Plant mobile domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1702 |
| Acc36I | ACCTGC | 1 cut(s) | 266 |
| AccB1I | GGYRCC | 3 cut(s) | 83, 163, 722 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1571 |
| AccBSI | CCGCTC | 1 cut(s) | 337 |
| AccI | GTMKAC | 1 cut(s) | 220 |
| AclWI | GGATC | 4 cut(s) | 787, 800, 1037, 1697 |
| AcoI | YGGCCR | 3 cut(s) | 394, 469, 1599 |
| AcuI | CTGAAG | 1 cut(s) | 1473 |
| AcyI | GRCGYC | 2 cut(s) | 164, 723 |
| AfaI | GTAC | 4 cut(s) | 605, 736, 905, 944 |
| AgeI | ACCGGT | 1 cut(s) | 512 |
| AgsI | TTSAA | 7 cut(s) | 498, 812, 1007, 1201, 1400, 1646, 1652 |
| AjnI | CCWGG | 3 cut(s) | 744, 1190, 1518 |
| AluBI | AGCT | 5 cut(s) | 522, 534, 998, 1120, 1505 |
| AluI | AGCT | 5 cut(s) | 522, 534, 998, 1120, 1505 |
| Alw21I | GWGCWC | 2 cut(s) | 573, 1507 |
| Alw26I | GTCTC | 3 cut(s) | 109, 761, 1351 |
| AlwI | GGATC | 4 cut(s) | 787, 800, 1037, 1697 |
| Ama87I | CYCGRG | 1 cut(s) | 1022 |
| ApeKI | GCWGC | 4 cut(s) | 519, 531, 1065, 1097 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1367, 1399 |
| AseI | ATTAAT | 1 cut(s) | 294 |
| AsiGI | ACCGGT | 1 cut(s) | 512 |
| AspLEI | GCGC | 8 cut(s) | 166, 250, 725, 1051, 1053, 1215, 1444, 1446 |
| AspS9I | GGNCC | 8 cut(s) | 158, 505, 653, 676, 688, 782, 1223, 1235 |
| AsuC2I | CCSGG | 1 cut(s) | 893 |
| AsuHPI | GGTGA | 5 cut(s) | 274, 400, 418, 478, 1052 |
| AvaI | CYCGRG | 1 cut(s) | 1022 |
| AvaII | GGWCC | 2 cut(s) | 158, 653 |
| BaeGI | GKGCMC | 1 cut(s) | 88 |
| BalI | TGGCCA | 2 cut(s) | 396, 471 |
| BamHI | GGATCC | 1 cut(s) | 792 |
| BanI | GGYRCC | 3 cut(s) | 83, 163, 722 |
| BanII | GRGCYC | 4 cut(s) | 1030, 1131, 1507, 1545 |
| BbsI | GAAGAC | 1 cut(s) | 1659 |
| Bbv12I | GWGCWC | 2 cut(s) | 573, 1507 |
| BbvI | GCAGC | 4 cut(s) | 531, 543, 1052, 1084 |
| BccI | CCATC | 7 cut(s) | 185, 443, 452, 491, 1301, 1400, 1630 |
| BceAI | ACGGC | 3 cut(s) | 334, 690, 1598 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 176, 210 |
| BciT130I | CCWGG | 3 cut(s) | 746, 1192, 1520 |
| BciVI | GTATCC | 1 cut(s) | 1316 |
| BclI | TGATCA | 1 cut(s) | 865 |
| BcnI | CCSGG | 1 cut(s) | 893 |
| BcoDI | GTCTC | 3 cut(s) | 109, 761, 1351 |
| BfaI | CTAG | 4 cut(s) | 416, 435, 974, 1514 |
| BfoI | RGCGCY | 2 cut(s) | 167, 726 |
| BfuAI | ACCTGC | 1 cut(s) | 266 |
| BfuI | GTATCC | 1 cut(s) | 1316 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1152 |
