | 271 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 547 |
| SpeI | ACTAGT | 1 cut(s) | 511 |
| SphI | GCATGC | 1 cut(s) | 505 |
| Sse9I | AATT | 3 cut(s) | 395, 410, 465 |
| SsiI | CCGC | 3 cut(s) | 82, 139, 313 |
| SspMI | CTAG | 3 cut(s) | 221, 251, 512 |
| StyD4I | CCNGG | 3 cut(s) | 268, 269, 437 |
| TaaI | ACNGT | 1 cut(s) | 287 |
| TaiI | ACGT | 1 cut(s) | 375 |
| TaqI | TCGA | 1 cut(s) | 45 |
| TasI | AATT | 3 cut(s) | 395, 410, 465 |
| TauI | GCSGC | 3 cut(s) | 84, 141, 315 |
| TfiI | GAWTC | 2 cut(s) | 55, 237 |
| TscAI | CASTG | 2 cut(s) | 102, 292 |
| TseI | GCWGC | 1 cut(s) | 344 |
| TspDTI | ATGAA | 2 cut(s) | 216, 366 |
| TspMI | CCCGGG | 1 cut(s) | 269 |
| TspRI | CASTG | 2 cut(s) | 102, 292 |
| XceI | RCATGY | 1 cut(s) | 505 |
| XmaI | CCCGGG | 1 cut(s) | 269 |
| XspI | CTAG | 3 cut(s) | 221, 251, 512 |