| BglII | AGATCT | 1 cut(s) | 253 |
| BlpI | GCTNAGC | 1 cut(s) | 887 |
| BmcAI | AGTACT | 1 cut(s) | 605 |
| Bme1390I | CCNGG | 4 cut(s) | 746, 893, 1192, 1520 |
| Bme18I | GGWCC | 2 cut(s) | 158, 653 |
| BmeT110I | CYCGRG | 1 cut(s) | 1022 |
| BmgT120I | GGNCC | 8 cut(s) | 158, 505, 653, 676, 688, 782, 1223, 1235 |
| BmrFI | CCNGG | 4 cut(s) | 746, 893, 1192, 1520 |
| BmrI | ACTGGG | 3 cut(s) | 164, 1242, 1291 |
| BmsI | GCATC | 5 cut(s) | 178, 414, 766, 1177, 1411 |
| BmuI | ACTGGG | 3 cut(s) | 164, 1242, 1291 |
| BpiI | GAAGAC | 1 cut(s) | 1659 |
| BpmI | CTGGAG | 1 cut(s) | 620 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 887 |
| BpuEI | CTTGAG | 1 cut(s) | 1533 |
| BpuMI | CCSGG | 1 cut(s) | 893 |
| Bsa29I | ATCGAT | 2 cut(s) | 27, 447 |
| BsaHI | GRCGYC | 2 cut(s) | 164, 723 |
| BsaI | GGTCTC | 1 cut(s) | 109 |
| BsaJI | CCNNGG | 4 cut(s) | 167, 501, 542, 656 |
| BsaWI | WCCGGW | 1 cut(s) | 512 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 518, 548, 887, 898, 917, 928, 1222, 1252 |
| Bse118I | RCCGGY | 2 cut(s) | 512, 1483 |
| Bse1I | ACTGG | 8 cut(s) | 159, 611, 655, 713, 1237, 1269, 1286, 1609 |
| Bse3DI | GCAATG | 1 cut(s) | 1337 |
| BseBI | CCWGG | 3 cut(s) | 746, 1192, 1520 |
| BseCI | ATCGAT | 2 cut(s) | 27, 447 |
| BseDI | CCNNGG | 4 cut(s) | 167, 501, 542, 656 |
| BseGI | GGATG | 7 cut(s) | 96, 177, 757, 908, 1158, 1312, 1378 |
| BseMI | GCAATG | 1 cut(s) | 1337 |
| BseMII | CTCAG | 3 cut(s) | 915, 1008, 1422 |
| BseNI | ACTGG | 8 cut(s) | 159, 611, 655, 713, 1237, 1269, 1286, 1609 |
| BsePI | GCGCGC | 2 cut(s) | 1049, 1442 |
| BseRI | GAGGAG | 2 cut(s) | 50, 1648 |
| BseSI | GKGCMC | 1 cut(s) | 88 |
| BseXI | GCAGC | 4 cut(s) | 531, 543, 1052, 1084 |
| BseYI | CCCAGC | 2 cut(s) | 1359, 1523 |
| BsgI | GTGCAG | 1 cut(s) | 613 |
| Bsh1285I | CGRYCG | 1 cut(s) | 517 |
| BshNI | GGYRCC | 3 cut(s) | 83, 163, 722 |
| BshTI | ACCGGT | 1 cut(s) | 512 |
| BshVI | ATCGAT | 2 cut(s) | 27, 447 |
| BsiEI | CGRYCG | 1 cut(s) | 517 |
| BsiHKAI | GWGCWC | 2 cut(s) | 573, 1507 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1022 |
| BsiSI | CCGG | 5 cut(s) | 161, 513, 892, 1484, 1598 |
| BslFI | GGGAC | 1 cut(s) | 1377 |
| BsmAI | GTCTC | 3 cut(s) | 109, 761, 1351 |
| BsmFI | GGGAC | 1 cut(s) | 1377 |
| Bso31I | GGTCTC | 1 cut(s) | 109 |
| BsoBI | CYCGRG | 1 cut(s) | 1022 |
| Bsp1286I | GDGCHC | 6 cut(s) | 88, 573, 1030, 1131, 1507, 1545 |
| Bsp143I | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 887 |
| Bsp19I | CCATGG | 1 cut(s) | 501 |
| Bsp68I | TCGCGA | 3 cut(s) | 237, 1388, 1539 |
| BspCNI | CTCAG | 3 cut(s) | 916, 1007, 1423 |
| BspDI | ATCGAT | 2 cut(s) | 27, 447 |
| BspMI | ACCTGC | 1 cut(s) | 266 |
| BspPI | GGATC | 4 cut(s) | 787, 800, 1037, 1697 |
| BspQI | GCTCTTC | 1 cut(s) | 234 |
| BspT107I | GGYRCC | 3 cut(s) | 83, 163, 722 |
| BspTNI | GGTCTC | 1 cut(s) | 109 |
| BsrBI | CCGCTC | 1 cut(s) | 337 |
| BsrDI | GCAATG | 1 cut(s) | 1337 |
| BsrFI | RCCGGY | 2 cut(s) | 512, 1483 |
| BsrI | ACTGG | 8 cut(s) | 159, 611, 655, 713, 1237, 1269, 1286, 1609 |
| BssAI | RCCGGY | 2 cut(s) | 512, 1483 |
| BssECI | CCNNGG | 4 cut(s) | 167, 501, 542, 656 |
| BssHII | GCGCGC | 2 cut(s) | 1049, 1442 |
| BssMI | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| BssNI | GRCGYC | 2 cut(s) | 164, 723 |
| BssT1I | CCWWGG | 2 cut(s) | 501, 656 |
| Bst2UI | CCWGG | 3 cut(s) | 746, 1192, 1520 |
| Bst4CI | ACNGT | 3 cut(s) | 734, 1040, 1684 |
| Bst6I | CTCTTC | 3 cut(s) | 234, 1388, 1666 |
| BstACI | GRCGYC | 2 cut(s) | 164, 723 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 958, 1589 |
| BstDEI | CTNAG | 7 cut(s) | 128, 874, 887, 924, 994, 1109, 1431 |
| BstDSI | CCRYGG | 3 cut(s) | 167, 501, 542 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 683, 1517 |
| BstF5I | GGATG | 7 cut(s) | 96, 177, 757, 908, 1158, 1312, 1378 |
| BstH2I | RGCGCY | 2 cut(s) | 167, 726 |
| BstHHI | GCGC | 8 cut(s) | 166, 250, 725, 1051, 1053, 1215, 1444, 1446 |
| BstKTI | GATC | 8 cut(s) | 31, 256, 795, 868, 1045, 1074, 1273, 1692 |
| BstMAI | GTCTC | 3 cut(s) | 109, 761, 1351 |
| BstMBI | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| BstMCI | CGRYCG | 1 cut(s) | 517 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 327, 402, 528, 958, 1126, 1152, 1221, 1589, 1598 |
| BstNI | CCWGG | 3 cut(s) | 746, 1192, 1520 |
| BstNSI | RCATGY | 2 cut(s) | 1057, 1258 |
| BstSCI | CCNGG | 4 cut(s) | 744, 891, 1190, 1518 |
| BstSLI | GKGCMC | 1 cut(s) | 88 |
| BstV1I | GCAGC | 4 cut(s) | 531, 543, 1052, 1084 |
| BstV2I | GAAGAC | 1 cut(s) | 1659 |
| BstX2I | RGATCY | 3 cut(s) | 253, 792, 1689 |
| BstYI | RGATCY | 3 cut(s) | 253, 792, 1689 |
| Bsu15I | ATCGAT | 2 cut(s) | 27, 447 |
| BsuI | GTATCC | 1 cut(s) | 1316 |
| BsuTUI | ATCGAT | 2 cut(s) | 27, 447 |
| BtgI | CCRYGG | 3 cut(s) | 167, 501, 542 |
| BtsCI | GGATG | 7 cut(s) | 96, 177, 757, 908, 1158, 1312, 1378 |
| BtsI | GCAGTG | 1 cut(s) | 848 |
| BtsIMutI | CAGTG | 5 cut(s) | 648, 720, 848, 1262, 1602 |
| BtuMI | TCGCGA | 3 cut(s) | 237, 1388, 1539 |
| BveI | ACCTGC | 1 cut(s) | 266 |
| CfoI | GCGC | 8 cut(s) | 166, 250, 725, 1051, 1053, 1215, 1444, 1446 |
| Cfr10I | RCCGGY | 2 cut(s) | 512, 1483 |
| Cfr13I | GGNCC | 8 cut(s) | 158, 505, 653, 676, 688, 782, 1223, 1235 |
| Cfr42I | CCGCGG | 2 cut(s) | 170, 545 |
| ClaI | ATCGAT | 2 cut(s) | 27, 447 |
| Csp6I | GTAC | 4 cut(s) | 604, 735, 904, 943 |
| CspAI | ACCGGT | 1 cut(s) | 512 |
| CviAII | CATG | 8 cut(s) | 146, 467, 502, 754, 953, 1054, 1255, 1509 |
| CviQI | GTAC | 4 cut(s) | 604, 735, 904, 943 |
| DdeI | CTNAG | 7 cut(s) | 128, 874, 887, 924, 994, 1109, 1431 |
| DinI | GGCGCC | 2 cut(s) | 165, 724 |
| DpnI | GATC | 8 cut(s) | 30, 255, 794, 867, 1044, 1073, 1272, 1691 |
| DpnII | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| EaeI | YGGCCR | 3 cut(s) | 394, 469, 1599 |
| Eam1104I | CTCTTC | 3 cut(s) | 234, 1388, 1666 |
| EarI | CTCTTC | 3 cut(s) | 234, 1388, 1666 |
| Ecl136II | GAGCTC | 1 cut(s) | 1505 |
| Eco130I | CCWWGG | 2 cut(s) | 501, 656 |
| Eco24I | GRGCYC | 4 cut(s) | 1030, 1131, 1507, 1545 |
| Eco31I | GGTCTC | 1 cut(s) | 109 |
| Eco32I | GATATC | 1 cut(s) | 421 |
| Eco47I | GGWCC | 2 cut(s) | 158, 653 |
| Eco53kI | GAGCTC | 1 cut(s) | 1505 |
| Eco57I | CTGAAG | 1 cut(s) | 1473 |
| Eco88I | CYCGRG | 1 cut(s) | 1022 |
| EcoICRI | GAGCTC | 1 cut(s) | 1505 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 683, 1517 |
| EcoRII | CCWGG | 3 cut(s) | 744, 1190, 1518 |
| EcoRV | GATATC | 1 cut(s) | 421 |
| EcoT14I | CCWWGG | 2 cut(s) | 501, 656 |
| EcoT22I | ATGCAT | 1 cut(s) | 759 |
| EcoT38I | GRGCYC | 4 cut(s) | 1030, 1131, 1507, 1545 |
| EgeI | GGCGCC | 2 cut(s) | 165, 724 |
| EheI | GGCGCC | 2 cut(s) | 165, 724 |
| ErhI | CCWWGG | 2 cut(s) | 501, 656 |
| FaeI | CATG | 8 cut(s) | 149, 470, 505, 757, 956, 1057, 1258, 1512 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 608, 640 |
| FaqI | GGGAC | 1 cut(s) | 1377 |
| FatI | CATG | 8 cut(s) | 145, 466, 501, 753, 952, 1053, 1254, 1508 |
| FauI | CCCGC | 6 cut(s) | 95, 162, 190, 321, 1054, 1504 |
| FbaI | TGATCA | 1 cut(s) | 865 |
| FblI | GTMKAC | 1 cut(s) | 220 |
| FokI | GGATG | 7 cut(s) | 83, 164, 744, 895, 1145, 1319, 1385 |
| FriOI | GRGCYC | 4 cut(s) | 1030, 1131, 1507, 1545 |
| FspBI | CTAG | 4 cut(s) | 416, 435, 974, 1514 |
| GlaI | GCGC | 8 cut(s) | 165, 249, 724, 1050, 1052, 1214, 1443, 1445 |
| GsaI | CCCAGC | 2 cut(s) | 1363, 1527 |
| GsuI | CTGGAG | 1 cut(s) | 620 |
| HaeII | RGCGCY | 2 cut(s) | 167, 726 |
| HapII | CCGG | 5 cut(s) | 161, 513, 892, 1484, 1598 |
| HhaI | GCGC | 8 cut(s) | 166, 250, 725, 1051, 1053, 1215, 1444, 1446 |
| Hin1I | GRCGYC | 2 cut(s) | 164, 723 |
| Hin1II | CATG | 8 cut(s) | 149, 470, 505, 757, 956, 1057, 1258, 1512 |
| Hin6I | GCGC | 8 cut(s) | 164, 248, 723, 1049, 1051, 1213, 1442, 1444 |
| HinP1I | GCGC | 8 cut(s) | 164, 248, 723, 1049, 1051, 1213, 1442, 1444 |
| HincII | GTYRAC | 2 cut(s) | 221, 1354 |
| HindII | GTYRAC | 2 cut(s) | 221, 1354 |
| HinfI | GANTC | 8 cut(s) | 173, 455, 479, 588, 702, 808, 990, 1655 |
| HpaII | CCGG | 5 cut(s) | 161, 513, 892, 1484, 1598 |
| HphI | GGTGA | 5 cut(s) | 274, 400, 418, 478, 1052 |
| Hpy166II | GTNNAC | 3 cut(s) | 221, 906, 1354 |
| Hpy188I | TCNGA | 6 cut(s) | 152, 707, 925, 1084, 1342, 1666 |
| Hpy8I | GTNNAC | 3 cut(s) | 221, 906, 1354 |
| Hpy99I | CGWCG | 1 cut(s) | 222 |
| HpyAV | CCTTC | 4 cut(s) | 388, 956, 1028, 1578 |
| HpyCH4III | ACNGT | 3 cut(s) | 734, 1040, 1684 |
| HpyCH4V | TGCA | 6 cut(s) | 466, 615, 630, 757, 952, 1262 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 327, 402, 528, 958, 1126, 1152, 1221, 1589, 1598 |
| HpyF3I | CTNAG | 7 cut(s) | 128, 874, 887, 924, 994, 1109, 1431 |
| Hsp92I | GRCGYC | 2 cut(s) | 164, 723 |
| Hsp92II | CATG | 8 cut(s) | 149, 470, 505, 757, 956, 1057, 1258, 1512 |
| HspAI | GCGC | 8 cut(s) | 164, 248, 723, 1049, 1051, 1213, 1442, 1444 |
| KasI | GGCGCC | 2 cut(s) | 163, 722 |
| Ksp22I | TGATCA | 1 cut(s) | 865 |
| KspI | CCGCGG | 2 cut(s) | 170, 545 |
| Kzo9I | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| LguI | GCTCTTC | 1 cut(s) | 234 |
| LmnI | GCTCC | 7 cut(s) | 10, 138, 539, 1003, 1033, 1492, 1510 |
| Lsp1109I | GCAGC | 4 cut(s) | 531, 543, 1052, 1084 |
| LweI | GCATC | 5 cut(s) | 178, 414, 766, 1177, 1411 |
| MaeI | CTAG | 4 cut(s) | 416, 435, 974, 1514 |
| MaeIII | GTNAC | 3 cut(s) | 92, 1112, 1577 |
| MalI | GATC | 8 cut(s) | 30, 255, 794, 867, 1044, 1073, 1272, 1691 |
| MbiI | CCGCTC | 1 cut(s) | 337 |
| MboI | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| MboII | GAAGA | 9 cut(s) | 251, 415, 616, 999, 1375, 1412, 1466, 1653, 1664 |
| MflI | RGATCY | 3 cut(s) | 253, 792, 1689 |
| MhlI | GDGCHC | 6 cut(s) | 88, 573, 1030, 1131, 1507, 1545 |
| MlsI | TGGCCA | 2 cut(s) | 396, 471 |
| MluCI | AATT | 4 cut(s) | 473, 1148, 1163, 1218 |
| MluNI | TGGCCA | 2 cut(s) | 396, 471 |
| Mly113I | GGCGCC | 2 cut(s) | 164, 723 |
| MlyI | GAGTC | 4 cut(s) | 464, 473, 696, 1649 |
| MmeI | TCCRAC | 1 cut(s) | 130 |
| Mox20I | TGGCCA | 2 cut(s) | 396, 471 |
| Mph1103I | ATGCAT | 1 cut(s) | 759 |
| MscI | TGGCCA | 2 cut(s) | 396, 471 |
| MseI | TTAA | 2 cut(s) | 294, 1587 |
| Msp20I | TGGCCA | 2 cut(s) | 396, 471 |
| MspA1I | CMGCKG | 3 cut(s) | 90, 169, 544 |
| MspI | CCGG | 5 cut(s) | 161, 513, 892, 1484, 1598 |
| MspR9I | CCNGG | 4 cut(s) | 746, 893, 1192, 1520 |
| MvaI | CCWGG | 3 cut(s) | 746, 1192, 1520 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 327, 402, 528, 958, 1126, 1152, 1221, 1589, 1598 |
| NarI | GGCGCC | 2 cut(s) | 164, 723 |
| NciI | CCSGG | 1 cut(s) | 893 |
| NcoI | CCATGG | 1 cut(s) | 501 |
| NdeII | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| NlaIII | CATG | 8 cut(s) | 149, 470, 505, 757, 956, 1057, 1258, 1512 |
| NmuCI | GTSAC | 2 cut(s) | 92, 1577 |
| NruI | TCGCGA | 3 cut(s) | 237, 1388, 1539 |
| NsiI | ATGCAT | 1 cut(s) | 759 |
| NspI | RCATGY | 2 cut(s) | 1057, 1258 |
| PauI | GCGCGC | 2 cut(s) | 1049, 1442 |
| PciSI | GCTCTTC | 1 cut(s) | 234 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 241, 1122 |
| PfeI | GAWTC | 4 cut(s) | 173, 588, 808, 990 |
| PflFI | GACNNNGTC | 2 cut(s) | 156, 1283 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1571 |
| PinAI | ACCGGT | 1 cut(s) | 512 |
| PleI | GAGTC | 4 cut(s) | 463, 473, 696, 1649 |
| PluTI | GGCGCC | 2 cut(s) | 167, 726 |
| PpsI | GAGTC | 4 cut(s) | 463, 473, 696, 1649 |
| PshBI | ATTAAT | 1 cut(s) | 294 |
| PsiI | TTATAA | 1 cut(s) | 1702 |
| Psp124BI | GAGCTC | 1 cut(s) | 1507 |
| Psp6I | CCWGG | 3 cut(s) | 744, 1190, 1518 |
| PspFI | CCCAGC | 2 cut(s) | 1359, 1523 |
| PspGI | CCWGG | 3 cut(s) | 744, 1190, 1518 |
| PspPI | GGNCC | 8 cut(s) | 158, 505, 653, 676, 688, 782, 1223, 1235 |
| PsuI | RGATCY | 3 cut(s) | 253, 792, 1689 |
| PsyI | GACNNNGTC | 2 cut(s) | 156, 1283 |
| PteI | GCGCGC | 2 cut(s) | 1049, 1442 |
| RruI | TCGCGA | 3 cut(s) | 237, 1388, 1539 |
| RsaI | GTAC | 4 cut(s) | 605, 736, 905, 944 |
| RsaNI | GTAC | 4 cut(s) | 604, 735, 904, 943 |
| SacI | GAGCTC | 1 cut(s) | 1507 |
| SacII | CCGCGG | 2 cut(s) | 170, 545 |
| SalI | GTCGAC | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 234 |
| SaqAI | TTAA | 2 cut(s) | 294, 1587 |
| Sau3AI | GATC | 8 cut(s) | 28, 253, 792, 865, 1042, 1071, 1270, 1689 |
| Sau96I | GGNCC | 8 cut(s) | 158, 505, 653, 676, 688, 782, 1223, 1235 |
| ScaI | AGTACT | 1 cut(s) | 605 |
| SchI | GAGTC | 4 cut(s) | 464, 473, 696, 1649 |
| ScrFI | CCNGG | 4 cut(s) | 746, 893, 1192, 1520 |
| SduI | GDGCHC | 6 cut(s) | 88, 573, 1030, 1131, 1507, 1545 |
| SfaNI | GCATC | 5 cut(s) | 178, 414, 766, 1177, 1411 |
| SfoI | GGCGCC | 2 cut(s) | 165, 724 |
| Sfr303I | CCGCGG | 2 cut(s) | 170, 545 |
| SgrBI | CCGCGG | 2 cut(s) | 170, 545 |
| SinI | GGWCC | 2 cut(s) | 158, 653 |
| SmlI | CTYRAG | 1 cut(s) | 1548 |
| SmoI | CTYRAG | 1 cut(s) | 1548 |
| Sse9I | AATT | 4 cut(s) | 473, 1148, 1163, 1218 |
| SspDI | GGCGCC | 2 cut(s) | 163, 722 |
| SspMI | CTAG | 4 cut(s) | 416, 435, 974, 1514 |
| SstI | GAGCTC | 1 cut(s) | 1507 |
| StyD4I | CCNGG | 4 cut(s) | 744, 891, 1190, 1518 |
| StyI | CCWWGG | 2 cut(s) | 501, 656 |
| TaaI | ACNGT | 3 cut(s) | 734, 1040, 1684 |
| TaqI | TCGA | 7 cut(s) | 27, 220, 381, 388, 447, 477, 798 |
| TasI | AATT | 4 cut(s) | 473, 1148, 1163, 1218 |
| TatI | WGTACW | 1 cut(s) | 603 |
| TauI | GCSGC | 9 cut(s) | 59, 169, 275, 324, 337, 344, 693, 696, 837 |
| TfiI | GAWTC | 4 cut(s) | 173, 588, 808, 990 |
| Tru1I | TTAA | 2 cut(s) | 294, 1587 |
| Tru9I | TTAA | 2 cut(s) | 294, 1587 |
| TscAI | CASTG | 5 cut(s) | 655, 720, 855, 1269, 1609 |
| TseFI | GTSAC | 2 cut(s) | 92, 1577 |
| TseI | GCWGC | 4 cut(s) | 519, 531, 1065, 1097 |
| Tsp45I | GTSAC | 2 cut(s) | 92, 1577 |
| TspDTI | ATGAA | 3 cut(s) | 610, 969, 1119 |
| TspGWI | ACGGA | 1 cut(s) | 219 |
| TspRI | CASTG | 5 cut(s) | 655, 720, 855, 1269, 1609 |
| Tth111I | GACNNNGTC | 2 cut(s) | 156, 1283 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1571 |
| VpaK11BI | GGWCC | 2 cut(s) | 158, 653 |
| VspI | ATTAAT | 1 cut(s) | 294 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 683, 1517 |
| XceI | RCATGY | 2 cut(s) | 1057, 1258 |
| XmiI | GTMKAC | 1 cut(s) | 220 |
| XspI | CTAG | 4 cut(s) | 416, 435, 974, 1514 |
| ZrmI | AGTACT | 1 cut(s) | 605 |
| Zsp2I | ATGCAT | 1 cut(s) | 759 |